Difference between revisions of "NONHSAT074847"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TGTCACTGCTCTCCAGCCTGGGCAACAGAGTGGGACTATGTTAAAGACTTCTCTTAACCAATACTGTTAAGAAAATAAAGCAGATCACACACTGAGAGGAAATATTTGCAATACACATAACTGAAGAAGGACTTATATTTAGACTACATAAGCAACTTTATAAGTCTGTGGCCTACTGGAGGGTGAAGACACTCACTGGGTGCCATGGCACAGAGCTGTTCCACAGCCAGTAGATAATCAAGCAATACTGTTATGAGAACCGGTACATGCATTACTTTCTAAAGCTGACATGTTTCTCCGGGCCCTTCTGCTTTTTAAACAATGTTCCCAAAATTCTTGTAGAATTTCTCCACTCGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTGGGGAAAGGACTCCCTATTTAATAAATGGTGTTGGGAAAACTGGCTAGCCATATGCGGAAAACAGAAACTTGACCCCTTCCTTACACCGTATACAAAAATTAACTCAAGATGGATTAAAGACTTAA</dnaseq>| | sequence = <dnaseq>TGTCACTGCTCTCCAGCCTGGGCAACAGAGTGGGACTATGTTAAAGACTTCTCTTAACCAATACTGTTAAGAAAATAAAGCAGATCACACACTGAGAGGAAATATTTGCAATACACATAACTGAAGAAGGACTTATATTTAGACTACATAAGCAACTTTATAAGTCTGTGGCCTACTGGAGGGTGAAGACACTCACTGGGTGCCATGGCACAGAGCTGTTCCACAGCCAGTAGATAATCAAGCAATACTGTTATGAGAACCGGTACATGCATTACTTTCTAAAGCTGACATGTTTCTCCGGGCCCTTCTGCTTTTTAAACAATGTTCCCAAAATTCTTGTAGAATTTCTCCACTCGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTGGGGAAAGGACTCCCTATTTAATAAATGGTGTTGGGAAAACTGGCTAGCCATATGCGGAAAACAGAAACTTGACCCCTTCCTTACACCGTATACAAAAATTAACTCAAGATGGATTAAAGACTTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 23:36, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT074847 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
532 nt |
| Genomic location |
chr2+:147353947..147375970 |
| Exon number |
7 |
| Exons |
147353947..147353987,147354820..147354937,147357242..147357315,147362125..147362211,147372222..147372256,147375653..147375702,147375844..147375970 |
| Genome context |
|
| Sequence |
000001 TGTCACTGCT CTCCAGCCTG GGCAACAGAG TGGGACTATG TTAAAGACTT CTCTTAACCA ATACTGTTAA GAAAATAAAG 000080
000081 CAGATCACAC ACTGAGAGGA AATATTTGCA ATACACATAA CTGAAGAAGG ACTTATATTT AGACTACATA AGCAACTTTA 000160 000161 TAAGTCTGTG GCCTACTGGA GGGTGAAGAC ACTCACTGGG TGCCATGGCA CAGAGCTGTT CCACAGCCAG TAGATAATCA 000240 000241 AGCAATACTG TTATGAGAAC CGGTACATGC ATTACTTTCT AAAGCTGACA TGTTTCTCCG GGCCCTTCTG CTTTTTAAAC 000320 000321 AATGTTCCCA AAATTCTTGT AGAATTTCTC CACTCGCAAA AAGAACAAAG CTGGAGGCAT CACGCTACCT GACTTCAAAC 000400 000401 TATACTGGGG AAAGGACTCC CTATTTAATA AATGGTGTTG GGAAAACTGG CTAGCCATAT GCGGAAAACA GAAACTTGAC 000480 000481 CCCTTCCTTA CACCGTATAC AAAAATTAAC TCAAGATGGA TTAAAGACTT AA |
Predicted Small Protein
| Name | NONHSAT074847_smProtein_266:391 |
| Length | 42 |
| Molecular weight | 4935.7075 |
| Aromaticity | 0.170731707317 |
| Instability index | 67.1341463415 |
| Isoelectric point | 8.80596923828 |
| Runs | 7 |
| Runs residual | 0.00523716893611 |
| Runs probability | 0.0446034269564 |
| Amino acid sequence | MHYFLKLTCFSGPFCFLNNVPKILVEFLHSQKEQSWRHHAT |
| Secondary structure | LEEEEEEELLLLLEEELLLLHHHHHHHHHHHHHHHHHHLLL |
| PRMN | - |
| PiMo | - |
