Difference between revisions of "NONHSAT075372"

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sequence = <dnaseq>ATGGCCCAGCAGTCGGACAAGGCCGTGAAGTGCTGCGCCCTGGAGGAGATTCAAAGCACAATCATAGCAAAAGCACCTGGGTGTACGATTTGACCAAATTCCTGGCAGAGCATCCTGGTGGGAAAGAAGTCTTAAGGGAATAAGCTGGAGAGATGCTACTGAAAACTTTGAGGATGTCGGGCACTCTACAGATGCCAGAGAATTCTCCAAATCATAAATCATTGGGGTTTCATCTGGATGACAGATAAAGTTAACTAAGCCTTCAGAAttttttttttttttttgagacggagtctcactctgttgcccaggcgggagtgcaatggcacgatctcagctcaccgcgacctccgcctcccaggttcaagcgattcccctgcctcagcctctcgagtagctgggattacaggtgcgcaccaccatgcctggctaatttttgtattttttagtagagactgggtttcaccatgttggtcaggctggtctcgaactcctgacctcgtgatccgcccaccttggcctcccaaagtgctaggattacaagcgtgagctactgcgcccagcctttttttttttttttttttccttcaagagatggtttagctctatgttgtccaggctggtttccaactcctgagctcaagggatccccctgagtggttgggactactggcatgcaccactgGAAACCCTTATTACTACTGTTGACTTTAATTCCAGTTAGTGGACTAGTTGAGTGATCCCAGCCATCTCAGCACTGGCCAAAGCCTTCCTGTGTTACCTCTACATGTAG</dnaseq>|
 
sequence = <dnaseq>ATGGCCCAGCAGTCGGACAAGGCCGTGAAGTGCTGCGCCCTGGAGGAGATTCAAAGCACAATCATAGCAAAAGCACCTGGGTGTACGATTTGACCAAATTCCTGGCAGAGCATCCTGGTGGGAAAGAAGTCTTAAGGGAATAAGCTGGAGAGATGCTACTGAAAACTTTGAGGATGTCGGGCACTCTACAGATGCCAGAGAATTCTCCAAATCATAAATCATTGGGGTTTCATCTGGATGACAGATAAAGTTAACTAAGCCTTCAGAAttttttttttttttttgagacggagtctcactctgttgcccaggcgggagtgcaatggcacgatctcagctcaccgcgacctccgcctcccaggttcaagcgattcccctgcctcagcctctcgagtagctgggattacaggtgcgcaccaccatgcctggctaatttttgtattttttagtagagactgggtttcaccatgttggtcaggctggtctcgaactcctgacctcgtgatccgcccaccttggcctcccaaagtgctaggattacaagcgtgagctactgcgcccagcctttttttttttttttttttccttcaagagatggtttagctctatgttgtccaggctggtttccaactcctgagctcaagggatccccctgagtggttgggactactggcatgcaccactgGAAACCCTTATTACTACTGTTGACTTTAATTCCAGTTAGTGGACTAGTTGAGTGATCCCAGCCATCTCAGCACTGGCCAAAGCCTTCCTGTGTTACCTCTACATGTAG</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:NONHSAG029776]][[Category:Transcripts]]

Latest revision as of 23:38, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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You can also add sub-section(s) at will.

Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT075372

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

793 nt

Genomic location

chr2+:170646603..170647395

Exon number

1

Exons

170646603..170647395

Genome context

Sequence
000001 ATGGCCCAGC AGTCGGACAA GGCCGTGAAG TGCTGCGCCC TGGAGGAGAT TCAAAGCACA ATCATAGCAA AAGCACCTGG 000080
000081 GTGTACGATT TGACCAAATT CCTGGCAGAG CATCCTGGTG GGAAAGAAGT CTTAAGGGAA TAAGCTGGAG AGATGCTACT 000160
000161 GAAAACTTTG AGGATGTCGG GCACTCTACA GATGCCAGAG AATTCTCCAA ATCATAAATC ATTGGGGTTT CATCTGGATG 000240
000241 ACAGATAAAG TTAACTAAGC CTTCAGAAtt tttttttttt ttttgagacg gagtctcact ctgttgccca ggcgggagtg 000320
000321 caatggcacg atctcagctc accgcgacct ccgcctccca ggttcaagcg attcccctgc ctcagcctct cgagtagctg 000400
000401 ggattacagg tgcgcaccac catgcctggc taatttttgt attttttagt agagactggg tttcaccatg ttggtcaggc 000480
000481 tggtctcgaa ctcctgacct cgtgatccgc ccaccttggc ctcccaaagt gctaggatta caagcgtgag ctactgcgcc 000560
000561 cagccttttt tttttttttt ttttccttca agagatggtt tagctctatg ttgtccaggc tggtttccaa ctcctgagct 000640
000641 caagggatcc ccctgagtgg ttgggactac tggcatgcac cactgGAAAC CCTTATTACT ACTGTTGACT TTAATTCCAG 000720
000721 TTAGTGGACT AGTTGAGTGA TCCCAGCCAT CTCAGCACTG GCCAAAGCCT TCCTGTGTTA CCTCTACATG TAG
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Predicted Small Protein

Name NONHSAT075372_smProtein_152:247
Length 32
Molecular weight 3568.1132
Aromaticity 0.0322580645161
Instability index 74.264516129
Isoelectric point 8.38397216797
Runs 5
Runs residual 0.0399865591398
Runs probability 0.012012012012
Amino acid sequence MLLKTLRMSGTLQMPENSPNHKSLGFHLDDR
Secondary structure LHHHHHHLLLLLLLLLLLLLLLLLLEEELLL
PRMN -
PiMo -