Difference between revisions of "NONHSAT098562"

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sequence = <dnaseq>TATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTTAGAAATAGGTTTGGGTTACATGAAAGCTTTATTTTACTGGAAACTTGGAATTTTAAGTGTTACTGTAATGTCTTATAATTTTGCTTAAAACAGTAGTCATTTTTGCTTATTCACATCTGAATATTTTCATCATTATGTAAAATTTAATGCCAGTTTTTCAGTTGGTAAGCTCTGAAATATTTTTAAAGTTTTTGTAATGAAGTTTGTGGTATATGTTTACAGTGAAATATATTCTTGTATGGGATGAATAGTAATTTGGGATGGTAACCTGATTCATTTTATTTTAAACAGCAGAATTGGCTGGTAATAAAGGGAAAAATTTCTTAACTTCATAAGTAATACTTGGTAATATAGAGATAAATTGAAAAATACCCAGA</dnaseq>|
 
sequence = <dnaseq>TATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTTAGAAATAGGTTTGGGTTACATGAAAGCTTTATTTTACTGGAAACTTGGAATTTTAAGTGTTACTGTAATGTCTTATAATTTTGCTTAAAACAGTAGTCATTTTTGCTTATTCACATCTGAATATTTTCATCATTATGTAAAATTTAATGCCAGTTTTTCAGTTGGTAAGCTCTGAAATATTTTTAAAGTTTTTGTAATGAAGTTTGTGGTATATGTTTACAGTGAAATATATTCTTGTATGGGATGAATAGTAATTTGGGATGGTAACCTGATTCATTTTATTTTAAACAGCAGAATTGGCTGGTAATAAAGGGAAAAATTTCTTAACTTCATAAGTAATACTTGGTAATATAGAGATAAATTGAAAAATACCCAGA</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG039002]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 01:07, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT098562

Source

NONCODE4.0

Same with

,

Classification

sense

Length

529 nt

Genomic location

chr4+:144464786..144465509

Exon number

2

Exons

144464786..144464810,144465006..144465509

Genome context

Sequence
000001 TATTTTGGAA AGAGGTGCAA AGAAGACTGC AGAGATGAAT GAAAAGCTCT CCAAGATGGG CGAAAGTTCA CTTAGAAACT 000080
000081 TTACAATGGA TACAGAGTCA AGTGTTTATA ACTTCGAAGG AGAAGACTAT AGAGAAAAAC AAAAGGTAAT TTAGAAATAG 000160
000161 GTTTGGGTTA CATGAAAGCT TTATTTTACT GGAAACTTGG AATTTTAAGT GTTACTGTAA TGTCTTATAA TTTTGCTTAA 000240
000241 AACAGTAGTC ATTTTTGCTT ATTCACATCT GAATATTTTC ATCATTATGT AAAATTTAAT GCCAGTTTTT CAGTTGGTAA 000320
000321 GCTCTGAAAT ATTTTTAAAG TTTTTGTAAT GAAGTTTGTG GTATATGTTT ACAGTGAAAT ATATTCTTGT ATGGGATGAA 000400
000401 TAGTAATTTG GGATGGTAAC CTGATTCATT TTATTTTAAA CAGCAGAATT GGCTGGTAAT AAAGGGAAAA ATTTCTTAAC 000480
000481 TTCATAAGTA ATACTTGGTA ATATAGAGAT AAATTGAAAA ATACCCAGA
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Predicted Small Protein

Name NONHSAT098562_smProtein_38:148
Length 37
Molecular weight 4357.0456
Aromaticity 0.0833333333333
Instability index 86.9166666667
Isoelectric point 10.2888793945
Runs 6
Runs residual 0.0137917637918
Runs probability 0.0304569275158
Amino acid sequence MKSSPRWAKVHLETLQWIQSQVFITSKEKTIEKNKR
Secondary structure LLLLLHHHHHHHHHHHHHHHHHEEELLHHHHHHLLL
PRMN -
PiMo -