Difference between revisions of "ENST00000436659.1"

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sequence = <dnaseq>ACAACAGGAACACATATAGCTGGAATGCAGATGGGATCTGTGCTACTTACGCTAGCCATGGGATGATTAGAACAAGATAAGAGACATGAGGAAGACTTCTTCAAGGAGGTGCTCAAGCCATGTTTTGGAAAAGAGAACTCAAGGTCTGGCAGGGAGAAAGGAGCAAGGTCCTCTTCTCCCTGAAGGCTGTCACAGTTCCTGTGCAGAGAGAGAGGGCACTGCAGCACCCAGGCGCTGACTGCCTTTTGTCAGTCTCATTTGCAGGCCCCCAGCTGGAGAACCCAGGAGGAAGAGGAAAAAAGTTTTTTCCTCCTCTACACTCCCCATGCATGACTAAAGAGTAGGAGGAGTCAGCAAGGCAGACATATATAGTACCCAGGAGGTGGACAAACAACTGCCTTGGTGGAAACTCTGTCCTTTCTGGACTTATCCTGGTGCCACTGAGACTGTGCAGATTTAGATCTACAATCCACCTGGAATTGATTTTTGTATATGGAGTGAGGTCCCACACTTACAGGGAAAGCATCACCCGAAAGTGAGAATGCCTAGAGGCAGGAATCATGGAGGCTTCCTTAACCGTCTGTCTGCAACAGCAGGTGCTAGAGATGACACTGCAGAGTAGAGAACAAAGGAATCTTAGTAATTGTTCAATCCAATCTCCACACTTTAAAGATGAAGAAACTGGTATTGAGAAAAATACACAGCTTATCCAAGGTTGCACTGCTGGTTGGTAGCTGAGATGAATTTAGAACCCACATCTGATGACTACACCATATTGCTCCCAGTTTTCCTGTCTGTTCCACATGTAAAAGTCTGACTCTTCACTTCTCCTTTGAGTATATAGACTTTTAACATTTTTGTATGTCAAGATGGACTTTTCCTCATACCCAGCCCCTGCCTTTTCTCCTCCCTTCATACCTTGCAGGATCTTTAACAGAATTTAAAAGGAGTTTTTTGTTTTGTTTTGATGTATCTAATAAAAGTCAAGGGAGGGAGAGGGCCAGTATAAGCAAGAGTACAGTTTCCTAGTTTGTAGATGCGGTAGTCTGAGGAATCAGAAACACACAAAGGTTTGGAGAACTGGTACATGCTCCCAGGTGGGAAGCCAGGACTCTTGGTAGGATCTTGAGGACAAGGCAAAGGACAATAAGAGAGCGAGGGGATCCTAGAGGTGGAATCAAGGAAGAGAAACTAGAGAGAGAAAAAGGAACTGGCTATCCATCCATGATGGATCCTGTGTGGACTGATGGGTGGCTTGGCATCATCCTTTAGTAGACTTCATGTGGTTGAATAATTGGCCAATGGAAGGAATTTCTTTTTTGGTAACAGACTCTGTGTGTACAGTTATGGGTCTTAATTTATAATAAAAGGTTACATTGAAAATTGA</dnaseq>|
 
sequence = <dnaseq>ACAACAGGAACACATATAGCTGGAATGCAGATGGGATCTGTGCTACTTACGCTAGCCATGGGATGATTAGAACAAGATAAGAGACATGAGGAAGACTTCTTCAAGGAGGTGCTCAAGCCATGTTTTGGAAAAGAGAACTCAAGGTCTGGCAGGGAGAAAGGAGCAAGGTCCTCTTCTCCCTGAAGGCTGTCACAGTTCCTGTGCAGAGAGAGAGGGCACTGCAGCACCCAGGCGCTGACTGCCTTTTGTCAGTCTCATTTGCAGGCCCCCAGCTGGAGAACCCAGGAGGAAGAGGAAAAAAGTTTTTTCCTCCTCTACACTCCCCATGCATGACTAAAGAGTAGGAGGAGTCAGCAAGGCAGACATATATAGTACCCAGGAGGTGGACAAACAACTGCCTTGGTGGAAACTCTGTCCTTTCTGGACTTATCCTGGTGCCACTGAGACTGTGCAGATTTAGATCTACAATCCACCTGGAATTGATTTTTGTATATGGAGTGAGGTCCCACACTTACAGGGAAAGCATCACCCGAAAGTGAGAATGCCTAGAGGCAGGAATCATGGAGGCTTCCTTAACCGTCTGTCTGCAACAGCAGGTGCTAGAGATGACACTGCAGAGTAGAGAACAAAGGAATCTTAGTAATTGTTCAATCCAATCTCCACACTTTAAAGATGAAGAAACTGGTATTGAGAAAAATACACAGCTTATCCAAGGTTGCACTGCTGGTTGGTAGCTGAGATGAATTTAGAACCCACATCTGATGACTACACCATATTGCTCCCAGTTTTCCTGTCTGTTCCACATGTAAAAGTCTGACTCTTCACTTCTCCTTTGAGTATATAGACTTTTAACATTTTTGTATGTCAAGATGGACTTTTCCTCATACCCAGCCCCTGCCTTTTCTCCTCCCTTCATACCTTGCAGGATCTTTAACAGAATTTAAAAGGAGTTTTTTGTTTTGTTTTGATGTATCTAATAAAAGTCAAGGGAGGGAGAGGGCCAGTATAAGCAAGAGTACAGTTTCCTAGTTTGTAGATGCGGTAGTCTGAGGAATCAGAAACACACAAAGGTTTGGAGAACTGGTACATGCTCCCAGGTGGGAAGCCAGGACTCTTGGTAGGATCTTGAGGACAAGGCAAAGGACAATAAGAGAGCGAGGGGATCCTAGAGGTGGAATCAAGGAAGAGAAACTAGAGAGAGAAAAAGGAACTGGCTATCCATCCATGATGGATCCTGTGTGGACTGATGGGTGGCTTGGCATCATCCTTTAGTAGACTTCATGTGGTTGAATAATTGGCCAATGGAAGGAATTTCTTTTTTGGTAACAGACTCTGTGTGTACAGTTATGGGTCTTAATTTATAATAAAAGGTTACATTGAAAATTGA</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-RTN4IP1-2]]
+
[[Category:Intergenic]][[Category:lnc-RTN4IP1-2]][[Category:NONHSAG044512]][[Category:ENSG00000235142.3]][[Category:Transcripts]]

Latest revision as of 15:33, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000436659.1

Source

Gencode19

Same with

lnc-RTN4IP1-2:5,NONHSAT114258

Classification

intergenic

Length

1387 nt

Genomic location

chr6-:107165327..107235300

Exon number

7

Exons

107165327..107166117,107172442..107172535,107173217..107173264,107181857..107181952,107183173..107183293,107187576..107187645,107235134..107235300

Genome context

Sequence
000001 ACAACAGGAA CACATATAGC TGGAATGCAG ATGGGATCTG TGCTACTTAC GCTAGCCATG GGATGATTAG AACAAGATAA 000080
000081 GAGACATGAG GAAGACTTCT TCAAGGAGGT GCTCAAGCCA TGTTTTGGAA AAGAGAACTC AAGGTCTGGC AGGGAGAAAG 000160
000161 GAGCAAGGTC CTCTTCTCCC TGAAGGCTGT CACAGTTCCT GTGCAGAGAG AGAGGGCACT GCAGCACCCA GGCGCTGACT 000240
000241 GCCTTTTGTC AGTCTCATTT GCAGGCCCCC AGCTGGAGAA CCCAGGAGGA AGAGGAAAAA AGTTTTTTCC TCCTCTACAC 000320
000321 TCCCCATGCA TGACTAAAGA GTAGGAGGAG TCAGCAAGGC AGACATATAT AGTACCCAGG AGGTGGACAA ACAACTGCCT 000400
000401 TGGTGGAAAC TCTGTCCTTT CTGGACTTAT CCTGGTGCCA CTGAGACTGT GCAGATTTAG ATCTACAATC CACCTGGAAT 000480
000481 TGATTTTTGT ATATGGAGTG AGGTCCCACA CTTACAGGGA AAGCATCACC CGAAAGTGAG AATGCCTAGA GGCAGGAATC 000560
000561 ATGGAGGCTT CCTTAACCGT CTGTCTGCAA CAGCAGGTGC TAGAGATGAC ACTGCAGAGT AGAGAACAAA GGAATCTTAG 000640
000641 TAATTGTTCA ATCCAATCTC CACACTTTAA AGATGAAGAA ACTGGTATTG AGAAAAATAC ACAGCTTATC CAAGGTTGCA 000720
000721 CTGCTGGTTG GTAGCTGAGA TGAATTTAGA ACCCACATCT GATGACTACA CCATATTGCT CCCAGTTTTC CTGTCTGTTC 000800
000801 CACATGTAAA AGTCTGACTC TTCACTTCTC CTTTGAGTAT ATAGACTTTT AACATTTTTG TATGTCAAGA TGGACTTTTC 000880
000881 CTCATACCCA GCCCCTGCCT TTTCTCCTCC CTTCATACCT TGCAGGATCT TTAACAGAAT TTAAAAGGAG TTTTTTGTTT 000960
000961 TGTTTTGATG TATCTAATAA AAGTCAAGGG AGGGAGAGGG CCAGTATAAG CAAGAGTACA GTTTCCTAGT TTGTAGATGC 001040
001041 GGTAGTCTGA GGAATCAGAA ACACACAAAG GTTTGGAGAA CTGGTACATG CTCCCAGGTG GGAAGCCAGG ACTCTTGGTA 001120
001121 GGATCTTGAG GACAAGGCAA AGGACAATAA GAGAGCGAGG GGATCCTAGA GGTGGAATCA AGGAAGAGAA ACTAGAGAGA 001200
001201 GAAAAAGGAA CTGGCTATCC ATCCATGATG GATCCTGTGT GGACTGATGG GTGGCTTGGC ATCATCCTTT AGTAGACTTC 001280
001281 ATGTGGTTGA ATAATTGGCC AATGGAAGGA ATTTCTTTTT TGGTAACAGA CTCTGTGTGT ACAGTTATGG GTCTTAATTT 001360
001361 ATAATAAAAG GTTACATTGA AAATTGA
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