Difference between revisions of "NONHSAT139951"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| (One intermediate revision by one other user not shown) | |||
| Line 42: | Line 42: | ||
sequence = <dnaseq>AGAAGCCTCTGCTCCACCGCGGCGAGAGGCATGGGCACGTGGCTGCCGAGGGTGGCCGAGCTCTGGGAAGAAAAGCCCGTGTGCCTCTGCATAGCGTCGCTACAGCGCTGACTCGGTGTGGATTGATTGGAAAGGTTTGAGGGAGTACTTGGGAAGCATGGTGGCACATGATGAGACTGGAGGTCTCCTACCTATTAAAAGGACCATACGAGTCCTAGATGTCAATAACCAGTCCTTCAGAGAACAAGAGGAGCCAAGCAATAAAAGAGTTCGACCTCTGGCTCGTGTCACGTCCTTGGCAAATTTAATCTCTCCTGTAAGAAATGGAGCTGTCAGACGTTTTGGTCAAACAATACAGTCATTTACCCTTCGTGGTGACCACAGATCCCCAGCCTCTGCCCAGAAGTTTTCTAGCAGGTCAACAGTCCCAACACCCGCCAAGAGAAGGAGCAGTGCACTGTGGTCAGAGATGCTGGACATCACCATGAAGGAGTCTCTCACCACCAGGGAGATCAGACGGCAGGAGGAATGACCTCTGATGTTTGCTGGATGTTTTTAGGCAATATATGAAATGTCCCGAGGTGAACAGGATTTAATTG</dnaseq>| | sequence = <dnaseq>AGAAGCCTCTGCTCCACCGCGGCGAGAGGCATGGGCACGTGGCTGCCGAGGGTGGCCGAGCTCTGGGAAGAAAAGCCCGTGTGCCTCTGCATAGCGTCGCTACAGCGCTGACTCGGTGTGGATTGATTGGAAAGGTTTGAGGGAGTACTTGGGAAGCATGGTGGCACATGATGAGACTGGAGGTCTCCTACCTATTAAAAGGACCATACGAGTCCTAGATGTCAATAACCAGTCCTTCAGAGAACAAGAGGAGCCAAGCAATAAAAGAGTTCGACCTCTGGCTCGTGTCACGTCCTTGGCAAATTTAATCTCTCCTGTAAGAAATGGAGCTGTCAGACGTTTTGGTCAAACAATACAGTCATTTACCCTTCGTGGTGACCACAGATCCCCAGCCTCTGCCCAGAAGTTTTCTAGCAGGTCAACAGTCCCAACACCCGCCAAGAGAAGGAGCAGTGCACTGTGGTCAGAGATGCTGGACATCACCATGAAGGAGTCTCTCACCACCAGGGAGATCAGACGGCAGGAGGAATGACCTCTGATGTTTGCTGGATGTTTTTAGGCAATATATGAAATGTCCCGAGGTGAACAGGATTTAATTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG005096]][[Category:Transcripts]] |
Latest revision as of 02:57, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT139951 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
599 nt |
| Genomic location |
chr10+:5488572..5494860 |
| Exon number |
4 |
| Exons |
5488572..5488821,5493793..5493900,5494321..5494488,5494788..5494860 |
| Genome context |
|
| Sequence |
000001 AGAAGCCTCT GCTCCACCGC GGCGAGAGGC ATGGGCACGT GGCTGCCGAG GGTGGCCGAG CTCTGGGAAG AAAAGCCCGT 000080
000081 GTGCCTCTGC ATAGCGTCGC TACAGCGCTG ACTCGGTGTG GATTGATTGG AAAGGTTTGA GGGAGTACTT GGGAAGCATG 000160 000161 GTGGCACATG ATGAGACTGG AGGTCTCCTA CCTATTAAAA GGACCATACG AGTCCTAGAT GTCAATAACC AGTCCTTCAG 000240 000241 AGAACAAGAG GAGCCAAGCA ATAAAAGAGT TCGACCTCTG GCTCGTGTCA CGTCCTTGGC AAATTTAATC TCTCCTGTAA 000320 000321 GAAATGGAGC TGTCAGACGT TTTGGTCAAA CAATACAGTC ATTTACCCTT CGTGGTGACC ACAGATCCCC AGCCTCTGCC 000400 000401 CAGAAGTTTT CTAGCAGGTC AACAGTCCCA ACACCCGCCA AGAGAAGGAG CAGTGCACTG TGGTCAGAGA TGCTGGACAT 000480 000481 CACCATGAAG GAGTCTCTCA CCACCAGGGA GATCAGACGG CAGGAGGAAT GACCTCTGAT GTTTGCTGGA TGTTTTTAGG 000560 000561 CAATATATGA AATGTCCCGA GGTGAACAGG ATTTAATTG |
Predicted Small Protein
| Name | NONHSAT139951_smProtein_323:487 |
| Length | 55 |
| Molecular weight | 6057.8104 |
| Aromaticity | 0.0740740740741 |
| Instability index | 60.3388888889 |
| Isoelectric point | 6.80474853516 |
| Runs | 10 |
| Runs residual | 0.0224932249322 |
| Runs probability | 0.0185214626391 |
| Amino acid sequence | MELSDVLVKQYSHLPFVVTTDPQPLPRSFLAGQQSQHPPREGAVHCGQRCWTSP |
| Secondary structure | LLHHHHEEEELLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLEEELLLEEEELL |
| PRMN | - |
| PiMo | - |
