Difference between revisions of "NONHSAT137297"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GTCCCTGCCATTCTCATCATAGCAGTGTTAACATTAAATGAAAGAAAAATTTTAGGTCACATATAACTTTGTAAAGGTCCTAATATTGTAGGCCCATACAGACTACCCACAACCTTTTGCTGACACAATAAAACTATCCATTAAAGAGCAACTATGACCACTAACATCATCTATTCCCCTTTATATTATCACTCCATCCCTCACCTTCACCTTCATGCTCATATATGAATCCTTCTCCCTATACCCACCCCTTAATTAATATGATTATAGAAGTATTATTCATCTTAGCCACATCAAGCCTAGCTGTCTACTCAATCATATGATCAGGATGAGAATTCAATTCAAAATATGCATCAACTAGTGCATTGTGAGTCATAGCCCAAACAATTTCATAGGAAGTTACCCTGGCCATTATTCTCTTATCAGTACTTCTGATAAGTGGGTTATTCACCCTCTCAACTCTTGTCATCACACAAGAGTCTGTGTGATTACTTTTACCATCATGAGCCCTGGCCATGATATGATTTATTTAAACCCTAGCAGAAACCAATTGAGCCTCATTTGATTTAAAAGAAGGTGAGTCAGGGCCAGTCTCAAGCTTCAACATCAGATATGCTGCAGGGCCATTCACTCTATTCTTCACAGTAGATATTATTATAATATTAGTATAAGAGAATAAATGCCCTGGTGGTTATTATTTTTCTAGGAGCACGACATGACATCTTCACattaattgtaattatatacaattaatattatatacaattaatacaatacaattaatttCACCACCAAAACACTTCTACTAACACCCTTGTTTTTAAGAATTCAGGCATCATACCCACAATTCTTAGATGATCCACTTATACATCTCTTATGAAAGTATTTTCCACCCTTTACACTAGCCTTACACATATGACACATTTCAATGTCCATCTTAATATATAATATCCTGCAACAA</dnaseq>| | sequence = <dnaseq>GTCCCTGCCATTCTCATCATAGCAGTGTTAACATTAAATGAAAGAAAAATTTTAGGTCACATATAACTTTGTAAAGGTCCTAATATTGTAGGCCCATACAGACTACCCACAACCTTTTGCTGACACAATAAAACTATCCATTAAAGAGCAACTATGACCACTAACATCATCTATTCCCCTTTATATTATCACTCCATCCCTCACCTTCACCTTCATGCTCATATATGAATCCTTCTCCCTATACCCACCCCTTAATTAATATGATTATAGAAGTATTATTCATCTTAGCCACATCAAGCCTAGCTGTCTACTCAATCATATGATCAGGATGAGAATTCAATTCAAAATATGCATCAACTAGTGCATTGTGAGTCATAGCCCAAACAATTTCATAGGAAGTTACCCTGGCCATTATTCTCTTATCAGTACTTCTGATAAGTGGGTTATTCACCCTCTCAACTCTTGTCATCACACAAGAGTCTGTGTGATTACTTTTACCATCATGAGCCCTGGCCATGATATGATTTATTTAAACCCTAGCAGAAACCAATTGAGCCTCATTTGATTTAAAAGAAGGTGAGTCAGGGCCAGTCTCAAGCTTCAACATCAGATATGCTGCAGGGCCATTCACTCTATTCTTCACAGTAGATATTATTATAATATTAGTATAAGAGAATAAATGCCCTGGTGGTTATTATTTTTCTAGGAGCACGACATGACATCTTCACattaattgtaattatatacaattaatattatatacaattaatacaatacaattaatttCACCACCAAAACACTTCTACTAACACCCTTGTTTTTAAGAATTCAGGCATCATACCCACAATTCTTAGATGATCCACTTATACATCTCTTATGAAAGTATTTTCCACCCTTTACACTAGCCTTACACATATGACACATTTCAATGTCCATCTTAATATATAATATCCTGCAACAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG054631]][[Category:Transcripts]] |
Latest revision as of 02:44, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT137297 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
961 nt |
| Genomic location |
chrX+:62062012..62062972 |
| Exon number |
1 |
| Exons |
62062012..62062972 |
| Genome context |
|
| Sequence |
000001 GTCCCTGCCA TTCTCATCAT AGCAGTGTTA ACATTAAATG AAAGAAAAAT TTTAGGTCAC ATATAACTTT GTAAAGGTCC 000080
000081 TAATATTGTA GGCCCATACA GACTACCCAC AACCTTTTGC TGACACAATA AAACTATCCA TTAAAGAGCA ACTATGACCA 000160 000161 CTAACATCAT CTATTCCCCT TTATATTATC ACTCCATCCC TCACCTTCAC CTTCATGCTC ATATATGAAT CCTTCTCCCT 000240 000241 ATACCCACCC CTTAATTAAT ATGATTATAG AAGTATTATT CATCTTAGCC ACATCAAGCC TAGCTGTCTA CTCAATCATA 000320 000321 TGATCAGGAT GAGAATTCAA TTCAAAATAT GCATCAACTA GTGCATTGTG AGTCATAGCC CAAACAATTT CATAGGAAGT 000400 000401 TACCCTGGCC ATTATTCTCT TATCAGTACT TCTGATAAGT GGGTTATTCA CCCTCTCAAC TCTTGTCATC ACACAAGAGT 000480 000481 CTGTGTGATT ACTTTTACCA TCATGAGCCC TGGCCATGAT ATGATTTATT TAAACCCTAG CAGAAACCAA TTGAGCCTCA 000560 000561 TTTGATTTAA AAGAAGGTGA GTCAGGGCCA GTCTCAAGCT TCAACATCAG ATATGCTGCA GGGCCATTCA CTCTATTCTT 000640 000641 CACAGTAGAT ATTATTATAA TATTAGTATA AGAGAATAAA TGCCCTGGTG GTTATTATTT TTCTAGGAGC ACGACATGAC 000720 000721 ATCTTCACat taattgtaat tatatacaat taatattata tacaattaat acaatacaat taatttCACC ACCAAAACAC 000800 000801 TTCTACTAAC ACCCTTGTTT TTAAGAATTC AGGCATCATA CCCACAATTC TTAGATGATC CACTTATACA TCTCTTATGA 000880 000881 AAGTATTTTC CACCCTTTAC ACTAGCCTTA CACATATGAC ACATTTCAAT GTCCATCTTA ATATATAATA TCCTGCAACA 000960 000961 A |
Predicted Small Protein
| Name | NONHSAT137297_smProtein_224:322 |
| Length | 33 |
| Molecular weight | 3562.2424 |
| Aromaticity | 0.09375 |
| Instability index | 48.396875 |
| Isoelectric point | 5.22259521484 |
| Runs | 5 |
| Runs residual | 0.0353954081633 |
| Runs probability | 0.0307189542484 |
| Amino acid sequence | MNPSPYTHPLINMIIEVLFILATSSLAVYSII |
| Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHLLLLLLEEL |
| PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLL |
| PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTii |
