Difference between revisions of "NONHSAT064232"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>agttattctcttaagggggataagtgggggctgcaagtgaagaaactaaaatggagtctgtccggctctctctgctaggagagagtcactcaggttaaaacaaggtagggtatcacaGGCTCTAGCTATCCAGGCAGATCCTTTAGAAAAGAGAACATCCAACCTCTTGGGCTGCCCCTTGGGCCTTTATGCTCTGCTTGGTGGATCTGCAAGTCACGTGGGTGCTGGCTTCCGTCTGCAGGGAAGTCCCACTTGCGCAGAGCCATGGCTCATCACGAGGAGTCGGTGCGGGAGGCCAGCCTCTGCAAGAAGCTGCGGAGCATTGAGGTGCTACAGAAGGTGCTGTGTGCCGCACAGGAACGCTCCCGGCTCACGTACGCCCAGCACCAGGAGGAGGATGACCTGCTGAACCTGATCGACGCCCCCAGTGTTGTTGCTAAAACTGAGCAAGAGGTTGACATTATATTG</dnaseq>| | sequence = <dnaseq>agttattctcttaagggggataagtgggggctgcaagtgaagaaactaaaatggagtctgtccggctctctctgctaggagagagtcactcaggttaaaacaaggtagggtatcacaGGCTCTAGCTATCCAGGCAGATCCTTTAGAAAAGAGAACATCCAACCTCTTGGGCTGCCCCTTGGGCCTTTATGCTCTGCTTGGTGGATCTGCAAGTCACGTGGGTGCTGGCTTCCGTCTGCAGGGAAGTCCCACTTGCGCAGAGCCATGGCTCATCACGAGGAGTCGGTGCGGGAGGCCAGCCTCTGCAAGAAGCTGCGGAGCATTGAGGTGCTACAGAAGGTGCTGTGTGCCGCACAGGAACGCTCCCGGCTCACGTACGCCCAGCACCAGGAGGAGGATGACCTGCTGAACCTGATCGACGCCCCCAGTGTTGTTGCTAAAACTGAGCAAGAGGTTGACATTATATTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG025477]][[Category:Transcripts]] |
Latest revision as of 22:52, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT064232 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
468 nt |
| Genomic location |
chr19-:33484928..33487367 |
| Exon number |
2 |
| Exons |
33484928..33484959,33486932..33487367 |
| Genome context |
|
| Sequence |
000001 agttattctc ttaaggggga taagtggggg ctgcaagtga agaaactaaa atggagtctg tccggctctc tctgctagga 000080
000081 gagagtcact caggttaaaa caaggtaggg tatcacaGGC TCTAGCTATC CAGGCAGATC CTTTAGAAAA GAGAACATCC 000160 000161 AACCTCTTGG GCTGCCCCTT GGGCCTTTAT GCTCTGCTTG GTGGATCTGC AAGTCACGTG GGTGCTGGCT TCCGTCTGCA 000240 000241 GGGAAGTCCC ACTTGCGCAG AGCCATGGCT CATCACGAGG AGTCGGTGCG GGAGGCCAGC CTCTGCAAGA AGCTGCGGAG 000320 000321 CATTGAGGTG CTACAGAAGG TGCTGTGTGC CGCACAGGAA CGCTCCCGGC TCACGTACGC CCAGCACCAG GAGGAGGATG 000400 000401 ACCTGCTGAA CCTGATCGAC GCCCCCAGTG TTGTTGCTAA AACTGAGCAA GAGGTTGACA TTATATTG |
Predicted Small Protein
| Name | NONHSAT064232_smProtein_188:325 |
| Length | 46 |
| Molecular weight | 4701.3243 |
| Aromaticity | 0.0222222222222 |
| Instability index | 40.6844444444 |
| Isoelectric point | 5.34783935547 |
| Runs | 8 |
| Runs residual | 0.0155303030303 |
| Runs probability | 0.028296679032 |
| Amino acid sequence | MLCLVDLQVTWVLASVCREVPLAQSHGSSRGVGAGGQPLQEAAEH |
| Secondary structure | LEEEEELEEEEEEHHHLLLLLLLLLLLLLLLLLLLLLHHHHHHLL |
| PRMN | - |
| PiMo | - |
