Difference between revisions of "NONHSAT103576"

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sequence = <dnaseq>ACCAATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTACCTCTCTCTGAATGTCTAAAGTGAAGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAA</dnaseq>|
 
sequence = <dnaseq>ACCAATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTACCTCTCTCTGAATGTCTAAAGTGAAGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAA</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG041439]][[Category:Transcripts]]

Latest revision as of 01:28, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT103576

Source

NONCODE4.0

Same with

,

Classification

sense

Length

632 nt

Genomic location

chr5+:125759098..125807996

Exon number

4

Exons

125759098..125759381,125801069..125801237,125805369..125805480,125807930..125807996

Genome context

Sequence
000001 ACCAATCGCG CCCGCTCCGA CGTGTCCAGG TCCGCGGCCC CGGGAGCTTG GCGCGGCCCG GCCTGGATGC GCTGGGCGGA 000080
000081 GGGTGCAGGG GAGGGCACGG CGCCGCTTGC TTGGCCTGCG CACCCGGACC TAGAAGCCGG GACGAGCCGG GGCAGAGCCA 000160
000161 GGCGCGCGGA AGTCTGAAGG TGCCCTCCAG ACACGGCCCC GATGACTGAA CTACAGCAAG ATGTGGAAGA CACAAAGCCT 000240
000241 GCGAAAGTGC TCGGGAAGAG GGAGAGCAAA CTTGGCTCAG CCCACTACCT CTCTCTGAAT GTCTAAAGTG AAGCGGTTTC 000320
000321 CTTTCTTCTT CAGCTCAGAG GCTGAGAATG GTGTGGAGGA GAAAAAGAAA GCCTGCAGGT CGCCAACAGC CCAATCCCCT 000400
000401 ACCCCATCTG TGGAGGCGGA CTCCCCAGAC CAGAAGAAAA TCATTAGCCT ATGGTCAAAA TCCAGTTTTG ATGGTGCCTC 000480
000481 TTTAGCAAGT GATAAGAACG ACTGTAAAAC AGAAAGCAAA AATGACCCTA AGACTGAAAG AAAAAAGTCT TCATCTTCCA 000560
000561 GCCAGTACAA GGCCAATATG CACTTTCACA AGTTGTTTCT TAGTGTCCCA ACGGAGGAAC CACTGAAGCA AA
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Predicted Small Protein

Name NONHSAT103576_smProtein_347:484
Length 46
Molecular weight 5416.395
Aromaticity 0.0666666666667
Instability index 89.8688888889
Isoelectric point 12.4808959961
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0439851616322
Amino acid sequence MVWRRKRKPAGRQQPNPLPHLWRRTPQTRRKSLAYGQNPVLMVPL
Secondary structure LLLEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLEEEELL
PRMN -
PiMo -