Difference between revisions of "NONHSAT129336"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>gatttgggagccaaaggaaggagctcttcacccagtgtagggtatggtttgtgaaggtatccctagagaaggtgactctgcggctgagcttgaaggaagagaattggtaggtgacaaagaagagGTAATGAGCCAAAAAGATCATGTCTGAAATACAAGGAACGGTTGAGTTTTCGGTAGAGCTACATAAATTTTATAATGTGGATCTCTTTCAGAGAGGAATCTATTAAATGTCCATGAGGTGATATTTGTAAAGCACCTAGTAAAATAGAGGCCCAGGTTTTACAGTACAAGCCAAGAGGACCCAAGCCCTCTATGGACTACTCCATTGATTGTAATTGAGACTCTGAACCAAACATCCTCAGCTGGTCAGTGCCAGGGCTAGAACAGACTGTCGATCTGGTCAAGCTCTGAATGTATGTTCCTCTCTACATTTTATGCAGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT</dnaseq>| | sequence = <dnaseq>gatttgggagccaaaggaaggagctcttcacccagtgtagggtatggtttgtgaaggtatccctagagaaggtgactctgcggctgagcttgaaggaagagaattggtaggtgacaaagaagagGTAATGAGCCAAAAAGATCATGTCTGAAATACAAGGAACGGTTGAGTTTTCGGTAGAGCTACATAAATTTTATAATGTGGATCTCTTTCAGAGAGGAATCTATTAAATGTCCATGAGGTGATATTTGTAAAGCACCTAGTAAAATAGAGGCCCAGGTTTTACAGTACAAGCCAAGAGGACCCAAGCCCTCTATGGACTACTCCATTGATTGTAATTGAGACTCTGAACCAAACATCCTCAGCTGGTCAGTGCCAGGGCTAGAACAGACTGTCGATCTGGTCAAGCTCTGAATGTATGTTCCTCTCTACATTTTATGCAGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG051381]][[Category:Transcripts]] |
Latest revision as of 07:09, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT129336 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
547 nt |
| Genomic location |
chr8-:139278062..139489683 |
| Exon number |
5 |
| Exons |
139278062..139278085,139323084..139323163,139370581..139370803,139380150..139380245,139489560..139489683 |
| Genome context |
|
| Sequence |
000001 gatttgggag ccaaaggaag gagctcttca cccagtgtag ggtatggttt gtgaaggtat ccctagagaa ggtgactctg 000080
000081 cggctgagct tgaaggaaga gaattggtag gtgacaaaga agagGTAATG AGCCAAAAAG ATCATGTCTG AAATACAAGG 000160 000161 AACGGTTGAG TTTTCGGTAG AGCTACATAA ATTTTATAAT GTGGATCTCT TTCAGAGAGG AATCTATTAA ATGTCCATGA 000240 000241 GGTGATATTT GTAAAGCACC TAGTAAAATA GAGGCCCAGG TTTTACAGTA CAAGCCAAGA GGACCCAAGC CCTCTATGGA 000320 000321 CTACTCCATT GATTGTAATT GAGACTCTGA ACCAAACATC CTCAGCTGGT CAGTGCCAGG GCTAGAACAG ACTGTCGATC 000400 000401 TGGTCAAGCT CTGAATGTAT GTTCCTCTCT ACATTTTATG CAGGTATTAC CAGATCCGAG TGACCTTGAA GGTGTCTTCA 000480 000481 AGGATCCCCC ACAGACTGAG TGCCTCCATC GCTGGGCAGA CAGAGAGCAG CAGCCTGCAT TCAGCCT |
Predicted Small Protein
| Name | NONHSAT129336_smProtein_143:229 |
| Length | 29 |
| Molecular weight | 3350.7513 |
| Aromaticity | 0.178571428571 |
| Instability index | 44.7289285714 |
| Isoelectric point | 4.83099365234 |
| Runs | 6 |
| Runs residual | 0.0110663983903 |
| Runs probability | 0.0387740681859 |
| Amino acid sequence | MSEIQGTVEFSVELHKFYNVDLFQRGIY |
| Secondary structure | LLLLEEEEEEEEHHHHEEEHHHHHLLLL |
| PRMN | - |
| PiMo | - |
