Difference between revisions of "NONHSAT098562"
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sequence = <dnaseq>TATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTTAGAAATAGGTTTGGGTTACATGAAAGCTTTATTTTACTGGAAACTTGGAATTTTAAGTGTTACTGTAATGTCTTATAATTTTGCTTAAAACAGTAGTCATTTTTGCTTATTCACATCTGAATATTTTCATCATTATGTAAAATTTAATGCCAGTTTTTCAGTTGGTAAGCTCTGAAATATTTTTAAAGTTTTTGTAATGAAGTTTGTGGTATATGTTTACAGTGAAATATATTCTTGTATGGGATGAATAGTAATTTGGGATGGTAACCTGATTCATTTTATTTTAAACAGCAGAATTGGCTGGTAATAAAGGGAAAAATTTCTTAACTTCATAAGTAATACTTGGTAATATAGAGATAAATTGAAAAATACCCAGA</dnaseq>| | sequence = <dnaseq>TATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTTAGAAATAGGTTTGGGTTACATGAAAGCTTTATTTTACTGGAAACTTGGAATTTTAAGTGTTACTGTAATGTCTTATAATTTTGCTTAAAACAGTAGTCATTTTTGCTTATTCACATCTGAATATTTTCATCATTATGTAAAATTTAATGCCAGTTTTTCAGTTGGTAAGCTCTGAAATATTTTTAAAGTTTTTGTAATGAAGTTTGTGGTATATGTTTACAGTGAAATATATTCTTGTATGGGATGAATAGTAATTTGGGATGGTAACCTGATTCATTTTATTTTAAACAGCAGAATTGGCTGGTAATAAAGGGAAAAATTTCTTAACTTCATAAGTAATACTTGGTAATATAGAGATAAATTGAAAAATACCCAGA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG039002]] | + | [[Category:Sense]][[Category:NONHSAG039002]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 01:07, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT098562 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
529 nt |
| Genomic location |
chr4+:144464786..144465509 |
| Exon number |
2 |
| Exons |
144464786..144464810,144465006..144465509 |
| Genome context |
|
| Sequence |
000001 TATTTTGGAA AGAGGTGCAA AGAAGACTGC AGAGATGAAT GAAAAGCTCT CCAAGATGGG CGAAAGTTCA CTTAGAAACT 000080
000081 TTACAATGGA TACAGAGTCA AGTGTTTATA ACTTCGAAGG AGAAGACTAT AGAGAAAAAC AAAAGGTAAT TTAGAAATAG 000160 000161 GTTTGGGTTA CATGAAAGCT TTATTTTACT GGAAACTTGG AATTTTAAGT GTTACTGTAA TGTCTTATAA TTTTGCTTAA 000240 000241 AACAGTAGTC ATTTTTGCTT ATTCACATCT GAATATTTTC ATCATTATGT AAAATTTAAT GCCAGTTTTT CAGTTGGTAA 000320 000321 GCTCTGAAAT ATTTTTAAAG TTTTTGTAAT GAAGTTTGTG GTATATGTTT ACAGTGAAAT ATATTCTTGT ATGGGATGAA 000400 000401 TAGTAATTTG GGATGGTAAC CTGATTCATT TTATTTTAAA CAGCAGAATT GGCTGGTAAT AAAGGGAAAA ATTTCTTAAC 000480 000481 TTCATAAGTA ATACTTGGTA ATATAGAGAT AAATTGAAAA ATACCCAGA |
Predicted Small Protein
| Name | NONHSAT098562_smProtein_38:148 |
| Length | 37 |
| Molecular weight | 4357.0456 |
| Aromaticity | 0.0833333333333 |
| Instability index | 86.9166666667 |
| Isoelectric point | 10.2888793945 |
| Runs | 6 |
| Runs residual | 0.0137917637918 |
| Runs probability | 0.0304569275158 |
| Amino acid sequence | MKSSPRWAKVHLETLQWIQSQVFITSKEKTIEKNKR |
| Secondary structure | LLLLLHHHHHHHHHHHHHHHHHEEELLHHHHHHLLL |
| PRMN | - |
| PiMo | - |
