Difference between revisions of "ENST00000580438.1"
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sequence = <dnaseq>CCCAACAACTCTCAGCATGGTAATCATTGTGCAAATATCATAGAACGTACTTACACAAATCTAGATTAGATGGTATAGCTTACTACAGAACTAGGATACATGGTATAGCCCGGGTGCTCCTAGGTTATAAAGCTGTACAGCATGTTACTATACTGAATGAATACTGTAAGCAACTGTAACAAAGTGTAAGTATTTATACATCTAAACCTAGAAAAGGTACAGTGAAAATATGGTGGTATAATCTTAAATGACTATTGTCAACTATGATCTCGTTGACTGAAATGTCAGCATGCGGCACATGACTGTATAACCAGACTTCTCATCAAAAACAAATGCTGAAAGAAAAACACATCAACTAACCAAGAAAAAAGAAACATATATGTCCACACAGAGACTTCTTTTTTTACACAAATGTTCATTGTACCTTTTTATAATAGCTGGGAACTGAAAACAGCCTGGAACTGAAAACAGCCCAGGTGTCCCTTAACAGATGAAGTCACAAACCACCGAAACATTCAACAATATGGATGAATCTCAAAAACATTATGTTGAGCAAAAAGAAACTTTTTACAACATATAAGTATTGTATGACTCTACTTACATAAAGTTCTGCGCAAGCTAAACTAAGATGAAAACAATCTGAACAATGTTAGGTTCTAGGGGTGGTGTGGGGGGAAGGAATAACTAGGAAGAGGTGTAGGTTCTATACCCTGATAGAACTTTCTGGCAAAGGTGTATACATTTGTCACAGCTCATGAAATGGTATATGTGGTCAACTGTATTTTCCAAAGATGGTCACAATAGAAGCCATTCCACATGCTCTTAACAATGTAACACTGTCATTTTTTCATCAGGTGGTGGAGTCTATGGCCCTTCTCCTTGAATCTGAGTGAAATTAGTGAGTCTTTCAATCCAAAGACTACAGTCATACCTCAACTATCTACAGAGGACTGGTTCCAGGACTCCCATGGATCCCAAAATCCAAGGATGCTTCGAATCCCTTATATAAAATGGCATGGTATTTGCATATAACCTACATGCATCTTCAAATATGTTAAACCATCTCTAGATTACTTATAATACCAAATACAATGTAATGCTATGTAAACAGTTGTTACAATGTATTGTCAAAGACAAGCTCTCCTTGCCAATCCCTGACCAAATGAGAGATTCATGAGCAAAATAAATAGTTGCTGATATTTAAGGCACTAAGTTTGGGGCAATGTATTACACAGCAATAAATAACTGGAACAGCATAGTAAATTCTAGTTAAAAATACTAAACTACTAAGTTTTAGTTAACATACATGCTCAAGTTAAGGGTGTGGTATACTAACAACTGCAACTTACTTTGAAAAGCATAAAAAAAGACACTAGAAGAAGACAGGATGGATAGATGGACAAGATAGAAGACAATAACAAATAGAACAAAATGTTGTGAAATTATATTCTACAATTATTTTAAAGTCTGTGTGGTTTGAAAAATTGTACGATAAAATGAAGAGTGAAATAA</dnaseq>| | sequence = <dnaseq>CCCAACAACTCTCAGCATGGTAATCATTGTGCAAATATCATAGAACGTACTTACACAAATCTAGATTAGATGGTATAGCTTACTACAGAACTAGGATACATGGTATAGCCCGGGTGCTCCTAGGTTATAAAGCTGTACAGCATGTTACTATACTGAATGAATACTGTAAGCAACTGTAACAAAGTGTAAGTATTTATACATCTAAACCTAGAAAAGGTACAGTGAAAATATGGTGGTATAATCTTAAATGACTATTGTCAACTATGATCTCGTTGACTGAAATGTCAGCATGCGGCACATGACTGTATAACCAGACTTCTCATCAAAAACAAATGCTGAAAGAAAAACACATCAACTAACCAAGAAAAAAGAAACATATATGTCCACACAGAGACTTCTTTTTTTACACAAATGTTCATTGTACCTTTTTATAATAGCTGGGAACTGAAAACAGCCTGGAACTGAAAACAGCCCAGGTGTCCCTTAACAGATGAAGTCACAAACCACCGAAACATTCAACAATATGGATGAATCTCAAAAACATTATGTTGAGCAAAAAGAAACTTTTTACAACATATAAGTATTGTATGACTCTACTTACATAAAGTTCTGCGCAAGCTAAACTAAGATGAAAACAATCTGAACAATGTTAGGTTCTAGGGGTGGTGTGGGGGGAAGGAATAACTAGGAAGAGGTGTAGGTTCTATACCCTGATAGAACTTTCTGGCAAAGGTGTATACATTTGTCACAGCTCATGAAATGGTATATGTGGTCAACTGTATTTTCCAAAGATGGTCACAATAGAAGCCATTCCACATGCTCTTAACAATGTAACACTGTCATTTTTTCATCAGGTGGTGGAGTCTATGGCCCTTCTCCTTGAATCTGAGTGAAATTAGTGAGTCTTTCAATCCAAAGACTACAGTCATACCTCAACTATCTACAGAGGACTGGTTCCAGGACTCCCATGGATCCCAAAATCCAAGGATGCTTCGAATCCCTTATATAAAATGGCATGGTATTTGCATATAACCTACATGCATCTTCAAATATGTTAAACCATCTCTAGATTACTTATAATACCAAATACAATGTAATGCTATGTAAACAGTTGTTACAATGTATTGTCAAAGACAAGCTCTCCTTGCCAATCCCTGACCAAATGAGAGATTCATGAGCAAAATAAATAGTTGCTGATATTTAAGGCACTAAGTTTGGGGCAATGTATTACACAGCAATAAATAACTGGAACAGCATAGTAAATTCTAGTTAAAAATACTAAACTACTAAGTTTTAGTTAACATACATGCTCAAGTTAAGGGTGTGGTATACTAACAACTGCAACTTACTTTGAAAAGCATAAAAAAAGACACTAGAAGAAGACAGGATGGATAGATGGACAAGATAGAAGACAATAACAAATAGAACAAAATGTTGTGAAATTATATTCTACAATTATTTTAAAGTCTGTGTGGTTTGAAAAATTGTACGATAAAATGAAGAGTGAAATAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intronic(AS)]][[Category:lnc-SNURF-3]] | + | [[Category:Intronic(AS)]][[Category:lnc-SNURF-3]][[Category:NONHSAG016302]][[Category:ENSG00000224078.8]][[Category:Transcripts]] |
Latest revision as of 18:14, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000580438.1 |
Source |
Gencode19 |
Same with |
lnc-SNURF-3:21,NONHSAT041145 |
Classification |
intronic(AS) |
Length |
1512 nt |
Genomic location |
chr15+:25663081..25664592 |
Exon number |
1 |
Exons |
25663081..25664592 |
Genome context |
|
Sequence |
000001 CCCAACAACT CTCAGCATGG TAATCATTGT GCAAATATCA TAGAACGTAC TTACACAAAT CTAGATTAGA TGGTATAGCT 000080
000081 TACTACAGAA CTAGGATACA TGGTATAGCC CGGGTGCTCC TAGGTTATAA AGCTGTACAG CATGTTACTA TACTGAATGA 000160 000161 ATACTGTAAG CAACTGTAAC AAAGTGTAAG TATTTATACA TCTAAACCTA GAAAAGGTAC AGTGAAAATA TGGTGGTATA 000240 000241 ATCTTAAATG ACTATTGTCA ACTATGATCT CGTTGACTGA AATGTCAGCA TGCGGCACAT GACTGTATAA CCAGACTTCT 000320 000321 CATCAAAAAC AAATGCTGAA AGAAAAACAC ATCAACTAAC CAAGAAAAAA GAAACATATA TGTCCACACA GAGACTTCTT 000400 000401 TTTTTACACA AATGTTCATT GTACCTTTTT ATAATAGCTG GGAACTGAAA ACAGCCTGGA ACTGAAAACA GCCCAGGTGT 000480 000481 CCCTTAACAG ATGAAGTCAC AAACCACCGA AACATTCAAC AATATGGATG AATCTCAAAA ACATTATGTT GAGCAAAAAG 000560 000561 AAACTTTTTA CAACATATAA GTATTGTATG ACTCTACTTA CATAAAGTTC TGCGCAAGCT AAACTAAGAT GAAAACAATC 000640 000641 TGAACAATGT TAGGTTCTAG GGGTGGTGTG GGGGGAAGGA ATAACTAGGA AGAGGTGTAG GTTCTATACC CTGATAGAAC 000720 000721 TTTCTGGCAA AGGTGTATAC ATTTGTCACA GCTCATGAAA TGGTATATGT GGTCAACTGT ATTTTCCAAA GATGGTCACA 000800 000801 ATAGAAGCCA TTCCACATGC TCTTAACAAT GTAACACTGT CATTTTTTCA TCAGGTGGTG GAGTCTATGG CCCTTCTCCT 000880 000881 TGAATCTGAG TGAAATTAGT GAGTCTTTCA ATCCAAAGAC TACAGTCATA CCTCAACTAT CTACAGAGGA CTGGTTCCAG 000960 000961 GACTCCCATG GATCCCAAAA TCCAAGGATG CTTCGAATCC CTTATATAAA ATGGCATGGT ATTTGCATAT AACCTACATG 001040 001041 CATCTTCAAA TATGTTAAAC CATCTCTAGA TTACTTATAA TACCAAATAC AATGTAATGC TATGTAAACA GTTGTTACAA 001120 001121 TGTATTGTCA AAGACAAGCT CTCCTTGCCA ATCCCTGACC AAATGAGAGA TTCATGAGCA AAATAAATAG TTGCTGATAT 001200 001201 TTAAGGCACT AAGTTTGGGG CAATGTATTA CACAGCAATA AATAACTGGA ACAGCATAGT AAATTCTAGT TAAAAATACT 001280 001281 AAACTACTAA GTTTTAGTTA ACATACATGC TCAAGTTAAG GGTGTGGTAT ACTAACAACT GCAACTTACT TTGAAAAGCA 001360 001361 TAAAAAAAGA CACTAGAAGA AGACAGGATG GATAGATGGA CAAGATAGAA GACAATAACA AATAGAACAA AATGTTGTGA 001440 001441 AATTATATTC TACAATTATT TTAAAGTCTG TGTGGTTTGA AAAATTGTAC GATAAAATGA AGAGTGAAAT AA |