Difference between revisions of "NONHSAT035888"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ctccctccttccttccctcccttcctccctctctccctccctcccAGCTCCTGCACCAGGAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGGCTCCACGCTGGCCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAGAGCTGCCATCCCGGCTGGGGGCCGGGCTAGAGCGACATCATGGTATTCCCCTTACTAAAAAAAGTGTGTATTAGGAGGAGAGAGAGGaaaaaaagaggaaagaaggaaaaaaaaaagaattaaaaaaaaaaaaaagaaaaaCAGAAGATGACCTTGATGGaaaaaaaatattttttaaaaaaaaGATATACTGTGGAAGGGGGGAGAATCCCATAACTAACTGCTGAGGAGGGACCTGCTTTGGGGAGTAGGGGAAGGCCCAGGGAGTGGGGCAGGGGGCTGCTTATTCACTCTGGGGATTCGCCATGGACACGTCTCAACTGCGCAAGCTGCTGCCCATGTTTCCCTGCCCCACTTCACCCCCTTGGGGGCTGCTCAAGGGTAGGTGGGCGTGGGTGGTAGGAGGTTTTTTTTTTTACCCAGGGCTCTGGAAGGACACCAAACTGTTCTGCTTGTTACCTTCCCTCCGTCTTCTCCTCGCCTTTCACAGTCCCCTCCTGCCTGCTCCTGTCCAGCCAGGTCTACCACCCACCCCACCCCTCTTCTCCGGCTCCCTGCCCCTCCAGATTGCCTGGTGATCTATTTTGTTTCCTTTTGTGTTTCTTTTTCTGTTTTGAGTGTCTTTCTTTGCAGGTTTCTGTAGCCGGAAGATCTCCGTTCCGCTCCCAGCGGCTCCAGTGTAAATTCCCCTTCCCCCTGGGGAAATGCACTACCTTGTTTTGGGGGGTTTAGGGGTGtttttgtttttcagttgttttgtttttttgttttttttttttttcctttgccttttttcccttttatttGGAGGGAATGGGAGGAAGTGGGAACAGGGAGGTGGGAGGTGGATTTTGTTTATTTTTTTAGCTCATTTCCAGGGGTGGGAATTTTTTTTTAATATGTGTCATGAATAAAGTTGTTTTTGAAAAT</dnaseq>| | sequence = <dnaseq>ctccctccttccttccctcccttcctccctctctccctccctcccAGCTCCTGCACCAGGAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGGCTCCACGCTGGCCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAGAGCTGCCATCCCGGCTGGGGGCCGGGCTAGAGCGACATCATGGTATTCCCCTTACTAAAAAAAGTGTGTATTAGGAGGAGAGAGAGGaaaaaaagaggaaagaaggaaaaaaaaaagaattaaaaaaaaaaaaaagaaaaaCAGAAGATGACCTTGATGGaaaaaaaatattttttaaaaaaaaGATATACTGTGGAAGGGGGGAGAATCCCATAACTAACTGCTGAGGAGGGACCTGCTTTGGGGAGTAGGGGAAGGCCCAGGGAGTGGGGCAGGGGGCTGCTTATTCACTCTGGGGATTCGCCATGGACACGTCTCAACTGCGCAAGCTGCTGCCCATGTTTCCCTGCCCCACTTCACCCCCTTGGGGGCTGCTCAAGGGTAGGTGGGCGTGGGTGGTAGGAGGTTTTTTTTTTTACCCAGGGCTCTGGAAGGACACCAAACTGTTCTGCTTGTTACCTTCCCTCCGTCTTCTCCTCGCCTTTCACAGTCCCCTCCTGCCTGCTCCTGTCCAGCCAGGTCTACCACCCACCCCACCCCTCTTCTCCGGCTCCCTGCCCCTCCAGATTGCCTGGTGATCTATTTTGTTTCCTTTTGTGTTTCTTTTTCTGTTTTGAGTGTCTTTCTTTGCAGGTTTCTGTAGCCGGAAGATCTCCGTTCCGCTCCCAGCGGCTCCAGTGTAAATTCCCCTTCCCCCTGGGGAAATGCACTACCTTGTTTTGGGGGGTTTAGGGGTGtttttgtttttcagttgttttgtttttttgttttttttttttttcctttgccttttttcccttttatttGGAGGGAATGGGAGGAAGTGGGAACAGGGAGGTGGGAGGTGGATTTTGTTTATTTTTTTAGCTCATTTCCAGGGGTGGGAATTTTTTTTTAATATGTGTCATGAATAAAGTTGTTTTTGAAAAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG014490]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:33, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035888 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
1092 nt |
| Genomic location |
chr14+:23776012..23795367 |
| Exon number |
3 |
| Exons |
23776012..23776103,23776401..23776488,23794456..23795367 |
| Genome context |
|
| Sequence |
000001 ctccctcctt ccttccctcc cttcctccct ctctccctcc ctcccAGCTC CTGCACCAGG AAACGGCCCG GATCCCGGCA 000080
000081 GCGGCCTGAC CCGGCTCCAC GCTGGCCAGG AGGATGAAAG GCCCCAGCTG GGGGCTCCTT GCCACCAGTG CTGTGTCTTA 000160 000161 AGAGCTGCCA TCCCGGCTGG GGGCCGGGCT AGAGCGACAT CATGGTATTC CCCTTACTAA AAAAAGTGTG TATTAGGAGG 000240 000241 AGAGAGAGGa aaaaaagagg aaagaaggaa aaaaaaaaga attaaaaaaa aaaaaaagaa aaaCAGAAGA TGACCTTGAT 000320 000321 GGaaaaaaaa tattttttaa aaaaaaGATA TACTGTGGAA GGGGGGAGAA TCCCATAACT AACTGCTGAG GAGGGACCTG 000400 000401 CTTTGGGGAG TAGGGGAAGG CCCAGGGAGT GGGGCAGGGG GCTGCTTATT CACTCTGGGG ATTCGCCATG GACACGTCTC 000480 000481 AACTGCGCAA GCTGCTGCCC ATGTTTCCCT GCCCCACTTC ACCCCCTTGG GGGCTGCTCA AGGGTAGGTG GGCGTGGGTG 000560 000561 GTAGGAGGTT TTTTTTTTTA CCCAGGGCTC TGGAAGGACA CCAAACTGTT CTGCTTGTTA CCTTCCCTCC GTCTTCTCCT 000640 000641 CGCCTTTCAC AGTCCCCTCC TGCCTGCTCC TGTCCAGCCA GGTCTACCAC CCACCCCACC CCTCTTCTCC GGCTCCCTGC 000720 000721 CCCTCCAGAT TGCCTGGTGA TCTATTTTGT TTCCTTTTGT GTTTCTTTTT CTGTTTTGAG TGTCTTTCTT TGCAGGTTTC 000800 000801 TGTAGCCGGA AGATCTCCGT TCCGCTCCCA GCGGCTCCAG TGTAAATTCC CCTTCCCCCT GGGGAAATGC ACTACCTTGT 000880 000881 TTTGGGGGGT TTAGGGGTGt ttttgttttt cagttgtttt gtttttttgt tttttttttt tttcctttgc cttttttccc 000960 000961 ttttatttGG AGGGAATGGG AGGAAGTGGG AACAGGGAGG TGGGAGGTGG ATTTTGTTTA TTTTTTTAGC TCATTTCCAG 001040 001041 GGGTGGGAAT TTTTTTTTAA TATGTGTCAT GAATAAAGTT GTTTTTGAAA AT |
Predicted Small Protein
| Name | NONHSAT035888_smProtein_467:739 |
| Length | 91 |
| Molecular weight | 10069.0187 |
| Aromaticity | 0.144444444444 |
| Instability index | 65.4778888889 |
| Isoelectric point | 9.89642333984 |
| Runs | 13 |
| Runs residual | 0.00458553791887 |
| Runs probability | 0.0397388338565 |
| Amino acid sequence | MDTSQLRKLLPMFPCPTSPPWGLLKGRWAWVVGGFFFYPGLWKDTKLFCLLPSLRLLLAF HSPLLPAPVQPGLPPTPPLFSGSLPLQIAW |
| Secondary structure | LLHHHHHHHLLLLLLLLLLLHHHLLLLEEEEELLEEELLLLLLLLLLLLLLHHHHHHHHH HLLLLLLLLLLLLLLLLLLLLLLLLLLEEL |
| PRMN | - |
| PiMo | - |
