Difference between revisions of "NONHSAT134505"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ATGTGGTACCAGGCTTTCGCTCAGCGTGTGAAACAGAAGCCCTACAGTCTGGAGATTTATACTGCATGTTAAGGCTTGCTTGTCTAAAATCTTTTTCAAGACTGCACGTAACAGCCTTCATATCCCCCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGCTGAAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGGAGAAATGAAGGCAGAGGTCACCAAACTACATAAAAAATTGTTTGAACAAGAAAAGAAGTTGCAAAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGGTCGTAACCCACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAGGCTCCTGAGAAGAACTTTCAGCCAATAAAGCTTGTGCTTCCCCCACCG</dnaseq>| | sequence = <dnaseq>ATGTGGTACCAGGCTTTCGCTCAGCGTGTGAAACAGAAGCCCTACAGTCTGGAGATTTATACTGCATGTTAAGGCTTGCTTGTCTAAAATCTTTTTCAAGACTGCACGTAACAGCCTTCATATCCCCCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGCTGAAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGGAGAAATGAAGGCAGAGGTCACCAAACTACATAAAAAATTGTTTGAACAAGAAAAGAAGTTGCAAAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGGTCGTAACCCACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAGGCTCCTGAGAAGAACTTTCAGCCAATAAAGCTTGTGCTTCCCCCACCG</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG053332]][[Category:Transcripts]] |
Latest revision as of 02:33, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT134505 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
549 nt |
| Genomic location |
chr9-:123151474..123163297 |
| Exon number |
4 |
| Exons |
123151474..123151570,123152019..123152065,123156790..123156916,123163020..123163297 |
| Genome context |
|
| Sequence |
000001 ATGTGGTACC AGGCTTTCGC TCAGCGTGTG AAACAGAAGC CCTACAGTCT GGAGATTTAT ACTGCATGTT AAGGCTTGCT 000080
000081 TGTCTAAAAT CTTTTTCAAG ACTGCACGTA ACAGCCTTCA TATCCCCCGT GTAGGGTCCA CACCCAGCAC CACTGAGCAA 000160 000161 GTTTGTGAGC AGTGTGAGCA CGGCCAAGCT GACCCTGGAA GAGGCCTACA GGCGGCTGAA GCTTCTCTGG AGAGTCTCAC 000240 000241 TCCCCGAGGA TGGCCAGTGC CCCCTTCACT GTGAGCAGAT TGGAGAAATG AAGGCAGAGG TCACCAAACT ACATAAAAAA 000320 000321 TTGTTTGAAC AAGAAAAGAA GTTGCAAAAC ACCATGAAGC TTTTGCAGCT GAGCAAGCGC CAGGAAAAAG TCATCTTTGA 000400 000401 TCAATTGGTC GTAACCCACA AAATCCTTCG GAAGGCCAGA GGAAACCTGG AGCTTAGGCC TGGGGGAGCC CATCCAGGAA 000480 000481 CATGCAGTCC CAGCAGACCA GGCTCCTGAG AAGAACTTTC AGCCAATAAA GCTTGTGCTT CCCCCACCG |
Predicted Small Protein
| Name | NONHSAT134505_smProtein_287:508 |
| Length | 74 |
| Molecular weight | 8303.7391 |
| Aromaticity | 0.027397260274 |
| Instability index | 51.4931506849 |
| Isoelectric point | 10.4088745117 |
| Runs | 9 |
| Runs residual | 0.0208572691118 |
| Runs probability | 0.0226402873462 |
| Amino acid sequence | MKAEVTKLHKKLFEQEKKLQNTMKLLQLSKRQEKVIFDQLVVTHKILRKARGNLELRPGG AHPGTCSPSRPGS |
| Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHEEHHHHHHHHLLLLEELLLL LLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
