Difference between revisions of "NONHSAT075372"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
(One intermediate revision by one other user not shown) | |||
Line 42: | Line 42: | ||
sequence = <dnaseq>ATGGCCCAGCAGTCGGACAAGGCCGTGAAGTGCTGCGCCCTGGAGGAGATTCAAAGCACAATCATAGCAAAAGCACCTGGGTGTACGATTTGACCAAATTCCTGGCAGAGCATCCTGGTGGGAAAGAAGTCTTAAGGGAATAAGCTGGAGAGATGCTACTGAAAACTTTGAGGATGTCGGGCACTCTACAGATGCCAGAGAATTCTCCAAATCATAAATCATTGGGGTTTCATCTGGATGACAGATAAAGTTAACTAAGCCTTCAGAAttttttttttttttttgagacggagtctcactctgttgcccaggcgggagtgcaatggcacgatctcagctcaccgcgacctccgcctcccaggttcaagcgattcccctgcctcagcctctcgagtagctgggattacaggtgcgcaccaccatgcctggctaatttttgtattttttagtagagactgggtttcaccatgttggtcaggctggtctcgaactcctgacctcgtgatccgcccaccttggcctcccaaagtgctaggattacaagcgtgagctactgcgcccagcctttttttttttttttttttccttcaagagatggtttagctctatgttgtccaggctggtttccaactcctgagctcaagggatccccctgagtggttgggactactggcatgcaccactgGAAACCCTTATTACTACTGTTGACTTTAATTCCAGTTAGTGGACTAGTTGAGTGATCCCAGCCATCTCAGCACTGGCCAAAGCCTTCCTGTGTTACCTCTACATGTAG</dnaseq>| | sequence = <dnaseq>ATGGCCCAGCAGTCGGACAAGGCCGTGAAGTGCTGCGCCCTGGAGGAGATTCAAAGCACAATCATAGCAAAAGCACCTGGGTGTACGATTTGACCAAATTCCTGGCAGAGCATCCTGGTGGGAAAGAAGTCTTAAGGGAATAAGCTGGAGAGATGCTACTGAAAACTTTGAGGATGTCGGGCACTCTACAGATGCCAGAGAATTCTCCAAATCATAAATCATTGGGGTTTCATCTGGATGACAGATAAAGTTAACTAAGCCTTCAGAAttttttttttttttttgagacggagtctcactctgttgcccaggcgggagtgcaatggcacgatctcagctcaccgcgacctccgcctcccaggttcaagcgattcccctgcctcagcctctcgagtagctgggattacaggtgcgcaccaccatgcctggctaatttttgtattttttagtagagactgggtttcaccatgttggtcaggctggtctcgaactcctgacctcgtgatccgcccaccttggcctcccaaagtgctaggattacaagcgtgagctactgcgcccagcctttttttttttttttttttccttcaagagatggtttagctctatgttgtccaggctggtttccaactcctgagctcaagggatccccctgagtggttgggactactggcatgcaccactgGAAACCCTTATTACTACTGTTGACTTTAATTCCAGTTAGTGGACTAGTTGAGTGATCCCAGCCATCTCAGCACTGGCCAAAGCCTTCCTGTGTTACCTCTACATGTAG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG029776]][[Category:Transcripts]] |
Latest revision as of 23:38, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT075372 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
793 nt |
Genomic location |
chr2+:170646603..170647395 |
Exon number |
1 |
Exons |
170646603..170647395 |
Genome context |
|
Sequence |
000001 ATGGCCCAGC AGTCGGACAA GGCCGTGAAG TGCTGCGCCC TGGAGGAGAT TCAAAGCACA ATCATAGCAA AAGCACCTGG 000080
000081 GTGTACGATT TGACCAAATT CCTGGCAGAG CATCCTGGTG GGAAAGAAGT CTTAAGGGAA TAAGCTGGAG AGATGCTACT 000160 000161 GAAAACTTTG AGGATGTCGG GCACTCTACA GATGCCAGAG AATTCTCCAA ATCATAAATC ATTGGGGTTT CATCTGGATG 000240 000241 ACAGATAAAG TTAACTAAGC CTTCAGAAtt tttttttttt ttttgagacg gagtctcact ctgttgccca ggcgggagtg 000320 000321 caatggcacg atctcagctc accgcgacct ccgcctccca ggttcaagcg attcccctgc ctcagcctct cgagtagctg 000400 000401 ggattacagg tgcgcaccac catgcctggc taatttttgt attttttagt agagactggg tttcaccatg ttggtcaggc 000480 000481 tggtctcgaa ctcctgacct cgtgatccgc ccaccttggc ctcccaaagt gctaggatta caagcgtgag ctactgcgcc 000560 000561 cagccttttt tttttttttt ttttccttca agagatggtt tagctctatg ttgtccaggc tggtttccaa ctcctgagct 000640 000641 caagggatcc ccctgagtgg ttgggactac tggcatgcac cactgGAAAC CCTTATTACT ACTGTTGACT TTAATTCCAG 000720 000721 TTAGTGGACT AGTTGAGTGA TCCCAGCCAT CTCAGCACTG GCCAAAGCCT TCCTGTGTTA CCTCTACATG TAG |
Predicted Small Protein
Name | NONHSAT075372_smProtein_152:247 |
Length | 32 |
Molecular weight | 3568.1132 |
Aromaticity | 0.0322580645161 |
Instability index | 74.264516129 |
Isoelectric point | 8.38397216797 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.012012012012 |
Amino acid sequence | MLLKTLRMSGTLQMPENSPNHKSLGFHLDDR |
Secondary structure | LHHHHHHLLLLLLLLLLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |