Difference between revisions of "NONHSAT116619"

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sequence = <dnaseq>AGAACGACCGAGTTTCTCTCAGCCGAGAACTGTGGCTGCCCCTCCGGTGAAAACAGAGGAAGTGGGAGCGGCAGGAAGCGCTTTGGGACCAGGGCGACCCCTGAAGCGTAGAGGAACCAGGTCACAAGCATACGTGAATGCTCACATTCCATAGTTATCAAATGTATTCAGGTTTAAATTTTACTTTTCTAGAAAAAATGTAAATAATCCGTTGAGAATATTTAATGAAAAATGTTGGTCGTATCTTTATCTGGTCTGCGGCTCTGTCCCTGTTTCCTGGATAGGAGACTACGTCTGTATCTTGTATCACAGGAGGCACCTTCTTCCTGTTTCCTGGCACAGACTTtaaatcttagtgctcctcactctttgcgtctacgctgcttttatgaactgttaacactcactgtgaaggtctgcagcttcactccttaagccagcgagaccacaaacccactgggagggataaacaactccagacgggaggaacaaacaacttcgggtgcaccacctttatgaactgtagcactcactgcgaaggtctgcagcttcactcctgaggccagcaagaccacgaacccaccagaaggaacgaacaactccagatatgccacctttaagggctataacactcaccgcggaagtctgcagcttcactcctgaagtcagtgagaccatgaacccaccagaaggaagaaactctggacacatctgaacatctgaaggaacaaactctggacacaccatctttaagaactgtaacactcaccgcgagggtacacggcttcattcttgaagtcagcgagactaagaacccaacaattccggacacagcatgatcttggttcact</dnaseq>|
 
sequence = <dnaseq>AGAACGACCGAGTTTCTCTCAGCCGAGAACTGTGGCTGCCCCTCCGGTGAAAACAGAGGAAGTGGGAGCGGCAGGAAGCGCTTTGGGACCAGGGCGACCCCTGAAGCGTAGAGGAACCAGGTCACAAGCATACGTGAATGCTCACATTCCATAGTTATCAAATGTATTCAGGTTTAAATTTTACTTTTCTAGAAAAAATGTAAATAATCCGTTGAGAATATTTAATGAAAAATGTTGGTCGTATCTTTATCTGGTCTGCGGCTCTGTCCCTGTTTCCTGGATAGGAGACTACGTCTGTATCTTGTATCACAGGAGGCACCTTCTTCCTGTTTCCTGGCACAGACTTtaaatcttagtgctcctcactctttgcgtctacgctgcttttatgaactgttaacactcactgtgaaggtctgcagcttcactccttaagccagcgagaccacaaacccactgggagggataaacaactccagacgggaggaacaaacaacttcgggtgcaccacctttatgaactgtagcactcactgcgaaggtctgcagcttcactcctgaggccagcaagaccacgaacccaccagaaggaacgaacaactccagatatgccacctttaagggctataacactcaccgcggaagtctgcagcttcactcctgaagtcagtgagaccatgaacccaccagaaggaagaaactctggacacatctgaacatctgaaggaacaaactctggacacaccatctttaagaactgtaacactcaccgcgagggtacacggcttcattcttgaagtcagcgagactaagaacccaacaattccggacacagcatgatcttggttcact</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:NONHSAG045690]][[Category:Transcripts]]

Latest revision as of 02:09, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT116619

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

851 nt

Genomic location

chr6_cox_hap2+:1996095..1999049

Exon number

2

Exons

1996095..1996440,1998545..1999049

Genome context

Sequence
000001 AGAACGACCG AGTTTCTCTC AGCCGAGAAC TGTGGCTGCC CCTCCGGTGA AAACAGAGGA AGTGGGAGCG GCAGGAAGCG 000080
000081 CTTTGGGACC AGGGCGACCC CTGAAGCGTA GAGGAACCAG GTCACAAGCA TACGTGAATG CTCACATTCC ATAGTTATCA 000160
000161 AATGTATTCA GGTTTAAATT TTACTTTTCT AGAAAAAATG TAAATAATCC GTTGAGAATA TTTAATGAAA AATGTTGGTC 000240
000241 GTATCTTTAT CTGGTCTGCG GCTCTGTCCC TGTTTCCTGG ATAGGAGACT ACGTCTGTAT CTTGTATCAC AGGAGGCACC 000320
000321 TTCTTCCTGT TTCCTGGCAC AGACTTtaaa tcttagtgct cctcactctt tgcgtctacg ctgcttttat gaactgttaa 000400
000401 cactcactgt gaaggtctgc agcttcactc cttaagccag cgagaccaca aacccactgg gagggataaa caactccaga 000480
000481 cgggaggaac aaacaacttc gggtgcacca cctttatgaa ctgtagcact cactgcgaag gtctgcagct tcactcctga 000560
000561 ggccagcaag accacgaacc caccagaagg aacgaacaac tccagatatg ccacctttaa gggctataac actcaccgcg 000640
000641 gaagtctgca gcttcactcc tgaagtcagt gagaccatga acccaccaga aggaagaaac tctggacaca tctgaacatc 000720
000721 tgaaggaaca aactctggac acaccatctt taagaactgt aacactcacc gcgagggtac acggcttcat tcttgaagtc 000800
000801 agcgagacta agaacccaac aattccggac acagcatgat cttggttcac t
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Predicted Small Protein

Name NONHSAT116619_smProtein_137:202
Length 22
Molecular weight 2589.015
Aromaticity 0.238095238095
Instability index 40.919047619
Isoelectric point 6.50079345703
Runs 6
Runs residual 0.0394557823129
Runs probability 0.0183124300771
Amino acid sequence MLTFHSYQMYSGLNFTFLEKM
Secondary structure LLLEEHHHHHHLLLHHHHHHL
PRMN -
PiMo -