Difference between revisions of "NONHSAT029017"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>taacagttggtggaggctggtcgctaggggaaccaacaatgtgattggagggttggaactttcagcctcactccgtgacttcctggaaggggagaggtactgaggttgagtctatccccaatggccaatgatgtcatcaatcatgcctaaataatgaagcctccataaaaactcaaaaggatgggatttggagaacttctggaatgctgagcatgtggaggtgcctggagagggcatggaagctccacatgcctgcccacatactttgcactgtgcatcccttccatctggctgttcatctgCATTGTGAGAACAAGCTCATTCTTGTACCTTTCCTCCGTGGATTTGGTGATCACAACAAGGGACTTATCCATCATTGGAGTGGCCACAATCTGAACAAGTTCCACCCACTGCCTGAGAGTCCTGCCCTGAATTTTAGACTTTGATCATAAAAAAATGGATAATATAATTTAACAGTGAATAAATTAGATATCAATGAAGT</dnaseq>| | sequence = <dnaseq>taacagttggtggaggctggtcgctaggggaaccaacaatgtgattggagggttggaactttcagcctcactccgtgacttcctggaaggggagaggtactgaggttgagtctatccccaatggccaatgatgtcatcaatcatgcctaaataatgaagcctccataaaaactcaaaaggatgggatttggagaacttctggaatgctgagcatgtggaggtgcctggagagggcatggaagctccacatgcctgcccacatactttgcactgtgcatcccttccatctggctgttcatctgCATTGTGAGAACAAGCTCATTCTTGTACCTTTCCTCCGTGGATTTGGTGATCACAACAAGGGACTTATCCATCATTGGAGTGGCCACAATCTGAACAAGTTCCACCCACTGCCTGAGAGTCCTGCCCTGAATTTTAGACTTTGATCATAAAAAAATGGATAATATAATTTAACAGTGAATAAATTAGATATCAATGAAGT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG011467]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:04, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT029017 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
502 nt |
| Genomic location |
chr12-:58488695..58491865 |
| Exon number |
2 |
| Exons |
58488695..58488894,58491564..58491865 |
| Genome context |
|
| Sequence |
000001 taacagttgg tggaggctgg tcgctagggg aaccaacaat gtgattggag ggttggaact ttcagcctca ctccgtgact 000080
000081 tcctggaagg ggagaggtac tgaggttgag tctatcccca atggccaatg atgtcatcaa tcatgcctaa ataatgaagc 000160 000161 ctccataaaa actcaaaagg atgggatttg gagaacttct ggaatgctga gcatgtggag gtgcctggag agggcatgga 000240 000241 agctccacat gcctgcccac atactttgca ctgtgcatcc cttccatctg gctgttcatc tgCATTGTGA GAACAAGCTC 000320 000321 ATTCTTGTAC CTTTCCTCCG TGGATTTGGT GATCACAACA AGGGACTTAT CCATCATTGG AGTGGCCACA ATCTGAACAA 000400 000401 GTTCCACCCA CTGCCTGAGA GTCCTGCCCT GAATTTTAGA CTTTGATCAT AAAAAAATGG ATAATATAAT TTAACAGTGA 000480 000481 ATAAATTAGA TATCAATGAA GT |
Predicted Small Protein
| Name | NONHSAT029017_smProtein_203:445 |
| Length | 81 |
| Molecular weight | 9413.0534 |
| Aromaticity | 0.1 |
| Instability index | 67.16 |
| Isoelectric point | 9.41680908203 |
| Runs | 13 |
| Runs residual | 0.0236842105263 |
| Runs probability | 0.0366814778579 |
| Amino acid sequence | MLSMWRCLERAWKLHMPAHILCTVHPFHLAVHLHCENKLILVPFLRGFGDHNKGLIHHWS GHNLNKFHPLPESPALNFRL |
| Secondary structure | LLHHHHHHHHHHHHLLLLEEEELLLHHHHHEELLLLLLEEEEHHHHLLLLLLLLLEEEEL LLLLLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
