Difference between revisions of "Lnc-PPP3CC-1:2"
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sequence = <dnaseq>CAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTCATCCTGACCAATCTGGGTGACCAATCAATTAAATTGGTTTAGGAAGAGCTTGCCCTAGATTGGTTGATTTCATAATTTTTCTTTTTATTAATTATTGGGTTTTTCTCTCTGATCTCTGCATTGAAAATTATTTCCTAAGCCATAAAGACTTGTTGAGGTACCATTCTAGAATCCCCAATATTTATTCTAGTTGTTATAGTAACAGTGGAACCCAAGTTTCTCCTAAAGCATTACCCAGCTTTCCTTGCCCAGGCAGAAAAGATGGCAGAGGGAGGGTGAACCCAGGGCCCATCTGTGGGTATGGGCTCCAATTTCCTAAATTGTTTGTGGTTATAACCATGGCTTCCACCTTGTCTGGCACCGGGTCCACATCTTTTCTGAGACCTGCTAGAAGAGCTGACAGCCACTTGTTTGTTTCATCTTTCCTGAGAACTAAGAGAGGTTCACCCAGCTCAGTTCTTCTCAAAGACACCCCGTCTGTGCATTGTGCTTGTTTGCTCATCCATGAAAAGAGGAAGAGAGAACAGCCGTGGATGTGATGTCAGTATCAAAACTTCCTTGAGGACAGGCGGGATAAATTGGGCAAACGGCTGAGTTCTCCCGCAGCCTTTGGGAGATTGGCCCTGAGAACCCAGAATAGATGCCCATTATACATCATGCGTGTGCTATGGAAAGGTCTGTGCCAGGCAAGCCTGAGAGCCTAATTCGCTATTCCTATGGGGTTCCATGCACCCATCCTGGCTGTCAGGCCCCAATACCCATCATACTTGACCTGTACTGGGTATTTTTTCACTCAGATCCCTCACTCTACAGTGACTCTACCAGAAATCTTGAATTCCAGATGAGCCACGTCATGCCATTGTCAGCATAGGAGGCCCTTTGAAGCCCCAAAATGGGTCATTTGCACTCCCTTCTTCTGCCTGCTCCTGTTCCCATGAGTGGTTGGCATGGAAAGGGCCATCAGTAGAACTTGGCTGGCAACATTTGCAGGAGCAGGAATCAACAGAGGACCCAGGAGAAAGGGATGGAGCCCAGGGCATGAAACATAGTCCAGATTCCTGCTGGTCAGAGCCCTAGAGAATAAGAGAAGCTTGCTGCTGGTGAGGGGGTATGGCCAGGATTCCTGGAGTCGGAAGAGCTTCAGCTTCACCATCTTGGGAGAAGAAGGAAGAAAGTGAAAGCGATGTGGTCCTTCTTAGTCCCAAGGACCCTGACAGCTTTCACATGTGATGTTTCAAGGCAACGGGGAGAGCTTCTTTACCAGAACGAGGGAGAAGATAAGACTAAAGCAGTAATGGTGGTAGGGACTGAAAATCACTTAGTCTTTTCTCTACTCTCTTTCTTTCCAAACTTTGAGTTGAGTGGTGAGCTTGGAAAACACTCCAAAACTCCTCGTGGCCTCTGGCACCAGTCTGACACCCAGTAGGAATGCAGGAGATTACGTTAGTTTTCATAATTTAGCATTGATCACTCCCAGCTCGTAGCTAAAGTTGATCAGTAACTGTTGGTTGGTTGGCTGGTTTGGGGCTTGGGGATCCCTGAGCCAACTCAAGGGCCAGAAAGGATTCCAGAGTGTTTCCACGGTCCTTCAATGTTCCTTAAGCATTCCCACTTTCTGAAGTGCCATACAGAGGCTTGGGGCAGAGACAGGGAGAGGGGATGACCAGAATGGATGGGGAGCCGGAAGGGCCGGGGCTCTGGGGACCCAGCTCAGAGCAGCGAGAACAGCGGAAAAGCAGGCAGATCAAAACAAACACAGTGTCTGGGAACACCAAGACCCTCCTAATCCCATCCCCGCCAAAGGGACCCCACCCTTATCCTCTTTAGGGGCGCGGC</dnaseq>| | sequence = <dnaseq>CAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTCATCCTGACCAATCTGGGTGACCAATCAATTAAATTGGTTTAGGAAGAGCTTGCCCTAGATTGGTTGATTTCATAATTTTTCTTTTTATTAATTATTGGGTTTTTCTCTCTGATCTCTGCATTGAAAATTATTTCCTAAGCCATAAAGACTTGTTGAGGTACCATTCTAGAATCCCCAATATTTATTCTAGTTGTTATAGTAACAGTGGAACCCAAGTTTCTCCTAAAGCATTACCCAGCTTTCCTTGCCCAGGCAGAAAAGATGGCAGAGGGAGGGTGAACCCAGGGCCCATCTGTGGGTATGGGCTCCAATTTCCTAAATTGTTTGTGGTTATAACCATGGCTTCCACCTTGTCTGGCACCGGGTCCACATCTTTTCTGAGACCTGCTAGAAGAGCTGACAGCCACTTGTTTGTTTCATCTTTCCTGAGAACTAAGAGAGGTTCACCCAGCTCAGTTCTTCTCAAAGACACCCCGTCTGTGCATTGTGCTTGTTTGCTCATCCATGAAAAGAGGAAGAGAGAACAGCCGTGGATGTGATGTCAGTATCAAAACTTCCTTGAGGACAGGCGGGATAAATTGGGCAAACGGCTGAGTTCTCCCGCAGCCTTTGGGAGATTGGCCCTGAGAACCCAGAATAGATGCCCATTATACATCATGCGTGTGCTATGGAAAGGTCTGTGCCAGGCAAGCCTGAGAGCCTAATTCGCTATTCCTATGGGGTTCCATGCACCCATCCTGGCTGTCAGGCCCCAATACCCATCATACTTGACCTGTACTGGGTATTTTTTCACTCAGATCCCTCACTCTACAGTGACTCTACCAGAAATCTTGAATTCCAGATGAGCCACGTCATGCCATTGTCAGCATAGGAGGCCCTTTGAAGCCCCAAAATGGGTCATTTGCACTCCCTTCTTCTGCCTGCTCCTGTTCCCATGAGTGGTTGGCATGGAAAGGGCCATCAGTAGAACTTGGCTGGCAACATTTGCAGGAGCAGGAATCAACAGAGGACCCAGGAGAAAGGGATGGAGCCCAGGGCATGAAACATAGTCCAGATTCCTGCTGGTCAGAGCCCTAGAGAATAAGAGAAGCTTGCTGCTGGTGAGGGGGTATGGCCAGGATTCCTGGAGTCGGAAGAGCTTCAGCTTCACCATCTTGGGAGAAGAAGGAAGAAAGTGAAAGCGATGTGGTCCTTCTTAGTCCCAAGGACCCTGACAGCTTTCACATGTGATGTTTCAAGGCAACGGGGAGAGCTTCTTTACCAGAACGAGGGAGAAGATAAGACTAAAGCAGTAATGGTGGTAGGGACTGAAAATCACTTAGTCTTTTCTCTACTCTCTTTCTTTCCAAACTTTGAGTTGAGTGGTGAGCTTGGAAAACACTCCAAAACTCCTCGTGGCCTCTGGCACCAGTCTGACACCCAGTAGGAATGCAGGAGATTACGTTAGTTTTCATAATTTAGCATTGATCACTCCCAGCTCGTAGCTAAAGTTGATCAGTAACTGTTGGTTGGTTGGCTGGTTTGGGGCTTGGGGATCCCTGAGCCAACTCAAGGGCCAGAAAGGATTCCAGAGTGTTTCCACGGTCCTTCAATGTTCCTTAAGCATTCCCACTTTCTGAAGTGCCATACAGAGGCTTGGGGCAGAGACAGGGAGAGGGGATGACCAGAATGGATGGGGAGCCGGAAGGGCCGGGGCTCTGGGGACCCAGCTCAGAGCAGCGAGAACAGCGGAAAAGCAGGCAGATCAAAACAAACACAGTGTCTGGGAACACCAAGACCCTCCTAATCCCATCCCCGCCAAAGGGACCCCACCCTTATCCTCTTTAGGGGCGCGGC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-PPP3CC-1]] | + | [[Category:Intergenic]][[Category:lnc-PPP3CC-1]][[Category:NONHSAG049724]][[Category:Transcripts]] |
Latest revision as of 04:59, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-PPP3CC-1:2 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT125481 |
| Classification |
intergenic |
| Length |
1869 nt |
| Genomic location |
chr8+:22402216..22408678 |
| Exon number |
4 |
| Exons |
22402216..22402642,22405227..22405896,22407419..22407571,22408060..22408678 |
| Genome context |
|
| Sequence |
000001 CAAAAAAAAA AAAAAAAAAA AAAAAGAATT TTCATCCTGA CCAATCTGGG TGACCAATCA ATTAAATTGG TTTAGGAAGA 000080
000081 GCTTGCCCTA GATTGGTTGA TTTCATAATT TTTCTTTTTA TTAATTATTG GGTTTTTCTC TCTGATCTCT GCATTGAAAA 000160 000161 TTATTTCCTA AGCCATAAAG ACTTGTTGAG GTACCATTCT AGAATCCCCA ATATTTATTC TAGTTGTTAT AGTAACAGTG 000240 000241 GAACCCAAGT TTCTCCTAAA GCATTACCCA GCTTTCCTTG CCCAGGCAGA AAAGATGGCA GAGGGAGGGT GAACCCAGGG 000320 000321 CCCATCTGTG GGTATGGGCT CCAATTTCCT AAATTGTTTG TGGTTATAAC CATGGCTTCC ACCTTGTCTG GCACCGGGTC 000400 000401 CACATCTTTT CTGAGACCTG CTAGAAGAGC TGACAGCCAC TTGTTTGTTT CATCTTTCCT GAGAACTAAG AGAGGTTCAC 000480 000481 CCAGCTCAGT TCTTCTCAAA GACACCCCGT CTGTGCATTG TGCTTGTTTG CTCATCCATG AAAAGAGGAA GAGAGAACAG 000560 000561 CCGTGGATGT GATGTCAGTA TCAAAACTTC CTTGAGGACA GGCGGGATAA ATTGGGCAAA CGGCTGAGTT CTCCCGCAGC 000640 000641 CTTTGGGAGA TTGGCCCTGA GAACCCAGAA TAGATGCCCA TTATACATCA TGCGTGTGCT ATGGAAAGGT CTGTGCCAGG 000720 000721 CAAGCCTGAG AGCCTAATTC GCTATTCCTA TGGGGTTCCA TGCACCCATC CTGGCTGTCA GGCCCCAATA CCCATCATAC 000800 000801 TTGACCTGTA CTGGGTATTT TTTCACTCAG ATCCCTCACT CTACAGTGAC TCTACCAGAA ATCTTGAATT CCAGATGAGC 000880 000881 CACGTCATGC CATTGTCAGC ATAGGAGGCC CTTTGAAGCC CCAAAATGGG TCATTTGCAC TCCCTTCTTC TGCCTGCTCC 000960 000961 TGTTCCCATG AGTGGTTGGC ATGGAAAGGG CCATCAGTAG AACTTGGCTG GCAACATTTG CAGGAGCAGG AATCAACAGA 001040 001041 GGACCCAGGA GAAAGGGATG GAGCCCAGGG CATGAAACAT AGTCCAGATT CCTGCTGGTC AGAGCCCTAG AGAATAAGAG 001120 001121 AAGCTTGCTG CTGGTGAGGG GGTATGGCCA GGATTCCTGG AGTCGGAAGA GCTTCAGCTT CACCATCTTG GGAGAAGAAG 001200 001201 GAAGAAAGTG AAAGCGATGT GGTCCTTCTT AGTCCCAAGG ACCCTGACAG CTTTCACATG TGATGTTTCA AGGCAACGGG 001280 001281 GAGAGCTTCT TTACCAGAAC GAGGGAGAAG ATAAGACTAA AGCAGTAATG GTGGTAGGGA CTGAAAATCA CTTAGTCTTT 001360 001361 TCTCTACTCT CTTTCTTTCC AAACTTTGAG TTGAGTGGTG AGCTTGGAAA ACACTCCAAA ACTCCTCGTG GCCTCTGGCA 001440 001441 CCAGTCTGAC ACCCAGTAGG AATGCAGGAG ATTACGTTAG TTTTCATAAT TTAGCATTGA TCACTCCCAG CTCGTAGCTA 001520 001521 AAGTTGATCA GTAACTGTTG GTTGGTTGGC TGGTTTGGGG CTTGGGGATC CCTGAGCCAA CTCAAGGGCC AGAAAGGATT 001600 001601 CCAGAGTGTT TCCACGGTCC TTCAATGTTC CTTAAGCATT CCCACTTTCT GAAGTGCCAT ACAGAGGCTT GGGGCAGAGA 001680 001681 CAGGGAGAGG GGATGACCAG AATGGATGGG GAGCCGGAAG GGCCGGGGCT CTGGGGACCC AGCTCAGAGC AGCGAGAACA 001760 001761 GCGGAAAAGC AGGCAGATCA AAACAAACAC AGTGTCTGGG AACACCAAGA CCCTCCTAAT CCCATCCCCG CCAAAGGGAC 001840 001841 CCCACCCTTA TCCTCTTTAG GGGCGCGGC |