Difference between revisions of "NONHSAT125182"

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sequence = <dnaseq>TGGTGGACCCTGCTGACTTGCTCACTACTGGCAAGCAAAGTGTTCACTGATGAATGAACAATTACATTTACCCACAGACTGAAATATGATGTTATTTTGTTTTGACTGAAATTCCAACTCACTGTGAGAATACTGTGAAAAAAATCATGAGAAGTATCCTCATAGGTGAGTCTTTTCACACATCTGCACTAGTGAATATCTGAATTTTAAAAGCCACTCCAGACCTACATAGGTGATGAACGATGTGTACTTGAAAACAGTACACTCTTGCACAGCTGTCCCTGGAGCTTCCCCGTGGAGCTGTTAAACTTGCCCTCCGCTGGCTGTTTTCCACAAAGTAATATGGTTACATAGATTCACGGCTCATGGCAATGTTTCATTAAGACAGTTCTTGATGGCCGCTCCACACCTTTCTCACCACATCTCACAGGCTGCCCTGCTGAGCCAGGTCTCCCTGGAACCCGGGGCTCCTGCGCAGGCCCCCATTTTGCTCCAGAACACCCAGGAAGGCGGGGCTTGGGCTGGAATGGGGACACCGATTACCCTCTGTTCAGGCCTTTGGTGCCAGCTGAGGTCGATACTGGTGCCAGGATCGAGACTGTGCGCATCCCATCGAGAGCGGGCAGATGTGGGGGCGCACTGGACCGGGCCTCCCAGGCTGACACCCATTCACAGCAGCCTGAGCCTAATCCGCCACTGCTCGCCTTCCTCCGACGTCTCCACCTAAACCATCCTTCTGCACATTGTGACCCATCACTCCGCCCTTTGTCC</dnaseq>|
 
sequence = <dnaseq>TGGTGGACCCTGCTGACTTGCTCACTACTGGCAAGCAAAGTGTTCACTGATGAATGAACAATTACATTTACCCACAGACTGAAATATGATGTTATTTTGTTTTGACTGAAATTCCAACTCACTGTGAGAATACTGTGAAAAAAATCATGAGAAGTATCCTCATAGGTGAGTCTTTTCACACATCTGCACTAGTGAATATCTGAATTTTAAAAGCCACTCCAGACCTACATAGGTGATGAACGATGTGTACTTGAAAACAGTACACTCTTGCACAGCTGTCCCTGGAGCTTCCCCGTGGAGCTGTTAAACTTGCCCTCCGCTGGCTGTTTTCCACAAAGTAATATGGTTACATAGATTCACGGCTCATGGCAATGTTTCATTAAGACAGTTCTTGATGGCCGCTCCACACCTTTCTCACCACATCTCACAGGCTGCCCTGCTGAGCCAGGTCTCCCTGGAACCCGGGGCTCCTGCGCAGGCCCCCATTTTGCTCCAGAACACCCAGGAAGGCGGGGCTTGGGCTGGAATGGGGACACCGATTACCCTCTGTTCAGGCCTTTGGTGCCAGCTGAGGTCGATACTGGTGCCAGGATCGAGACTGTGCGCATCCCATCGAGAGCGGGCAGATGTGGGGGCGCACTGGACCGGGCCTCCCAGGCTGACACCCATTCACAGCAGCCTGAGCCTAATCCGCCACTGCTCGCCTTCCTCCGACGTCTCCACCTAAACCATCCTTCTGCACATTGTGACCCATCACTCCGCCCTTTGTCC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG049587]][[Category:Transcripts]]

Latest revision as of 06:53, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT125182

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

771 nt

Genomic location

chr8-:12623571..12668910

Exon number

4

Exons

12623571..12624104,12635763..12635865,12645841..12645953,12668889..12668910

Genome context

Sequence
000001 TGGTGGACCC TGCTGACTTG CTCACTACTG GCAAGCAAAG TGTTCACTGA TGAATGAACA ATTACATTTA CCCACAGACT 000080
000081 GAAATATGAT GTTATTTTGT TTTGACTGAA ATTCCAACTC ACTGTGAGAA TACTGTGAAA AAAATCATGA GAAGTATCCT 000160
000161 CATAGGTGAG TCTTTTCACA CATCTGCACT AGTGAATATC TGAATTTTAA AAGCCACTCC AGACCTACAT AGGTGATGAA 000240
000241 CGATGTGTAC TTGAAAACAG TACACTCTTG CACAGCTGTC CCTGGAGCTT CCCCGTGGAG CTGTTAAACT TGCCCTCCGC 000320
000321 TGGCTGTTTT CCACAAAGTA ATATGGTTAC ATAGATTCAC GGCTCATGGC AATGTTTCAT TAAGACAGTT CTTGATGGCC 000400
000401 GCTCCACACC TTTCTCACCA CATCTCACAG GCTGCCCTGC TGAGCCAGGT CTCCCTGGAA CCCGGGGCTC CTGCGCAGGC 000480
000481 CCCCATTTTG CTCCAGAACA CCCAGGAAGG CGGGGCTTGG GCTGGAATGG GGACACCGAT TACCCTCTGT TCAGGCCTTT 000560
000561 GGTGCCAGCT GAGGTCGATA CTGGTGCCAG GATCGAGACT GTGCGCATCC CATCGAGAGC GGGCAGATGT GGGGGCGCAC 000640
000641 TGGACCGGGC CTCCCAGGCT GACACCCATT CACAGCAGCC TGAGCCTAAT CCGCCACTGC TCGCCTTCCT CCGACGTCTC 000720
000721 CACCTAAACC ATCCTTCTGC ACATTGTGAC CCATCACTCC GCCCTTTGTC C
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Predicted Small Protein

Name NONHSAT125182_smProtein_146:202
Length 19
Molecular weight 1988.3107
Aromaticity 0.0555555555556
Instability index 67.1
Isoelectric point 6.50189208984
Runs 5
Runs residual 0.0116959064327
Runs probability 0.0144497438615
Amino acid sequence MRSILIGESFHTSALVNI
Secondary structure LLEEEELLLLLLHHHLLL
PRMN -
PiMo -