Difference between revisions of "NONHSAT077677"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GACTGAcggcgccggccgcccctgcccgtcgcccgcccgctgctgccgcccgcccggggTGTGGAGCCCGGCCGCTGCTCGCGGGCTGAGTGTCTGTCGCTGCTGCCGCCTCCACCCAGCCTCCGCCATGGACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCTCGCCGCGCCCGGCTGCCGGGAAAGAAGCTCAGAAAGGACCCCTGCTCTTTGATGACCTCCCTCCGGCCAGCAGTACTGACTCAGGATCAGGGGGACCTTTGCTTTTTGATGATCTCCCACCCGCTAGCAGTGGCGATTCAGGTTCTCTTGCCACATCAATATCCCAGATGGTAAAGACTGAAGGGAAAGGAGCAAAGAGAAAAACCTCCGAGGAAGAGAAGAATGGCAGTGAAGAGCTTGTGGAAAAGAAAGTTTGTAAAGGTTTTCAGACAATTTGAAAACAAATGTATTAGACTTCATATTTTAAAACAACCCAGAGCAAAACCAGTTTCAGCTTTCTAATAATACTTTCTTTTTATGTCTGTATTTAAGAAATAAGTAGGGTTCCCTTTTTGCAAATGAATTTCCAAGTTTCTCTGTGCT</dnaseq>| | sequence = <dnaseq>GACTGAcggcgccggccgcccctgcccgtcgcccgcccgctgctgccgcccgcccggggTGTGGAGCCCGGCCGCTGCTCGCGGGCTGAGTGTCTGTCGCTGCTGCCGCCTCCACCCAGCCTCCGCCATGGACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCTCGCCGCGCCCGGCTGCCGGGAAAGAAGCTCAGAAAGGACCCCTGCTCTTTGATGACCTCCCTCCGGCCAGCAGTACTGACTCAGGATCAGGGGGACCTTTGCTTTTTGATGATCTCCCACCCGCTAGCAGTGGCGATTCAGGTTCTCTTGCCACATCAATATCCCAGATGGTAAAGACTGAAGGGAAAGGAGCAAAGAGAAAAACCTCCGAGGAAGAGAAGAATGGCAGTGAAGAGCTTGTGGAAAAGAAAGTTTGTAAAGGTTTTCAGACAATTTGAAAACAAATGTATTAGACTTCATATTTTAAAACAACCCAGAGCAAAACCAGTTTCAGCTTTCTAATAATACTTTCTTTTTATGTCTGTATTTAAGAAATAAGTAGGGTTCCCTTTTTGCAAATGAATTTCCAAGTTTCTCTGTGCT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG030935]][[Category:Transcripts]] |
Latest revision as of 23:50, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT077677 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
587 nt |
| Genomic location |
chr2-:239098332..239112321 |
| Exon number |
4 |
| Exons |
239098332..239098613,239102916..239102972,239103446..239103511,239112140..239112321 |
| Genome context |
|
| Sequence |
000001 GACTGAcggc gccggccgcc cctgcccgtc gcccgcccgc tgctgccgcc cgcccggggT GTGGAGCCCG GCCGCTGCTC 000080
000081 GCGGGCTGAG TGTCTGTCGC TGCTGCCGCC TCCACCCAGC CTCCGCCATG GACCTCTTCG GGGACCTGCC GGAGCCCGAG 000160 000161 CGCTCGCCGC GCCCGGCTGC CGGGAAAGAA GCTCAGAAAG GACCCCTGCT CTTTGATGAC CTCCCTCCGG CCAGCAGTAC 000240 000241 TGACTCAGGA TCAGGGGGAC CTTTGCTTTT TGATGATCTC CCACCCGCTA GCAGTGGCGA TTCAGGTTCT CTTGCCACAT 000320 000321 CAATATCCCA GATGGTAAAG ACTGAAGGGA AAGGAGCAAA GAGAAAAACC TCCGAGGAAG AGAAGAATGG CAGTGAAGAG 000400 000401 CTTGTGGAAA AGAAAGTTTG TAAAGGTTTT CAGACAATTT GAAAACAAAT GTATTAGACT TCATATTTTA AAACAACCCA 000480 000481 GAGCAAAACC AGTTTCAGCT TTCTAATAAT ACTTTCTTTT TATGTCTGTA TTTAAGAAAT AAGTAGGGTT CCCTTTTTGC 000560 000561 AAATGAATTT CCAAGTTTCT CTGTGCT |
Predicted Small Protein
| Name | NONHSAT077677_smProtein_215:337 |
| Length | 41 |
| Molecular weight | 4560.3683 |
| Aromaticity | 0.075 |
| Instability index | 42.25 |
| Isoelectric point | 6.68780517578 |
| Runs | 6 |
| Runs residual | 0.0280241935484 |
| Runs probability | 0.0474003415179 |
| Amino acid sequence | MTSLRPAVLTQDQGDLCFLMISHPLAVAIQVLLPHQYPRW |
| Secondary structure | LLLLLLLLLLLLLLLHHHHEELLHHHHHHHHHLLLLLLLL |
| PRMN | - |
| PiMo | - |
