Difference between revisions of "NONHSAT035017"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccacgccGGCTTAGTAAATCTTAATATAGCAACACCTCACTTGCCTGGAAGAGGGAACCGCAATCAATCAAAATGagggcctacagtaatgcctggcatgatgcaaacacttaaaaattatctgttgaatgaGACGTCTACAAATCCTAGGCCCTGGGGATACAATAATCTGGAAAACCAGACTTGCAGGATGCAGACGTTGATCATATGAACAGATATGCACAGAAGAGCTCATTTTGCAGCTCTCAAGCTTTTATAGCATGCTGTAAACAATTGTCAAAGTTGTTTATCAAGAAACAGATAGAGTTGCAACTTGTTTCTAGTAATAGAAACTTTTACACTGCATTCAATGCCTAACGTTGCAGAAACAGAAAGGTCAAATGATTCTGGAAATGGTGAGCACAA</dnaseq>| | sequence = <dnaseq>ccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccacgccGGCTTAGTAAATCTTAATATAGCAACACCTCACTTGCCTGGAAGAGGGAACCGCAATCAATCAAAATGagggcctacagtaatgcctggcatgatgcaaacacttaaaaattatctgttgaatgaGACGTCTACAAATCCTAGGCCCTGGGGATACAATAATCTGGAAAACCAGACTTGCAGGATGCAGACGTTGATCATATGAACAGATATGCACAGAAGAGCTCATTTTGCAGCTCTCAAGCTTTTATAGCATGCTGTAAACAATTGTCAAAGTTGTTTATCAAGAAACAGATAGAGTTGCAACTTGTTTCTAGTAATAGAAACTTTTACACTGCATTCAATGCCTAACGTTGCAGAAACAGAAAGGTCAAATGATTCTGGAAATGGTGAGCACAA</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG014109]][[Category:Transcripts]] |
Latest revision as of 21:29, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035017 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
452 nt |
| Genomic location |
chr13+:103453844..103459673 |
| Exon number |
2 |
| Exons |
103453844..103454117,103459496..103459673 |
| Genome context |
|
| Sequence |
000001 ccacccgcct cagcctccca aagtgctggg attacaggtg tgagccacca cgccGGCTTA GTAAATCTTA ATATAGCAAC 000080
000081 ACCTCACTTG CCTGGAAGAG GGAACCGCAA TCAATCAAAA TGagggccta cagtaatgcc tggcatgatg caaacactta 000160 000161 aaaattatct gttgaatgaG ACGTCTACAA ATCCTAGGCC CTGGGGATAC AATAATCTGG AAAACCAGAC TTGCAGGATG 000240 000241 CAGACGTTGA TCATATGAAC AGATATGCAC AGAAGAGCTC ATTTTGCAGC TCTCAAGCTT TTATAGCATG CTGTAAACAA 000320 000321 TTGTCAAAGT TGTTTATCAA GAAACAGATA GAGTTGCAAC TTGTTTCTAG TAATAGAAAC TTTTACACTG CATTCAATGC 000400 000401 CTAACGTTGC AGAAACAGAA AGGTCAAATG ATTCTGGAAA TGGTGAGCAC AA |
Predicted Small Protein
| Name | NONHSAT035017_smProtein_254:403 |
| Length | 50 |
| Molecular weight | 5657.5274 |
| Aromaticity | 0.142857142857 |
| Instability index | 63.9553061224 |
| Isoelectric point | 9.73358154297 |
| Runs | 7 |
| Runs residual | 0.019194704909 |
| Runs probability | 0.0293612940672 |
| Amino acid sequence | MNRYAQKSSFCSSQAFIACCKQLSKLFIKKQIELQLVSSNRNFYTAFNA |
| Secondary structure | LLHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLEELLLLL |
| PRMN | - |
| PiMo | - |
