Difference between revisions of "NONHSAT125182"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TGGTGGACCCTGCTGACTTGCTCACTACTGGCAAGCAAAGTGTTCACTGATGAATGAACAATTACATTTACCCACAGACTGAAATATGATGTTATTTTGTTTTGACTGAAATTCCAACTCACTGTGAGAATACTGTGAAAAAAATCATGAGAAGTATCCTCATAGGTGAGTCTTTTCACACATCTGCACTAGTGAATATCTGAATTTTAAAAGCCACTCCAGACCTACATAGGTGATGAACGATGTGTACTTGAAAACAGTACACTCTTGCACAGCTGTCCCTGGAGCTTCCCCGTGGAGCTGTTAAACTTGCCCTCCGCTGGCTGTTTTCCACAAAGTAATATGGTTACATAGATTCACGGCTCATGGCAATGTTTCATTAAGACAGTTCTTGATGGCCGCTCCACACCTTTCTCACCACATCTCACAGGCTGCCCTGCTGAGCCAGGTCTCCCTGGAACCCGGGGCTCCTGCGCAGGCCCCCATTTTGCTCCAGAACACCCAGGAAGGCGGGGCTTGGGCTGGAATGGGGACACCGATTACCCTCTGTTCAGGCCTTTGGTGCCAGCTGAGGTCGATACTGGTGCCAGGATCGAGACTGTGCGCATCCCATCGAGAGCGGGCAGATGTGGGGGCGCACTGGACCGGGCCTCCCAGGCTGACACCCATTCACAGCAGCCTGAGCCTAATCCGCCACTGCTCGCCTTCCTCCGACGTCTCCACCTAAACCATCCTTCTGCACATTGTGACCCATCACTCCGCCCTTTGTCC</dnaseq>| | sequence = <dnaseq>TGGTGGACCCTGCTGACTTGCTCACTACTGGCAAGCAAAGTGTTCACTGATGAATGAACAATTACATTTACCCACAGACTGAAATATGATGTTATTTTGTTTTGACTGAAATTCCAACTCACTGTGAGAATACTGTGAAAAAAATCATGAGAAGTATCCTCATAGGTGAGTCTTTTCACACATCTGCACTAGTGAATATCTGAATTTTAAAAGCCACTCCAGACCTACATAGGTGATGAACGATGTGTACTTGAAAACAGTACACTCTTGCACAGCTGTCCCTGGAGCTTCCCCGTGGAGCTGTTAAACTTGCCCTCCGCTGGCTGTTTTCCACAAAGTAATATGGTTACATAGATTCACGGCTCATGGCAATGTTTCATTAAGACAGTTCTTGATGGCCGCTCCACACCTTTCTCACCACATCTCACAGGCTGCCCTGCTGAGCCAGGTCTCCCTGGAACCCGGGGCTCCTGCGCAGGCCCCCATTTTGCTCCAGAACACCCAGGAAGGCGGGGCTTGGGCTGGAATGGGGACACCGATTACCCTCTGTTCAGGCCTTTGGTGCCAGCTGAGGTCGATACTGGTGCCAGGATCGAGACTGTGCGCATCCCATCGAGAGCGGGCAGATGTGGGGGCGCACTGGACCGGGCCTCCCAGGCTGACACCCATTCACAGCAGCCTGAGCCTAATCCGCCACTGCTCGCCTTCCTCCGACGTCTCCACCTAAACCATCCTTCTGCACATTGTGACCCATCACTCCGCCCTTTGTCC</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG049587]][[Category:Transcripts]] |
Latest revision as of 06:53, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125182 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
771 nt |
Genomic location |
chr8-:12623571..12668910 |
Exon number |
4 |
Exons |
12623571..12624104,12635763..12635865,12645841..12645953,12668889..12668910 |
Genome context |
|
Sequence |
000001 TGGTGGACCC TGCTGACTTG CTCACTACTG GCAAGCAAAG TGTTCACTGA TGAATGAACA ATTACATTTA CCCACAGACT 000080
000081 GAAATATGAT GTTATTTTGT TTTGACTGAA ATTCCAACTC ACTGTGAGAA TACTGTGAAA AAAATCATGA GAAGTATCCT 000160 000161 CATAGGTGAG TCTTTTCACA CATCTGCACT AGTGAATATC TGAATTTTAA AAGCCACTCC AGACCTACAT AGGTGATGAA 000240 000241 CGATGTGTAC TTGAAAACAG TACACTCTTG CACAGCTGTC CCTGGAGCTT CCCCGTGGAG CTGTTAAACT TGCCCTCCGC 000320 000321 TGGCTGTTTT CCACAAAGTA ATATGGTTAC ATAGATTCAC GGCTCATGGC AATGTTTCAT TAAGACAGTT CTTGATGGCC 000400 000401 GCTCCACACC TTTCTCACCA CATCTCACAG GCTGCCCTGC TGAGCCAGGT CTCCCTGGAA CCCGGGGCTC CTGCGCAGGC 000480 000481 CCCCATTTTG CTCCAGAACA CCCAGGAAGG CGGGGCTTGG GCTGGAATGG GGACACCGAT TACCCTCTGT TCAGGCCTTT 000560 000561 GGTGCCAGCT GAGGTCGATA CTGGTGCCAG GATCGAGACT GTGCGCATCC CATCGAGAGC GGGCAGATGT GGGGGCGCAC 000640 000641 TGGACCGGGC CTCCCAGGCT GACACCCATT CACAGCAGCC TGAGCCTAAT CCGCCACTGC TCGCCTTCCT CCGACGTCTC 000720 000721 CACCTAAACC ATCCTTCTGC ACATTGTGAC CCATCACTCC GCCCTTTGTC C |
Predicted Small Protein
Name | NONHSAT125182_smProtein_146:202 |
Length | 19 |
Molecular weight | 1988.3107 |
Aromaticity | 0.0555555555556 |
Instability index | 67.1 |
Isoelectric point | 6.50189208984 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0144497438615 |
Amino acid sequence | MRSILIGESFHTSALVNI |
Secondary structure | LLEEEELLLLLLHHHLLL |
PRMN | - |
PiMo | - |