Difference between revisions of "NONHSAT095150"

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sequence = <dnaseq>AGGACTGGTCCTGCTCGCTCCTCGTGGCCTCCCTCGCGGGCGCCTTCGGCTCCTCCTTCCTCTACGGCTACAACCTGTCGGTGGTGAATGCCCCCACCCCGTACATCAAGGCCTTTTACAATGAGTCATGGGAAAGAAGGCATGGACGTCCAATAGACCCAGACACTCTGACTTTGCTCTGGTCTGTGACTGTGTCCATATTCGCCATCGGTGGACTTGTGGGGACGTTAATTGTGAAGATGATTGGAAAGGTTCTTGGGAGCATCCTGGGAGCCAGTGAGCAGTGTGTGGAAAGAGTAGAGCTTCTCCAAGTGATGGAGGAGTCGTCACATCAATCTGAtggggccagaacattcgtgtcttaacttgaatcatgtgtcttccacttactagctgtgtgcccttggccaaatcatttaatttatttgagcctcaattttcttatctgtaaaatagggatgatagtttctacctgcagggaatgttacaagagttagaccaaatgaatgGAAGGAGAATGGCCATGAGTTGTAGCTGAATAAATAAAAATTCTTGTCATTGACCACA</dnaseq>|
 
sequence = <dnaseq>AGGACTGGTCCTGCTCGCTCCTCGTGGCCTCCCTCGCGGGCGCCTTCGGCTCCTCCTTCCTCTACGGCTACAACCTGTCGGTGGTGAATGCCCCCACCCCGTACATCAAGGCCTTTTACAATGAGTCATGGGAAAGAAGGCATGGACGTCCAATAGACCCAGACACTCTGACTTTGCTCTGGTCTGTGACTGTGTCCATATTCGCCATCGGTGGACTTGTGGGGACGTTAATTGTGAAGATGATTGGAAAGGTTCTTGGGAGCATCCTGGGAGCCAGTGAGCAGTGTGTGGAAAGAGTAGAGCTTCTCCAAGTGATGGAGGAGTCGTCACATCAATCTGAtggggccagaacattcgtgtcttaacttgaatcatgtgtcttccacttactagctgtgtgcccttggccaaatcatttaatttatttgagcctcaattttcttatctgtaaaatagggatgatagtttctacctgcagggaatgttacaagagttagaccaaatgaatgGAAGGAGAATGGCCATGAGTTGTAGCTGAATAAATAAAAATTCTTGTCATTGACCACA</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG037466]][[Category:Transcripts]]

Latest revision as of 00:54, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT095150

Source

NONCODE4.0

Same with

,

Classification

sense

Length

567 nt

Genomic location

chr4-:9997293..10020699

Exon number

3

Exons

9997293..9997597,9998405..9998565,10020599..10020699

Genome context

Sequence
000001 AGGACTGGTC CTGCTCGCTC CTCGTGGCCT CCCTCGCGGG CGCCTTCGGC TCCTCCTTCC TCTACGGCTA CAACCTGTCG 000080
000081 GTGGTGAATG CCCCCACCCC GTACATCAAG GCCTTTTACA ATGAGTCATG GGAAAGAAGG CATGGACGTC CAATAGACCC 000160
000161 AGACACTCTG ACTTTGCTCT GGTCTGTGAC TGTGTCCATA TTCGCCATCG GTGGACTTGT GGGGACGTTA ATTGTGAAGA 000240
000241 TGATTGGAAA GGTTCTTGGG AGCATCCTGG GAGCCAGTGA GCAGTGTGTG GAAAGAGTAG AGCTTCTCCA AGTGATGGAG 000320
000321 GAGTCGTCAC ATCAATCTGA tggggccaga acattcgtgt cttaacttga atcatgtgtc ttccacttac tagctgtgtg 000400
000401 cccttggcca aatcatttaa tttatttgag cctcaatttt cttatctgta aaatagggat gatagtttct acctgcaggg 000480
000481 aatgttacaa gagttagacc aaatgaatgG AAGGAGAATG GCCATGAGTT GTAGCTGAAT AAATAAAAAT TCTTGTCATT 000560
000561 GACCACA
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Predicted Small Protein

Name NONHSAT095150_smProtein_239:364
Length 42
Molecular weight 4421.9813
Aromaticity 0.0243902439024
Instability index 49.0731707317
Isoelectric point 4.69805908203
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0258157316981
Amino acid sequence MIGKVLGSILGASEQCVERVELLQVMEESSHQSDGARTFVS
Secondary structure LLHHHHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLEEEEL
PRMN -
PiMo -