Difference between revisions of "NONHSAT127927"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GgggtatggaaaacaggctcttaagtataatgtttattgttatgaaagtgtaacttggtactcaatctccatagatgccagtacagcaatatctatttaaaataaaaatccatatattctttgatccaacagttgcacttctaggaatttattctacagaaatatttaaccatgtgtgaaataacatgtgtaaaaatattcgtagaacattgaaattgtaaaagattggaaagatcctaaatgtctgtcaacaagttggaaacaatttaaagtacaAGAAAAAGAGTTACTGGAAAAATACACCTATGTACACACAACATATATACATATCTTAATGCTTATAATGAAGTATCTCTGGAAAAATAAGCAAGAAACTGGCCTCCAGAAAAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGCTATGGAGATCAAAGCTAAAAGACATGAGGAACAGCAACGAGAATTGGAAGAGGAAGAAGAA</dnaseq>| | sequence = <dnaseq>GgggtatggaaaacaggctcttaagtataatgtttattgttatgaaagtgtaacttggtactcaatctccatagatgccagtacagcaatatctatttaaaataaaaatccatatattctttgatccaacagttgcacttctaggaatttattctacagaaatatttaaccatgtgtgaaataacatgtgtaaaaatattcgtagaacattgaaattgtaaaagattggaaagatcctaaatgtctgtcaacaagttggaaacaatttaaagtacaAGAAAAAGAGTTACTGGAAAAATACACCTATGTACACACAACATATATACATATCTTAATGCTTATAATGAAGTATCTCTGGAAAAATAAGCAAGAAACTGGCCTCCAGAAAAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGCTATGGAGATCAAAGCTAAAAGACATGAGGAACAGCAACGAGAATTGGAAGAGGAAGAAGAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG050856]][[Category:Transcripts]] |
Latest revision as of 07:04, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT127927 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
510 nt |
| Genomic location |
chr8-:99591898..99607478 |
| Exon number |
2 |
| Exons |
99591898..99592017,99607089..99607478 |
| Genome context |
|
| Sequence |
000001 Ggggtatgga aaacaggctc ttaagtataa tgtttattgt tatgaaagtg taacttggta ctcaatctcc atagatgcca 000080
000081 gtacagcaat atctatttaa aataaaaatc catatattct ttgatccaac agttgcactt ctaggaattt attctacaga 000160 000161 aatatttaac catgtgtgaa ataacatgtg taaaaatatt cgtagaacat tgaaattgta aaagattgga aagatcctaa 000240 000241 atgtctgtca acaagttgga aacaatttaa agtacaAGAA AAAGAGTTAC TGGAAAAATA CACCTATGTA CACACAACAT 000320 000321 ATATACATAT CTTAATGCTT ATAATGAAGT ATCTCTGGAA AAATAAGCAA GAAACTGGCC TCCAGAAAAG CATCCTTTTA 000400 000401 TCAAGAATGC CAAACCTGTA TCAATATTAA GAGACCTGAT CACAGAAGCT ATGGAGATCA AAGCTAAAAG ACATGAGGAA 000480 000481 CAGCAACGAG AATTGGAAGA GGAAGAAGAA |
Predicted Small Protein
| Name | NONHSAT127927_smProtein_74:178 |
| Length | 35 |
| Molecular weight | 4023.737 |
| Aromaticity | 0.176470588235 |
| Instability index | 48.8441176471 |
| Isoelectric point | 6.69378662109 |
| Runs | 9 |
| Runs residual | 0.078555472822 |
| Runs probability | 0.0511884433454 |
| Amino acid sequence | MPVQQYLFKIKIHIFFDPTVALLGIYSTEIFNHV |
| Secondary structure | LLHHHHHHHLLEEEEELLLHHHHHLHHHHHHLLL |
| PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
| PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo |
