Difference between revisions of "NONHSAT122605"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GGCAATGGAAATGACAAAAAAGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAAGAATAAGAAAATTCTTAAATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAGTTTGAAGCAAATGGGTATTTCTTTAAAAGGTATATTCATTTATTTTCCCATGTTCATTTTCTGTAGGTAAATATTGAACTTTTGGCTGTTTTACCTAGATGTTGTGATTATATGTACTTTTTTTCCTACATGATCATTTCAGTATTTAAAGCTGTAGTGTGGTTGAACAGTGACTGATGATAATTTTTGAACTACGATAAACTAAAACAACATAAAAAAATGCAAAGATATATTCCGGTCTCTTGCTCATGTCTGTCTTGCTGAAAATCCTAAAACAATCTACTTCAAAGATTAACCAACAGCAATATAGGTTGGATATAGAAGGATATCAGTCAGGAATTCTGATTGATTGAGATTACAAGGAACCCTTTCCATCTGGGACTCATGATAATTCCTCATAACGT</dnaseq>| | sequence = <dnaseq>GGCAATGGAAATGACAAAAAAGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAAGAATAAGAAAATTCTTAAATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAGTTTGAAGCAAATGGGTATTTCTTTAAAAGGTATATTCATTTATTTTCCCATGTTCATTTTCTGTAGGTAAATATTGAACTTTTGGCTGTTTTACCTAGATGTTGTGATTATATGTACTTTTTTTCCTACATGATCATTTCAGTATTTAAAGCTGTAGTGTGGTTGAACAGTGACTGATGATAATTTTTGAACTACGATAAACTAAAACAACATAAAAAAATGCAAAGATATATTCCGGTCTCTTGCTCATGTCTGTCTTGCTGAAAATCCTAAAACAATCTACTTCAAAGATTAACCAACAGCAATATAGGTTGGATATAGAAGGATATCAGTCAGGAATTCTGATTGATTGAGATTACAAGGAACCCTTTCCATCTGGGACTCATGATAATTCCTCATAACGT</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG048470]][[Category:Transcripts]] |
Latest revision as of 06:42, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT122605 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
584 nt |
| Genomic location |
chr7+:104717563..104718255 |
| Exon number |
2 |
| Exons |
104717563..104717640,104717750..104718255 |
| Genome context |
|
| Sequence |
000001 GGCAATGGAA ATGACAAAAA AGAGATGAAT AAATCCGATT TGAATACCAA CAATTTGCTC TTCAAACCTC CTGTAGAGAG 000080
000081 CCATATACAA AAGAATAAGA AAATTCTTAA ATCTGCAAAA GATTTGCCTC CTGATGCACT TATCATTGAA TACAGAGGGA 000160 000161 AGTTTATGCT GAGAGAACAG TTTGAAGCAA ATGGGTATTT CTTTAAAAGG TATATTCATT TATTTTCCCA TGTTCATTTT 000240 000241 CTGTAGGTAA ATATTGAACT TTTGGCTGTT TTACCTAGAT GTTGTGATTA TATGTACTTT TTTTCCTACA TGATCATTTC 000320 000321 AGTATTTAAA GCTGTAGTGT GGTTGAACAG TGACTGATGA TAATTTTTGA ACTACGATAA ACTAAAACAA CATAAAAAAA 000400 000401 TGCAAAGATA TATTCCGGTC TCTTGCTCAT GTCTGTCTTG CTGAAAATCC TAAAACAATC TACTTCAAAG ATTAACCAAC 000480 000481 AGCAATATAG GTTGGATATA GAAGGATATC AGTCAGGAAT TCTGATTGAT TGAGATTACA AGGAACCCTT TCCATCTGGG 000560 000561 ACTCATGATA ATTCCTCATA ACGT |
Predicted Small Protein
| Name | NONHSAT122605_smProtein_428:532 |
| Length | 35 |
| Molecular weight | 3924.5204 |
| Aromaticity | 0.0588235294118 |
| Instability index | 66.6205882353 |
| Isoelectric point | 8.13983154297 |
| Runs | 5 |
| Runs residual | 0.0390915860015 |
| Runs probability | 0.0231937820174 |
| Amino acid sequence | MSVLLKILKQSTSKINQQQYRLDIEGYQSGILID |
| Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEL |
| PRMN | - |
| PiMo | - |
