Difference between revisions of "NONHSAT096764"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>TTGTCTAAGAAATGGGCTTTTTTGTTTCTTATGCTGACAGTTGTATTTTAGCCCTGAATCCTGCGAGAATGTGCTGGTGTGGCCGATGAAATACAGTCTTTGTATCAATTTAATGTTGATACTTGATGAACTTGCTCAGAACACCATGAGGTAACTGTGCTTGTCACCTTCAGCTTCCATCCTCATTGATTCCAACAATCTGCTGTTAAATTTGAGGTTTATCCCACATCTTTTACTCAGAATGAACTTGATTTCCTTTTTATGAAATTGATCAATATATGGATGTATAAGTTTCCAAAGAGTACATTGTTGGCATATGATTCAAAGATGCAAAAACTACATATCATGAATGTTCTGATACTGTTCAAAAGCTCTTTGAGTATGCTGTTTTGAACAAGAAAATTATGAGGAACAGGATTCCAGAATTTATGTCATTCTTGCAGATGTCAGTTCTCAGTAGTGAGCTGCTATCTGAACAGCTTAGTCTGTTAAACATTTGTTATACATTTGGTCTACTATCATCAATTTACAACTGGCAGTATGTACCAAGAACTCTGTGGAGGACTTACATTACCTCCTTCTGATGTAACTGTTGTCATATCAGAACTTAGTACAAAAATACATTTGTAGAAAGGTGAAAAGTCTGTTGCATTTTCTTCATTTTGACTTTGCATTTGAGATTTTTAACAAAAAGAAGTGGGATCAGTTTTACAGTGAAGTATTAG</dnaseq>| | sequence = <dnaseq>TTGTCTAAGAAATGGGCTTTTTTGTTTCTTATGCTGACAGTTGTATTTTAGCCCTGAATCCTGCGAGAATGTGCTGGTGTGGCCGATGAAATACAGTCTTTGTATCAATTTAATGTTGATACTTGATGAACTTGCTCAGAACACCATGAGGTAACTGTGCTTGTCACCTTCAGCTTCCATCCTCATTGATTCCAACAATCTGCTGTTAAATTTGAGGTTTATCCCACATCTTTTACTCAGAATGAACTTGATTTCCTTTTTATGAAATTGATCAATATATGGATGTATAAGTTTCCAAAGAGTACATTGTTGGCATATGATTCAAAGATGCAAAAACTACATATCATGAATGTTCTGATACTGTTCAAAAGCTCTTTGAGTATGCTGTTTTGAACAAGAAAATTATGAGGAACAGGATTCCAGAATTTATGTCATTCTTGCAGATGTCAGTTCTCAGTAGTGAGCTGCTATCTGAACAGCTTAGTCTGTTAAACATTTGTTATACATTTGGTCTACTATCATCAATTTACAACTGGCAGTATGTACCAAGAACTCTGTGGAGGACTTACATTACCTCCTTCTGATGTAACTGTTGTCATATCAGAACTTAGTACAAAAATACATTTGTAGAAAGGTGAAAAGTCTGTTGCATTTTCTTCATTTTGACTTTGCATTTGAGATTTTTAACAAAAAGAAGTGGGATCAGTTTTACAGTGAAGTATTAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG038126]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 00:59, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT096764 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
725 nt |
| Genomic location |
chr4+:70272649..70273373 |
| Exon number |
1 |
| Exons |
70272649..70273373 |
| Genome context |
|
| Sequence |
000001 TTGTCTAAGA AATGGGCTTT TTTGTTTCTT ATGCTGACAG TTGTATTTTA GCCCTGAATC CTGCGAGAAT GTGCTGGTGT 000080
000081 GGCCGATGAA ATACAGTCTT TGTATCAATT TAATGTTGAT ACTTGATGAA CTTGCTCAGA ACACCATGAG GTAACTGTGC 000160 000161 TTGTCACCTT CAGCTTCCAT CCTCATTGAT TCCAACAATC TGCTGTTAAA TTTGAGGTTT ATCCCACATC TTTTACTCAG 000240 000241 AATGAACTTG ATTTCCTTTT TATGAAATTG ATCAATATAT GGATGTATAA GTTTCCAAAG AGTACATTGT TGGCATATGA 000320 000321 TTCAAAGATG CAAAAACTAC ATATCATGAA TGTTCTGATA CTGTTCAAAA GCTCTTTGAG TATGCTGTTT TGAACAAGAA 000400 000401 AATTATGAGG AACAGGATTC CAGAATTTAT GTCATTCTTG CAGATGTCAG TTCTCAGTAG TGAGCTGCTA TCTGAACAGC 000480 000481 TTAGTCTGTT AAACATTTGT TATACATTTG GTCTACTATC ATCAATTTAC AACTGGCAGT ATGTACCAAG AACTCTGTGG 000560 000561 AGGACTTACA TTACCTCCTT CTGATGTAAC TGTTGTCATA TCAGAACTTA GTACAAAAAT ACATTTGTAG AAAGGTGAAA 000640 000641 AGTCTGTTGC ATTTTCTTCA TTTTGACTTT GCATTTGAGA TTTTTAACAA AAAGAAGTGG GATCAGTTTT ACAGTGAAGT 000720 000721 ATTAG |
Predicted Small Protein
| Name | NONHSAT096764_smProtein_404:583 |
| Length | 60 |
| Molecular weight | 7089.1956 |
| Aromaticity | 0.169491525424 |
| Instability index | 60.9084745763 |
| Isoelectric point | 7.91619873047 |
| Runs | 10 |
| Runs residual | 0.0250349867828 |
| Runs probability | 0.0597244303126 |
| Amino acid sequence | MRNRIPEFMSFLQMSVLSSELLSEQLSLLNICYTFGLLSSIYNWQYVPRTLWRTYITSF |
| Secondary structure | LLLLLHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHLHHHHHHLLLLLLHHHHHHHEELL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
| PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |
