Difference between revisions of "NONHSAT062792"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTTCCCACTGGTGATGCCTGTCTGACACGTTTTGGTATTTAGTAGGAAATGAAGTGTTTCGAAGCTTCGAGAGAAGCTTCAAAATTGTCACAATTGCTGAAAACAGAATGAATCGTGAACATTATCTCAATATTTTGTATAATAGACAAGACCACAGTGTTTTGGTTCCCTGACCTGTTTTTGTGTTTATGTTAGGATCTGAATCATGTTCTGGGTAAGGGGACGAGGAGCGAACACTGCACTAAGATTTGGTTTGCCAAATCAGATTCTTTGGTCAAGAGTCAgcatgagccaccgtgcccagccTGATTGACAATGGCCTCTTGAAGGCTGGGTTTTCCCAGCCGGACAGTGCCCGCCCCACATGCTCCACTCCCACGCTTTCATCTGCAGGCCTGCCTTCCTCTCAGCCACCTCACTGCTGAGCTCTGTGGTAGAGAATTTCCTTTACCCATCAGGGTATGGTCTGGCTGGTAATACTGACTCCAACCCAGCTCCTTCATTTTATAGAAGGAGGCATTTCTGAATCATGTTTGTTCACCATGGCGAGACTCACTGCAGAATTTTTAACCACCTTATTTTAAGTCATTCATTCTAGGAACAGTCAAGCCCCTACCACAAAGGGGCCAGATCCGTTCAAGTGAGGAAGCACTTGCAGTTTCTGAATTTTGCTGTATATTTGTCCTATGTCACCCAACAGGCCCTTTGCTATAGCTGGGACATTACCAGACCCCAATACCTTAGGGTCTCACAGCCTGAAGGACACAGAGCATTGAATTATTAAAAGACCTGAAAATATTATAATGTTTTTCAATTGTCACCTGTTTTCAAGACTTAAATGCTATAGACTTTTCTGCAGGAATGACGTGTATATTCCTCACTGGCATTTACCAAAAATAAATGATGGTTTCCAGGGAATCAAAA</dnaseq>| | sequence = <dnaseq>GTTCCCACTGGTGATGCCTGTCTGACACGTTTTGGTATTTAGTAGGAAATGAAGTGTTTCGAAGCTTCGAGAGAAGCTTCAAAATTGTCACAATTGCTGAAAACAGAATGAATCGTGAACATTATCTCAATATTTTGTATAATAGACAAGACCACAGTGTTTTGGTTCCCTGACCTGTTTTTGTGTTTATGTTAGGATCTGAATCATGTTCTGGGTAAGGGGACGAGGAGCGAACACTGCACTAAGATTTGGTTTGCCAAATCAGATTCTTTGGTCAAGAGTCAgcatgagccaccgtgcccagccTGATTGACAATGGCCTCTTGAAGGCTGGGTTTTCCCAGCCGGACAGTGCCCGCCCCACATGCTCCACTCCCACGCTTTCATCTGCAGGCCTGCCTTCCTCTCAGCCACCTCACTGCTGAGCTCTGTGGTAGAGAATTTCCTTTACCCATCAGGGTATGGTCTGGCTGGTAATACTGACTCCAACCCAGCTCCTTCATTTTATAGAAGGAGGCATTTCTGAATCATGTTTGTTCACCATGGCGAGACTCACTGCAGAATTTTTAACCACCTTATTTTAAGTCATTCATTCTAGGAACAGTCAAGCCCCTACCACAAAGGGGCCAGATCCGTTCAAGTGAGGAAGCACTTGCAGTTTCTGAATTTTGCTGTATATTTGTCCTATGTCACCCAACAGGCCCTTTGCTATAGCTGGGACATTACCAGACCCCAATACCTTAGGGTCTCACAGCCTGAAGGACACAGAGCATTGAATTATTAAAAGACCTGAAAATATTATAATGTTTTTCAATTGTCACCTGTTTTCAAGACTTAAATGCTATAGACTTTTCTGCAGGAATGACGTGTATATTCCTCACTGGCATTTACCAAAAATAAATGATGGTTTCCAGGGAATCAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG025044]][[Category:Transcripts]] |
Latest revision as of 22:48, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT062792 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
924 nt |
| Genomic location |
chr19-:16660642..16663144 |
| Exon number |
2 |
| Exons |
16660642..16661281,16662861..16663144 |
| Genome context |
|
| Sequence |
000001 GTTCCCACTG GTGATGCCTG TCTGACACGT TTTGGTATTT AGTAGGAAAT GAAGTGTTTC GAAGCTTCGA GAGAAGCTTC 000080
000081 AAAATTGTCA CAATTGCTGA AAACAGAATG AATCGTGAAC ATTATCTCAA TATTTTGTAT AATAGACAAG ACCACAGTGT 000160 000161 TTTGGTTCCC TGACCTGTTT TTGTGTTTAT GTTAGGATCT GAATCATGTT CTGGGTAAGG GGACGAGGAG CGAACACTGC 000240 000241 ACTAAGATTT GGTTTGCCAA ATCAGATTCT TTGGTCAAGA GTCAgcatga gccaccgtgc ccagccTGAT TGACAATGGC 000320 000321 CTCTTGAAGG CTGGGTTTTC CCAGCCGGAC AGTGCCCGCC CCACATGCTC CACTCCCACG CTTTCATCTG CAGGCCTGCC 000400 000401 TTCCTCTCAG CCACCTCACT GCTGAGCTCT GTGGTAGAGA ATTTCCTTTA CCCATCAGGG TATGGTCTGG CTGGTAATAC 000480 000481 TGACTCCAAC CCAGCTCCTT CATTTTATAG AAGGAGGCAT TTCTGAATCA TGTTTGTTCA CCATGGCGAG ACTCACTGCA 000560 000561 GAATTTTTAA CCACCTTATT TTAAGTCATT CATTCTAGGA ACAGTCAAGC CCCTACCACA AAGGGGCCAG ATCCGTTCAA 000640 000641 GTGAGGAAGC ACTTGCAGTT TCTGAATTTT GCTGTATATT TGTCCTATGT CACCCAACAG GCCCTTTGCT ATAGCTGGGA 000720 000721 CATTACCAGA CCCCAATACC TTAGGGTCTC ACAGCCTGAA GGACACAGAG CATTGAATTA TTAAAAGACC TGAAAATATT 000800 000801 ATAATGTTTT TCAATTGTCA CCTGTTTTCA AGACTTAAAT GCTATAGACT TTTCTGCAGG AATGACGTGT ATATTCCTCA 000880 000881 CTGGCATTTA CCAAAAATAA ATGATGGTTT CCAGGGAATC AAAA |
Predicted Small Protein
| Name | NONHSAT062792_smProtein_461:583 |
| Length | 41 |
| Molecular weight | 4544.3987 |
| Aromaticity | 0.125 |
| Instability index | 50.8 |
| Isoelectric point | 4.74981689453 |
| Runs | 7 |
| Runs residual | 0.00302419354839 |
| Runs probability | 0.0203018144195 |
| Amino acid sequence | MVWLVILTPTQLLHFIEGGISESCLFTMARLTAEFLTTLF |
| Secondary structure | LEEEEEELLHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL |
| PRMN | - |
| PiMo | - |
