Difference between revisions of "NONHSAT103576"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ACCAATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTACCTCTCTCTGAATGTCTAAAGTGAAGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAA</dnaseq>| | sequence = <dnaseq>ACCAATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTACCTCTCTCTGAATGTCTAAAGTGAAGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAA</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG041439]][[Category:Transcripts]] |
Latest revision as of 01:28, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103576 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
632 nt |
Genomic location |
chr5+:125759098..125807996 |
Exon number |
4 |
Exons |
125759098..125759381,125801069..125801237,125805369..125805480,125807930..125807996 |
Genome context |
|
Sequence |
000001 ACCAATCGCG CCCGCTCCGA CGTGTCCAGG TCCGCGGCCC CGGGAGCTTG GCGCGGCCCG GCCTGGATGC GCTGGGCGGA 000080
000081 GGGTGCAGGG GAGGGCACGG CGCCGCTTGC TTGGCCTGCG CACCCGGACC TAGAAGCCGG GACGAGCCGG GGCAGAGCCA 000160 000161 GGCGCGCGGA AGTCTGAAGG TGCCCTCCAG ACACGGCCCC GATGACTGAA CTACAGCAAG ATGTGGAAGA CACAAAGCCT 000240 000241 GCGAAAGTGC TCGGGAAGAG GGAGAGCAAA CTTGGCTCAG CCCACTACCT CTCTCTGAAT GTCTAAAGTG AAGCGGTTTC 000320 000321 CTTTCTTCTT CAGCTCAGAG GCTGAGAATG GTGTGGAGGA GAAAAAGAAA GCCTGCAGGT CGCCAACAGC CCAATCCCCT 000400 000401 ACCCCATCTG TGGAGGCGGA CTCCCCAGAC CAGAAGAAAA TCATTAGCCT ATGGTCAAAA TCCAGTTTTG ATGGTGCCTC 000480 000481 TTTAGCAAGT GATAAGAACG ACTGTAAAAC AGAAAGCAAA AATGACCCTA AGACTGAAAG AAAAAAGTCT TCATCTTCCA 000560 000561 GCCAGTACAA GGCCAATATG CACTTTCACA AGTTGTTTCT TAGTGTCCCA ACGGAGGAAC CACTGAAGCA AA |
Predicted Small Protein
Name | NONHSAT103576_smProtein_347:484 |
Length | 46 |
Molecular weight | 5416.395 |
Aromaticity | 0.0666666666667 |
Instability index | 89.8688888889 |
Isoelectric point | 12.4808959961 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0439851616322 |
Amino acid sequence | MVWRRKRKPAGRQQPNPLPHLWRRTPQTRRKSLAYGQNPVLMVPL |
Secondary structure | LLLEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLEEEELL |
PRMN | - |
PiMo | - |