Difference between revisions of "NONHSAT100946"
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sequence = <dnaseq>TTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACCAGCGCCGCAAAACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGGAAGTATGAGTTGGAGCGCCCAGCTGCCAACACCAAGATTGGCCCCCGCCGCATCCACACAGTCCGTGTGCAGGGAAGTAACAAGAAATACCGTGCCCTGAGGTTGGACGTGGGGGAATTTCTCCTGGGGCTCAGAGTGTTGTACTCGTAAAACAAGGATCATCGATGTTGTCTACAATGCATCTAATAATGAGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCGACAGCACACCGTGCCGACAGTGGTAAGATGTCCCACTACGTGCTGCCCCTGGGCCGCAAGAAGGGAGCCAAGCTGACTCCTGAGGAAGAAGAGATTTTAAACAAAAAACGATTTAAACAAATTCAGAAGAAATATGATGAAAGGAAAAAGAATGCCAAAATCAGCAGTCTCCTGGAAGAGCAGTTCCAGCAGGGCAAGCTTCTTGCATGCATCGCTTCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGGGCAAAGGGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGGAAAGGCAAATAAATCCTTGTTTTGTCTTCACCCATGTAATAAAGGTGTTTATTGTTTTGTTCCCCCCCCCCC</dnaseq>| | sequence = <dnaseq>TTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACCAGCGCCGCAAAACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGGAAGTATGAGTTGGAGCGCCCAGCTGCCAACACCAAGATTGGCCCCCGCCGCATCCACACAGTCCGTGTGCAGGGAAGTAACAAGAAATACCGTGCCCTGAGGTTGGACGTGGGGGAATTTCTCCTGGGGCTCAGAGTGTTGTACTCGTAAAACAAGGATCATCGATGTTGTCTACAATGCATCTAATAATGAGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCGACAGCACACCGTGCCGACAGTGGTAAGATGTCCCACTACGTGCTGCCCCTGGGCCGCAAGAAGGGAGCCAAGCTGACTCCTGAGGAAGAAGAGATTTTAAACAAAAAACGATTTAAACAAATTCAGAAGAAATATGATGAAAGGAAAAAGAATGCCAAAATCAGCAGTCTCCTGGAAGAGCAGTTCCAGCAGGGCAAGCTTCTTGCATGCATCGCTTCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGGGCAAAGGGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGGAAAGGCAAATAAATCCTTGTTTTGTCTTCACCCATGTAATAAAGGTGTTTATTGTTTTGTTCCCCCCCCCCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG040148]] | + | [[Category:Intergenic]][[Category:NONHSAG040148]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 01:17, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT100946 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
708 nt |
| Genomic location |
chr5+:33162266..33162973 |
| Exon number |
1 |
| Exons |
33162266..33162973 |
| Genome context |
|
| Sequence |
000001 TTCCAGCCAG CGCCGAGCGA TGGGCATCTC TCGGGACAAC TGGCACCAGC GCCGCAAAAC CGGGGGCAAG AGAAAGCCCT 000080
000081 ACCACAAGAA GCGGAAGTAT GAGTTGGAGC GCCCAGCTGC CAACACCAAG ATTGGCCCCC GCCGCATCCA CACAGTCCGT 000160 000161 GTGCAGGGAA GTAACAAGAA ATACCGTGCC CTGAGGTTGG ACGTGGGGGA ATTTCTCCTG GGGCTCAGAG TGTTGTACTC 000240 000241 GTAAAACAAG GATCATCGAT GTTGTCTACA ATGCATCTAA TAATGAGCTG GTTCGTACCA AGACCCTGGT GAAGAATTGC 000320 000321 ATCGTGCTCA TCGACAGCAC ACCGTGCCGA CAGTGGTAAG ATGTCCCACT ACGTGCTGCC CCTGGGCCGC AAGAAGGGAG 000400 000401 CCAAGCTGAC TCCTGAGGAA GAAGAGATTT TAAACAAAAA ACGATTTAAA CAAATTCAGA AGAAATATGA TGAAAGGAAA 000480 000481 AAGAATGCCA AAATCAGCAG TCTCCTGGAA GAGCAGTTCC AGCAGGGCAA GCTTCTTGCA TGCATCGCTT CAAGGCCGGG 000560 000561 ACAGTGTGGC CGAGCAGATG GCTATGTGCT AGAGGGCAAA GGGTTGGAGT TCTATCTTAG GAAAATCAAG GCCCGGAAAG 000640 000641 GCAAATAAAT CCTTGTTTTG TCTTCACCCA TGTAATAAAG GTGTTTATTG TTTTGTTCCC CCCCCCCC |
Predicted Small Protein
| Name | NONHSAT100946_smProtein_98:193 |
| Length | 32 |
| Molecular weight | 3355.8016 |
| Aromaticity | 0.0322580645161 |
| Instability index | 56.5161290323 |
| Isoelectric point | 10.2559204102 |
| Runs | 5 |
| Runs residual | 0.0399865591398 |
| Runs probability | 0.0424659954071 |
| Amino acid sequence | MSWSAQLPTPRLAPAASTQSVCREVTRNTVP |
| Secondary structure | LLEELLLLLLLLLLLLLLHHHHHHHHHLLLL |
| PRMN | - |
| PiMo | - |
