Difference between revisions of "NONHSAT071754"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGTAGTCAATGTTATCTATGAGTTAGGGTTCGGAAGAGAGCTCAAGGGTGGGGATAAAGAGTAACTGGGACATAGACTGTTGGGCATGGTGTCTCTGGATGCTTGGTTGAAACGTTTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCGTTATGATTGATCCCGTTACCCATGTGGTGAGCATAGTAGTCAAAAGTTAGTTTTTCTTTTTTTCTTTTTTCTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATTGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGCAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGG</dnaseq>| | sequence = <dnaseq>AGTAGTCAATGTTATCTATGAGTTAGGGTTCGGAAGAGAGCTCAAGGGTGGGGATAAAGAGTAACTGGGACATAGACTGTTGGGCATGGTGTCTCTGGATGCTTGGTTGAAACGTTTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCGTTATGATTGATCCCGTTACCCATGTGGTGAGCATAGTAGTCAAAAGTTAGTTTTTCTTTTTTTCTTTTTTCTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATTGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGCAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGG</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 23:23, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT071754 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
441 nt |
| Genomic location |
chr2+:75012063..75019053 |
| Exon number |
4 |
| Exons |
75012063..75012171,75012834..75012924,75013296..75013425,75018943..75019053 |
| Genome context |
|
| Sequence |
000001 AGTAGTCAAT GTTATCTATG AGTTAGGGTT CGGAAGAGAG CTCAAGGGTG GGGATAAAGA GTAACTGGGA CATAGACTGT 000080
000081 TGGGCATGGT GTCTCTGGAT GCTTGGTTGA AACGTTTTTT GTTTTTGTTT TGTTTTGTTT TTTTTTGAGA CGGAGTCTCG 000160 000161 CTCTGTCGCC CAGGCTGGAG TGCAGTGGCG CGATCTCAGC GTTATGATTG ATCCCGTTAC CCATGTGGTG AGCATAGTAG 000240 000241 TCAAAAGTTA GTTTTTCTTT TTTTCTTTTT TCTTTTTTTT TGAGATGGAG TCTTGCTCTG TCGCCCAGGC TGGAGTGCAG 000320 000321 TGGCACGATT GCGGGCGCCT GTAGTCCCAG CTACTCGGGA GGCTGAGGCA GGAGAATGGC GTGAACCCGG AAGGCGCAGC 000400 000401 TTGCAGTGAG CCGAGATCGT GCCACTGCAC TCCAGCCTGG G |
Predicted Small Protein
| Name | NONHSAT071754_smProtein_284:343 |
| Length | 20 |
| Molecular weight | 2077.3244 |
| Aromaticity | 0.0526315789474 |
| Instability index | 49.2315789474 |
| Isoelectric point | 5.30218505859 |
| Runs | 5 |
| Runs residual | 0.0123839009288 |
| Runs probability | 0.0341812400637 |
| Amino acid sequence | MESCSVAQAGVQWHDCGRL |
| Secondary structure | LLLHHHHHLLEEELLLLLL |
| PRMN | - |
| PiMo | - |
