Difference between revisions of "NONHSAT076156"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTAGACAAAGACAGTAGCAGCCCCAGATCTACAGAAAATGCACAGATATTGttaggtttgtgcaaaagtaattgtggtttttgccactgaaagcaatgacaattacttttccaccaacctaaAACATTATTATTCCTGTTCTTTATTTTTTGGACTTATTCAGTGTTCAACATGGGATACTCTGTGGTGTTAGAGCTGCAGGAATGCTCCTCCAGCTATGGCACATTTGGCAAAGTGTATGGCAACACCTTCCTTCAGTGGAAAGGGCCACTCTTGAAGAACATAACACCTTGAAGAAGCAGGTGTTCCTTATGAACTCCTCCATGCTGGAAATCAAAGATGTGAGTGTCGGTTTCACTGTCTTCTGTGTATCCAGCTGTCTTAAGAACAGCTTGCCATCCTGGAAGAGTTCCAGTTCTTTGCAAATGACAGTGCAAGTCTTTTCCTTTTTCTAATCGATGGCTTCCTCAAATACCTGAGTGCTGTTCTCTGTTTGCATTTAATTTGATAAATGATGTTGACACCCTCCATTGAATTCTAAGTGGAATAATATCAGGAAGAGACACAAGTCTTGTGTTATGTATTCTCAAATTAGACTGGGAATGTCTTCAAATGACCTAAATAGGATGCTTTGATTCCCAGATACTTGTATACTGACCATCTATACCAATATATTCAGCCTTGCCTTTGGTCAGGATGTTCACCTTCTGATTCATCACCACTCTCTGCCTCACATTTTAATTGCACTGGTTACTTAAGGATTGTTGTTTGTAGTACCTTATTATGGCTGTATCATGACTATACCAGTAACCTCAGCACTGGACACAGAAATGGAAATATAAAGTATATGCTGGGGTTTGCTATTGTATCTACAATTACCAGTCAGTTCTACTTGTCTTGATTTTTTTCCTCAGAAAGAGAATAAAATGGCAGGCAATAATAAATTATTTAAAAGTCTAAAATGAAAATCAGCCAAATGGAATATAAATGTCTTTCAGACATTCTATATACCTGGTGATACCATTTAATTGGCCTCATGTAAACTAGCTTATTCATTCTTTTGTGCCAGTAAATAGCTGTAACTGGGGCAATGGCTACTTGTTACTTCAACAAAAATTAAAAAGCCCTCCTGATCATCCAATTCTTTCATCTCTCTTAATTATTTTTTCTACTACTGTTGTAAAAGGGTAATTTCTAATCACTGGGGTGAGAATTCCAAGCATCATTTTCACATATACTTATAACACTCTGAGAGAGAAGCACAGAGTGCTTGTA</dnaseq>| | sequence = <dnaseq>CTAGACAAAGACAGTAGCAGCCCCAGATCTACAGAAAATGCACAGATATTGttaggtttgtgcaaaagtaattgtggtttttgccactgaaagcaatgacaattacttttccaccaacctaaAACATTATTATTCCTGTTCTTTATTTTTTGGACTTATTCAGTGTTCAACATGGGATACTCTGTGGTGTTAGAGCTGCAGGAATGCTCCTCCAGCTATGGCACATTTGGCAAAGTGTATGGCAACACCTTCCTTCAGTGGAAAGGGCCACTCTTGAAGAACATAACACCTTGAAGAAGCAGGTGTTCCTTATGAACTCCTCCATGCTGGAAATCAAAGATGTGAGTGTCGGTTTCACTGTCTTCTGTGTATCCAGCTGTCTTAAGAACAGCTTGCCATCCTGGAAGAGTTCCAGTTCTTTGCAAATGACAGTGCAAGTCTTTTCCTTTTTCTAATCGATGGCTTCCTCAAATACCTGAGTGCTGTTCTCTGTTTGCATTTAATTTGATAAATGATGTTGACACCCTCCATTGAATTCTAAGTGGAATAATATCAGGAAGAGACACAAGTCTTGTGTTATGTATTCTCAAATTAGACTGGGAATGTCTTCAAATGACCTAAATAGGATGCTTTGATTCCCAGATACTTGTATACTGACCATCTATACCAATATATTCAGCCTTGCCTTTGGTCAGGATGTTCACCTTCTGATTCATCACCACTCTCTGCCTCACATTTTAATTGCACTGGTTACTTAAGGATTGTTGTTTGTAGTACCTTATTATGGCTGTATCATGACTATACCAGTAACCTCAGCACTGGACACAGAAATGGAAATATAAAGTATATGCTGGGGTTTGCTATTGTATCTACAATTACCAGTCAGTTCTACTTGTCTTGATTTTTTTCCTCAGAAAGAGAATAAAATGGCAGGCAATAATAAATTATTTAAAAGTCTAAAATGAAAATCAGCCAAATGGAATATAAATGTCTTTCAGACATTCTATATACCTGGTGATACCATTTAATTGGCCTCATGTAAACTAGCTTATTCATTCTTTTGTGCCAGTAAATAGCTGTAACTGGGGCAATGGCTACTTGTTACTTCAACAAAAATTAAAAAGCCCTCCTGATCATCCAATTCTTTCATCTCTCTTAATTATTTTTTCTACTACTGTTGTAAAAGGGTAATTTCTAATCACTGGGGTGAGAATTCCAAGCATCATTTTCACATATACTTATAACACTCTGAGAGAGAAGCACAGAGTGCTTGTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG030131]][[Category:Transcripts]] |
Latest revision as of 23:42, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT076156 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
1275 nt |
| Genomic location |
chr2+:194121208..194122482 |
| Exon number |
1 |
| Exons |
194121208..194122482 |
| Genome context |
|
| Sequence |
000001 CTAGACAAAG ACAGTAGCAG CCCCAGATCT ACAGAAAATG CACAGATATT Gttaggtttg tgcaaaagta attgtggttt 000080
000081 ttgccactga aagcaatgac aattactttt ccaccaacct aaAACATTAT TATTCCTGTT CTTTATTTTT TGGACTTATT 000160 000161 CAGTGTTCAA CATGGGATAC TCTGTGGTGT TAGAGCTGCA GGAATGCTCC TCCAGCTATG GCACATTTGG CAAAGTGTAT 000240 000241 GGCAACACCT TCCTTCAGTG GAAAGGGCCA CTCTTGAAGA ACATAACACC TTGAAGAAGC AGGTGTTCCT TATGAACTCC 000320 000321 TCCATGCTGG AAATCAAAGA TGTGAGTGTC GGTTTCACTG TCTTCTGTGT ATCCAGCTGT CTTAAGAACA GCTTGCCATC 000400 000401 CTGGAAGAGT TCCAGTTCTT TGCAAATGAC AGTGCAAGTC TTTTCCTTTT TCTAATCGAT GGCTTCCTCA AATACCTGAG 000480 000481 TGCTGTTCTC TGTTTGCATT TAATTTGATA AATGATGTTG ACACCCTCCA TTGAATTCTA AGTGGAATAA TATCAGGAAG 000560 000561 AGACACAAGT CTTGTGTTAT GTATTCTCAA ATTAGACTGG GAATGTCTTC AAATGACCTA AATAGGATGC TTTGATTCCC 000640 000641 AGATACTTGT ATACTGACCA TCTATACCAA TATATTCAGC CTTGCCTTTG GTCAGGATGT TCACCTTCTG ATTCATCACC 000720 000721 ACTCTCTGCC TCACATTTTA ATTGCACTGG TTACTTAAGG ATTGTTGTTT GTAGTACCTT ATTATGGCTG TATCATGACT 000800 000801 ATACCAGTAA CCTCAGCACT GGACACAGAA ATGGAAATAT AAAGTATATG CTGGGGTTTG CTATTGTATC TACAATTACC 000880 000881 AGTCAGTTCT ACTTGTCTTG ATTTTTTTCC TCAGAAAGAG AATAAAATGG CAGGCAATAA TAAATTATTT AAAAGTCTAA 000960 000961 AATGAAAATC AGCCAAATGG AATATAAATG TCTTTCAGAC ATTCTATATA CCTGGTGATA CCATTTAATT GGCCTCATGT 001040 001041 AAACTAGCTT ATTCATTCTT TTGTGCCAGT AAATAGCTGT AACTGGGGCA ATGGCTACTT GTTACTTCAA CAAAAATTAA 001120 001121 AAAGCCCTCC TGATCATCCA ATTCTTTCAT CTCTCTTAAT TATTTTTTCT ACTACTGTTG TAAAAGGGTA ATTTCTAATC 001200 001201 ACTGGGGTGA GAATTCCAAG CATCATTTTC ACATATACTT ATAACACTCT GAGAGAGAAG CACAGAGTGC TTGTA |
Predicted Small Protein
| Name | NONHSAT076156_smProtein_203:454 |
| Length | 84 |
| Molecular weight | 9637.1442 |
| Aromaticity | 0.120481927711 |
| Instability index | 64.0156626506 |
| Isoelectric point | 7.84722900391 |
| Runs | 14 |
| Runs residual | 0.0286479250335 |
| Runs probability | 0.0416698210816 |
| Amino acid sequence | MLLQLWHIWQSVWQHLPSVERATLEEHNTLKKQVFLMNSSMLEIKDVSVGFTVFCVSSCL KNSLPSWKSSSSLQMTVQVFSFF |
| Secondary structure | LHHHHHHHHHHHHHHLLHHHHHLHHHHHHHLLEEEEEELLEEEEEEEEEEEEEEEEEHHH HLLLLLLLLLLLEEEEEEEEEEL |
| PRMN | - |
| PiMo | - |
