Difference between revisions of "NONHSAT072731"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GTGCGCACCGGGCCTGGGGGCGAGCGGGACGGAAGCAAAGCTGGGGCGCCGGGGAGGTGGAAGACGAGCCCCACTCCGGTTACCACCAAAGAATATGATTTTGGTCTAGGGGCTCCAGTTTCTGAAGCTGAAAACTACCAGAATACTCTCCAGCTAGAACAAGAAGTGAGAAACCAAGATAGATTCATCTCGACACTGAAATTACAGGCATTTGGATACCTTTGTGATAGAAAAGGCCCTTTTCTTCATCCATTGATGGTTTGATAGTGGGCTGGGAAGGAAAGCTGTGTTCCTCCACATTAGGCAGCAAATACTTGATTGATTTGATATTTAGCTTAGTCAAATTGAAGATCTCAAACAGACAAATCATGGCTTGGAAGAATATGTTAGGAAACTCTTGGATAGTAAGGAGGTGGTAAGCAGTCAAGTAGATGATTTAACCAGCCACAATGAGCATCTTTGTAAAGAATTGATTAAAATTGACCAACTAGCAGAGCAACTCGAAAAAGAGAAAAATTTTGTGGTGGATTCCGCCAACAAGGAACTTGAAGAAGCCAAG</dnaseq>| | sequence = <dnaseq>GTGCGCACCGGGCCTGGGGGCGAGCGGGACGGAAGCAAAGCTGGGGCGCCGGGGAGGTGGAAGACGAGCCCCACTCCGGTTACCACCAAAGAATATGATTTTGGTCTAGGGGCTCCAGTTTCTGAAGCTGAAAACTACCAGAATACTCTCCAGCTAGAACAAGAAGTGAGAAACCAAGATAGATTCATCTCGACACTGAAATTACAGGCATTTGGATACCTTTGTGATAGAAAAGGCCCTTTTCTTCATCCATTGATGGTTTGATAGTGGGCTGGGAAGGAAAGCTGTGTTCCTCCACATTAGGCAGCAAATACTTGATTGATTTGATATTTAGCTTAGTCAAATTGAAGATCTCAAACAGACAAATCATGGCTTGGAAGAATATGTTAGGAAACTCTTGGATAGTAAGGAGGTGGTAAGCAGTCAAGTAGATGATTTAACCAGCCACAATGAGCATCTTTGTAAAGAATTGATTAAAATTGACCAACTAGCAGAGCAACTCGAAAAAGAGAAAAATTTTGTGGTGGATTCCGCCAACAAGGAACTTGAAGAAGCCAAG</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG028687]][[Category:Transcripts]] |
Latest revision as of 23:28, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT072731 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
559 nt |
| Genomic location |
chr2-:99734007..99757884 |
| Exon number |
4 |
| Exons |
99734007..99734222,99735014..99735149,99743511..99743639,99757807..99757884 |
| Genome context |
|
| Sequence |
000001 GTGCGCACCG GGCCTGGGGG CGAGCGGGAC GGAAGCAAAG CTGGGGCGCC GGGGAGGTGG AAGACGAGCC CCACTCCGGT 000080
000081 TACCACCAAA GAATATGATT TTGGTCTAGG GGCTCCAGTT TCTGAAGCTG AAAACTACCA GAATACTCTC CAGCTAGAAC 000160 000161 AAGAAGTGAG AAACCAAGAT AGATTCATCT CGACACTGAA ATTACAGGCA TTTGGATACC TTTGTGATAG AAAAGGCCCT 000240 000241 TTTCTTCATC CATTGATGGT TTGATAGTGG GCTGGGAAGG AAAGCTGTGT TCCTCCACAT TAGGCAGCAA ATACTTGATT 000320 000321 GATTTGATAT TTAGCTTAGT CAAATTGAAG ATCTCAAACA GACAAATCAT GGCTTGGAAG AATATGTTAG GAAACTCTTG 000400 000401 GATAGTAAGG AGGTGGTAAG CAGTCAAGTA GATGATTTAA CCAGCCACAA TGAGCATCTT TGTAAAGAAT TGATTAAAAT 000480 000481 TGACCAACTA GCAGAGCAAC TCGAAAAAGA GAAAAATTTT GTGGTGGATT CCGCCAACAA GGAACTTGAA GAAGCCAAG |
Predicted Small Protein
| Name | NONHSAT072731_smProtein_368:418 |
| Length | 17 |
| Molecular weight | 2048.4386 |
| Aromaticity | 0.1875 |
| Instability index | 78.075 |
| Isoelectric point | 12.0084838867 |
| Runs | 5 |
| Runs residual | 0.0104166666667 |
| Runs probability | 0.0144497438615 |
| Amino acid sequence | MAWKNMLGNSWIVRRW |
| Secondary structure | LHHHHLLLLLLEELLL |
| PRMN | - |
| PiMo | - |
