Difference between revisions of "NONHSAT067593"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ATCAAAATTTGGTTCAAGTAGCCTATTCTATTTTCTTTCCTTATGTCATCTGATAAAATGGTGAGCTGTGAGCTTCTAAGTAAATGTCTCCCTCAAGTTCCTCTGGTTCATAATATTCCTTGCAGATGTTGAACGATGGGCTGGATTGTTTTGGAACCTTGTTCCAGCAGAGCCCATGTGTTCATGAAGAAAACATTTGCTTACAGCTTATGACTACCATTGCCTCTCTTTCAGTGTtttttgttgttgttgttgttttggtttttgttttgttttgttttgtttgagaaggagtctcactctgtcacccaggcggaggttgcagtgagctgagatcctgcaactgcactctggctgggcaagagcgagactccatctctaaaataaaattaaagtaatataaaaaaCTGCTTCTCATGAAAGCTTTGGTATAATCTTACGAGGTAACATCATTGTTTTGCAACTACGGTATGTGTTCAAAATGTTCTTCTTTGACCCCACATTTCATTAGATATATTTTTAAGCCATTTTAAAATTGTTTTTCTCTGAAATTTATTGTGTTTAGTTTACATTGAGGACTGCATGCTTTCTAGTCTGTATCATACATTGGAAACATTTTCTAGTACCTGATAAATGATTTTAGGTTGTTTCGATGTGTACTTGATAAAGATATCAAGGAACTTTTTCTTTATGCTAACATTAAAATTTAGTTGAAGTAGC</dnaseq>| | sequence = <dnaseq>ATCAAAATTTGGTTCAAGTAGCCTATTCTATTTTCTTTCCTTATGTCATCTGATAAAATGGTGAGCTGTGAGCTTCTAAGTAAATGTCTCCCTCAAGTTCCTCTGGTTCATAATATTCCTTGCAGATGTTGAACGATGGGCTGGATTGTTTTGGAACCTTGTTCCAGCAGAGCCCATGTGTTCATGAAGAAAACATTTGCTTACAGCTTATGACTACCATTGCCTCTCTTTCAGTGTtttttgttgttgttgttgttttggtttttgttttgttttgttttgtttgagaaggagtctcactctgtcacccaggcggaggttgcagtgagctgagatcctgcaactgcactctggctgggcaagagcgagactccatctctaaaataaaattaaagtaatataaaaaaCTGCTTCTCATGAAAGCTTTGGTATAATCTTACGAGGTAACATCATTGTTTTGCAACTACGGTATGTGTTCAAAATGTTCTTCTTTGACCCCACATTTCATTAGATATATTTTTAAGCCATTTTAAAATTGTTTTTCTCTGAAATTTATTGTGTTTAGTTTACATTGAGGACTGCATGCTTTCTAGTCTGTATCATACATTGGAAACATTTTCTAGTACCTGATAAATGATTTTAGGTTGTTTCGATGTGTACTTGATAAAGATATCAAGGAACTTTTTCTTTATGCTAACATTAAAATTTAGTTGAAGTAGC</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG026429]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:03, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT067593 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
720 nt |
| Genomic location |
chr19-:53379431..53398409 |
| Exon number |
2 |
| Exons |
53379431..53379838,53398098..53398409 |
| Genome context |
|
| Sequence |
000001 ATCAAAATTT GGTTCAAGTA GCCTATTCTA TTTTCTTTCC TTATGTCATC TGATAAAATG GTGAGCTGTG AGCTTCTAAG 000080
000081 TAAATGTCTC CCTCAAGTTC CTCTGGTTCA TAATATTCCT TGCAGATGTT GAACGATGGG CTGGATTGTT TTGGAACCTT 000160 000161 GTTCCAGCAG AGCCCATGTG TTCATGAAGA AAACATTTGC TTACAGCTTA TGACTACCAT TGCCTCTCTT TCAGTGTttt 000240 000241 ttgttgttgt tgttgttttg gtttttgttt tgttttgttt tgtttgagaa ggagtctcac tctgtcaccc aggcggaggt 000320 000321 tgcagtgagc tgagatcctg caactgcact ctggctgggc aagagcgaga ctccatctct aaaataaaat taaagtaata 000400 000401 taaaaaaCTG CTTCTCATGA AAGCTTTGGT ATAATCTTAC GAGGTAACAT CATTGTTTTG CAACTACGGT ATGTGTTCAA 000480 000481 AATGTTCTTC TTTGACCCCA CATTTCATTA GATATATTTT TAAGCCATTT TAAAATTGTT TTTCTCTGAA ATTTATTGTG 000560 000561 TTTAGTTTAC ATTGAGGACT GCATGCTTTC TAGTCTGTAT CATACATTGG AAACATTTTC TAGTACCTGA TAAATGATTT 000640 000641 TAGGTTGTTT CGATGTGTAC TTGATAAAGA TATCAAGGAA CTTTTTCTTT ATGCTAACAT TAAAATTTAG TTGAAGTAGC 000720 |
Predicted Small Protein
| Name | NONHSAT067593_smProtein_125:286 |
| Length | 54 |
| Molecular weight | 5931.0557 |
| Aromaticity | 0.132075471698 |
| Instability index | 49.2622641509 |
| Isoelectric point | 3.91278076172 |
| Runs | 7 |
| Runs residual | 0.0281868384722 |
| Runs probability | 0.0488429606078 |
| Amino acid sequence | MLNDGLDCFGTLFQQSPCVHEENICLQLMTTIASLSVFFVVVVVLVFVLFCFV |
| Secondary structure | LLLLLHHHHLLLLLLLLLLLHHHHHHHHHHHHHLLEEEEEEEEEEEEEEEEEL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLL |
| PiMo | ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiii |
