Difference between revisions of "NONHSAT068183"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGTCAGTGCGGCGCCAGCTCTGCAGAGCCCAGACAGGGTCCGGTTGGGGAGGtgctgggattacagatgtgagccaccgtgcccagcccagagttcttttatcctctagaaaattcttcattccatagagctttttcatattattagcttaattatgcataatgttttataattaaaaatttctctttattttgttctatcccctgtttcctgtaaactgctgtttgtggtttactcgttattagatttgtcaaaggtttatctagcttactattgtttttccaaagaaccaacattaggattcatttatatccattatttcttttatttgtaatttgtttttctttgatatgtattgcatttattttttattgtttttcttctttgtctcagtttttatactgaatacttgatttatattctctttatattttctATAATAGCATACTTATTAACGCAAATGTACTTCTGGATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTGTCTAAAAATTACATTGTAGTGTGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGATTTGGTTTATTTTTTGTTTAAAAATAGTTttgttttcttgttttactgcactgtgaacacagaatgtggcctataacacatctgcttccaaaactttttaaaaagcttttagtgtggcctagaacatgtccattttttgtaattgtttcacgaacatttaagatgaagatatcttctctgtctgtagaactgaaaactttatgtgcctgttagttaactcagtatcgtcaattatattgttcagattcatgtgttatctaattttggcctattatattcattaaaaaccaataaggttatgtgaaactttgttagtacaattgtttttgctaataaatttttataatctttgctttatgtactcaacagctgtgtaattcgaggcatataagtgcagcattgttatgtccttgttaattaaataatatatgtaaaacaccatatgacaatggctggcagatagtaggcactcaataaatgttaattaAAACCTG</dnaseq>| | sequence = <dnaseq>AGTCAGTGCGGCGCCAGCTCTGCAGAGCCCAGACAGGGTCCGGTTGGGGAGGtgctgggattacagatgtgagccaccgtgcccagcccagagttcttttatcctctagaaaattcttcattccatagagctttttcatattattagcttaattatgcataatgttttataattaaaaatttctctttattttgttctatcccctgtttcctgtaaactgctgtttgtggtttactcgttattagatttgtcaaaggtttatctagcttactattgtttttccaaagaaccaacattaggattcatttatatccattatttcttttatttgtaatttgtttttctttgatatgtattgcatttattttttattgtttttcttctttgtctcagtttttatactgaatacttgatttatattctctttatattttctATAATAGCATACTTATTAACGCAAATGTACTTCTGGATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTGTCTAAAAATTACATTGTAGTGTGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGATTTGGTTTATTTTTTGTTTAAAAATAGTTttgttttcttgttttactgcactgtgaacacagaatgtggcctataacacatctgcttccaaaactttttaaaaagcttttagtgtggcctagaacatgtccattttttgtaattgtttcacgaacatttaagatgaagatatcttctctgtctgtagaactgaaaactttatgtgcctgttagttaactcagtatcgtcaattatattgttcagattcatgtgttatctaattttggcctattatattcattaaaaaccaataaggttatgtgaaactttgttagtacaattgtttttgctaataaatttttataatctttgctttatgtactcaacagctgtgtaattcgaggcatataagtgcagcattgttatgtccttgttaattaaataatatatgtaaaacaccatatgacaatggctggcagatagtaggcactcaataaatgttaattaAAACCTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG026642]][[Category:Transcripts]] |
Latest revision as of 23:07, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT068183 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
1091 nt |
| Genomic location |
chr19+:57154527..57168614 |
| Exon number |
2 |
| Exons |
57154527..57154578,57167576..57168614 |
| Genome context |
|
| Sequence |
000001 AGTCAGTGCG GCGCCAGCTC TGCAGAGCCC AGACAGGGTC CGGTTGGGGA GGtgctggga ttacagatgt gagccaccgt 000080
000081 gcccagccca gagttctttt atcctctaga aaattcttca ttccatagag ctttttcata ttattagctt aattatgcat 000160 000161 aatgttttat aattaaaaat ttctctttat tttgttctat cccctgtttc ctgtaaactg ctgtttgtgg tttactcgtt 000240 000241 attagatttg tcaaaggttt atctagctta ctattgtttt tccaaagaac caacattagg attcatttat atccattatt 000320 000321 tcttttattt gtaatttgtt tttctttgat atgtattgca tttatttttt attgtttttc ttctttgtct cagtttttat 000400 000401 actgaatact tgatttatat tctctttata ttttctATAA TAGCATACTT ATTAACGCAA ATGTACTTCT GGATATAGCG 000480 000481 TTGGCCACAT CTTAACATTT GATTATTCAT TTTTGTTTAT GTTGTCTAAA AATTACATTG TAGTGTGTCT AAATATTACA 000560 000561 TTGTAGTGTT TCTAAAGAGT GCTTTGAAAC TCAGTGATTT GGTTTATTTT TTGTTTAAAA ATAGTTttgt tttcttgttt 000640 000641 tactgcactg tgaacacaga atgtggccta taacacatct gcttccaaaa ctttttaaaa agcttttagt gtggcctaga 000720 000721 acatgtccat tttttgtaat tgtttcacga acatttaaga tgaagatatc ttctctgtct gtagaactga aaactttatg 000800 000801 tgcctgttag ttaactcagt atcgtcaatt atattgttca gattcatgtg ttatctaatt ttggcctatt atattcatta 000880 000881 aaaaccaata aggttatgtg aaactttgtt agtacaattg tttttgctaa taaattttta taatctttgc tttatgtact 000960 000961 caacagctgt gtaattcgag gcatataagt gcagcattgt tatgtccttg ttaattaaat aatatatgta aaacaccata 001040 001041 tgacaatggc tggcagatag taggcactca ataaatgtta attaAAACCT G |
Predicted Small Protein
| Name | NONHSAT068183_smProtein_797:880 |
| Length | 28 |
| Molecular weight | 3226.9781 |
| Aromaticity | 0.185185185185 |
| Instability index | 47.3037037037 |
| Isoelectric point | 7.82342529297 |
| Runs | 5 |
| Runs residual | 0.0214707461084 |
| Runs probability | 0.00429252782193 |
| Amino acid sequence | MCLLVNSVSSIILFRFMCYLILAYYIH |
| Secondary structure | LEEEELLHHHHHHHHHHHHHHHHHHHL |
| PRMN | LLHHHHHHHHHHHHHHHHHHHHHHLLL |
| PiMo | i?????????????????????????? |
