Difference between revisions of "NONHSAT133123"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AAAAGCCTATAATCAGTATAAGCCTGACACAGACAGGTGCTCAGGAAACAATTTTTGAATGAATGACTAGATGCTGAATTATTTGCTTGGTAGGATGAGGATGGGCATTTCCAACATATTGCAACTGGAAACAGTGTTCCACGTTTAGAACTCCTCTTCGCCTCATGAGCTAATTTGGCACATTACTGGTCTGAGTGAGCTGTGGGTTGTCTTCAGGACAACCCCAACCATCCAGGGAGGAACAGCTAATAAGAATGGCACCCTTGCTGGAAAGTGTATGGTTGCTGACTGGAAGAAATATCCATGACATGTTGTGATCCACCAGGAACAGAGGCCACGTAGGGAGAGACTCCAACTCCCACTGAGAGTGGAAGGCCCCTTCTCCCCAGGGGCAGAACAACCGTCAGGACCCCCGCTTGACTGTCTTTGGTGGCAAGCATGGCTGGAGTTGGCCACCCTGAGCTCATTATGTTGAGCACAGAGAAATTTACCACAGGGGAAAGAAAGCAATGCCAGAACCCTGGGCAGCCCAGGAAGAAGGCCACACTAAGCGTCTTGTGTTAAGGGTCCCTTCTCCCACAGATGAGCCATTTCTGGGCTAAAATCCATATAGTTTTGTCCTTTCCCTCCCTAAGCTGTGAAGGAAGTGGGAGCAGTAGACAAAGCTGGGCATCCACCCAGGGCTGGGCAGGTCTGGGGCAGA</dnaseq>| | sequence = <dnaseq>AAAAGCCTATAATCAGTATAAGCCTGACACAGACAGGTGCTCAGGAAACAATTTTTGAATGAATGACTAGATGCTGAATTATTTGCTTGGTAGGATGAGGATGGGCATTTCCAACATATTGCAACTGGAAACAGTGTTCCACGTTTAGAACTCCTCTTCGCCTCATGAGCTAATTTGGCACATTACTGGTCTGAGTGAGCTGTGGGTTGTCTTCAGGACAACCCCAACCATCCAGGGAGGAACAGCTAATAAGAATGGCACCCTTGCTGGAAAGTGTATGGTTGCTGACTGGAAGAAATATCCATGACATGTTGTGATCCACCAGGAACAGAGGCCACGTAGGGAGAGACTCCAACTCCCACTGAGAGTGGAAGGCCCCTTCTCCCCAGGGGCAGAACAACCGTCAGGACCCCCGCTTGACTGTCTTTGGTGGCAAGCATGGCTGGAGTTGGCCACCCTGAGCTCATTATGTTGAGCACAGAGAAATTTACCACAGGGGAAAGAAAGCAATGCCAGAACCCTGGGCAGCCCAGGAAGAAGGCCACACTAAGCGTCTTGTGTTAAGGGTCCCTTCTCCCACAGATGAGCCATTTCTGGGCTAAAATCCATATAGTTTTGTCCTTTCCCTCCCTAAGCTGTGAAGGAAGTGGGAGCAGTAGACAAAGCTGGGCATCCACCCAGGGCTGGGCAGGTCTGGGGCAGA</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 02:29, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133123 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
703 nt |
Genomic location |
chr9+:93943542..93950409 |
Exon number |
3 |
Exons |
93943542..93943753,93944102..93944207,93950025..93950409 |
Genome context |
|
Sequence |
000001 AAAAGCCTAT AATCAGTATA AGCCTGACAC AGACAGGTGC TCAGGAAACA ATTTTTGAAT GAATGACTAG ATGCTGAATT 000080
000081 ATTTGCTTGG TAGGATGAGG ATGGGCATTT CCAACATATT GCAACTGGAA ACAGTGTTCC ACGTTTAGAA CTCCTCTTCG 000160 000161 CCTCATGAGC TAATTTGGCA CATTACTGGT CTGAGTGAGC TGTGGGTTGT CTTCAGGACA ACCCCAACCA TCCAGGGAGG 000240 000241 AACAGCTAAT AAGAATGGCA CCCTTGCTGG AAAGTGTATG GTTGCTGACT GGAAGAAATA TCCATGACAT GTTGTGATCC 000320 000321 ACCAGGAACA GAGGCCACGT AGGGAGAGAC TCCAACTCCC ACTGAGAGTG GAAGGCCCCT TCTCCCCAGG GGCAGAACAA 000400 000401 CCGTCAGGAC CCCCGCTTGA CTGTCTTTGG TGGCAAGCAT GGCTGGAGTT GGCCACCCTG AGCTCATTAT GTTGAGCACA 000480 000481 GAGAAATTTA CCACAGGGGA AAGAAAGCAA TGCCAGAACC CTGGGCAGCC CAGGAAGAAG GCCACACTAA GCGTCTTGTG 000560 000561 TTAAGGGTCC CTTCTCCCAC AGATGAGCCA TTTCTGGGCT AAAATCCATA TAGTTTTGTC CTTTCCCTCC CTAAGCTGTG 000640 000641 AAGGAAGTGG GAGCAGTAGA CAAAGCTGGG CATCCACCCA GGGCTGGGCA GGTCTGGGGC AGA |
Predicted Small Protein
Name | NONHSAT133123_smProtein_509:601 |
Length | 31 |
Molecular weight | 3388.8049 |
Aromaticity | 0.0666666666667 |
Instability index | 102.943333333 |
Isoelectric point | 4.95770263672 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0409644939057 |
Amino acid sequence | MPEPWAAQEEGHTKRLVLRVPSPTDEPFLG |
Secondary structure | LLLLHHHHLLLLLLEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |