Difference between revisions of "NONHSAT131515"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ACACAAATTCTGCAATGGCCCCAGAACACAAGGAATGTCAAATAGGATGATATAGTCGCTTTGCTAGGCATCCATACTGTGGAAAAGCTGGAGCAAACTCTGGAGTTATGTTGACAACATGACTTGAATGAAAAGGAAGTATTTCAAAAATAATATGACAACTGTGTGACTACAATGAGAAGATATACTTATGACATGGCTTAAAATATACAAGTTAAACATTACATGGGCGATCAAGATTTGTTGGATATCCTGTTTTTTCATAATCCAGAAAGCCTTTTTGTCTTTCCGTGTCAATGGAAGTGTCGTCCAGATCATTGTCTATATGGAAGCAGTTGCCAAGAAGCAGGAGAAGGAATCTTTATTTTTCACGGGAACAGAGGTGTTTACCATGATGATAAGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTAAGATGACAATGTTTATTCATTAATAAAACCTTTAGAATTGGAACTACAAAAAACAGTGCATACATACCGTGGAAAAATTTACTAAATATTTATCAAACAATTAGCAAAAACATAAGAGATCGCTATGTCAGATCACCAAAGGAAAGGTGA</dnaseq>| | sequence = <dnaseq>ACACAAATTCTGCAATGGCCCCAGAACACAAGGAATGTCAAATAGGATGATATAGTCGCTTTGCTAGGCATCCATACTGTGGAAAAGCTGGAGCAAACTCTGGAGTTATGTTGACAACATGACTTGAATGAAAAGGAAGTATTTCAAAAATAATATGACAACTGTGTGACTACAATGAGAAGATATACTTATGACATGGCTTAAAATATACAAGTTAAACATTACATGGGCGATCAAGATTTGTTGGATATCCTGTTTTTTCATAATCCAGAAAGCCTTTTTGTCTTTCCGTGTCAATGGAAGTGTCGTCCAGATCATTGTCTATATGGAAGCAGTTGCCAAGAAGCAGGAGAAGGAATCTTTATTTTTCACGGGAACAGAGGTGTTTACCATGATGATAAGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTAAGATGACAATGTTTATTCATTAATAAAACCTTTAGAATTGGAACTACAAAAAACAGTGCATACATACCGTGGAAAAATTTACTAAATATTTATCAAACAATTAGCAAAAACATAAGAGATCGCTATGTCAGATCACCAAAGGAAAGGTGA</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG052404]][[Category:Transcripts]] |
Latest revision as of 07:18, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
601 nt |
Genomic location |
chr9-:66342521..66343121 |
Exon number |
1 |
Exons |
66342521..66343121 |
Genome context |
|
Sequence |
000001 ACACAAATTC TGCAATGGCC CCAGAACACA AGGAATGTCA AATAGGATGA TATAGTCGCT TTGCTAGGCA TCCATACTGT 000080
000081 GGAAAAGCTG GAGCAAACTC TGGAGTTATG TTGACAACAT GACTTGAATG AAAAGGAAGT ATTTCAAAAA TAATATGACA 000160 000161 ACTGTGTGAC TACAATGAGA AGATATACTT ATGACATGGC TTAAAATATA CAAGTTAAAC ATTACATGGG CGATCAAGAT 000240 000241 TTGTTGGATA TCCTGTTTTT TCATAATCCA GAAAGCCTTT TTGTCTTTCC GTGTCAATGG AAGTGTCGTC CAGATCATTG 000320 000321 TCTATATGGA AGCAGTTGCC AAGAAGCAGG AGAAGGAATC TTTATTTTTC ACGGGAACAG AGGTGTTTAC CATGATGATA 000400 000401 AGCAACCAGC ATTTAGAGCT GTTTATGAAG CACTGAGAAA TTGTTCTTTT AAGATGACAA TGTTTATTCA TTAATAAAAC 000480 000481 CTTTAGAATT GGAACTACAA AAAACAGTGC ATACATACCG TGGAAAAATT TACTAAATAT TTATCAAACA ATTAGCAAAA 000560 000561 ACATAAGAGA TCGCTATGTC AGATCACCAA AGGAAAGGTG A |
Predicted Small Protein
Name | NONHSAT131515_smProtein_296:394 |
Length | 33 |
Molecular weight | 3980.5855 |
Aromaticity | 0.09375 |
Instability index | 129.9875 |
Isoelectric point | 11.6170043945 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0199989905872 |
Amino acid sequence | MEVSSRSLSIWKQLPRSRRRNLYFSREQRCLP |
Secondary structure | LEELLLLHHHHHHLLLHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |