Difference between revisions of "Lnc-LCP2-2:1"

Latest revision as of 04:35, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-LCP2-2:1
Source	LNCipedia2.1
Same with	NONHSAT105036
Classification	intergenic
Length	2251 nt
Genomic location	chr5-:169618651..169626145
Exon number	4
Exons	169618651..169619267,169620920..169621010,169623488..169623646,169624762..169626145
Genome context
Sequence	000001 CACTCAGAGA GAAACAATGC ATTTTATCAT AGGGCCGGAC AGCTATATGC ACAAGATGCT ACCTGCAGAG ATTGGTTTTT 000080 000081 GCCCAGATGT GCAGGAGAGA TGCACAGAGA GGAAGAAATG CATACATGTG TGCAGGTTTT GGCGTGTGCA CAAGAAGCCT 000160 000161 GGAAGGATTT TCTTTGGATC TACAGTCAAA ATGGATTTCC GAGAGGAAGC TGTCTGAAAA CACACCTCTT CCCTGTGCTA 000240 000241 CATACGGTCC CATCTCTGCC AGCCAGGTTG TCAGGAAAGT GATCAGCACT GGCTTCAACT CTGGCTAGAG CTCTTTGGCC 000320 000321 AATGTGATGG GCAGAAAACT GGAATGAGGA CAGAAAAGCA CCTCAGAGGT TTGAAGAGTC TAGTCTCTCA CCACCTTGCT 000400 000401 GTAGGTTTTC TGAATACTTC TGAGTTTAGG AGCATTTTTT CTCAACAGGC AAGTCAGGAG CTGCTAAGAT AAACCATGGC 000480 000481 AGTAAGCTCG AGCCAGTGTT CGTATTTGCC ATTGATCGGC CACCAAGTGC TTGCTATGTG CCATGCATTG TGCTAAGCAC 000560 000561 TATCTCATTT AATATTTACA GCAATCTTAT GAGGTAGATG CTACTGTTAT CTCCATTTTA CAGATGGGGA AACTGAGGCA 000640 000641 CAGAGTTCCA CAGCTGGTAA CTTGAGGAAT AGGAATTCAA CCACTGGAGA GTCTGGCTGG AGTTTTTTGT GGTAGGAGAA 000720 000721 AATATGCTGT CTAAATTTGC CTTGGGAAAC CATCATGGTG GTCACAAAAC CACTTCTACG GCTTGCCTTG ACCTAGCAGG 000800 000801 AATGAAGATG TAAAGAAAGA ATGAGCGCGT CATGGTTATG ATGGGATGAT GATGTCTGTT GTGTTGTTTG GTGTCAGTTT 000880 000881 CTGTAACGCC TTTCTATTTC AATCAAGGCT ATTATCTTTT CCTCTGTTTT AGTGAAGTTT CCTTGAAGTA GAAAATGGGA 000960 000961 GTGTATTGGG CATCTCAGAG TTTTCAGCTG AACTGAAGGG TCTGATGGTA ACTTTACCCC CAAATCTCTG AGAGAAAAGC 001040 001041 AGGGAGTCCC TGCTTCAGCT CTGCTCAGAA GAGCCTCCCT CACATGGTGG TTTCTGTGTC ACTAGACTGG TTAACCAAAT 001120 001121 GGTTCTTCTA AATACCCAAC TTTTAATAGA AACTCCTGCG GCTTGGATTA TTAAAGTCCT AACATGCTTA TTTAATCGTG 001200 001201 TTTCAAGTCC ATCTATCTTT TTTGAGTCTA AGGAAGACTC ACTAGGTCAG AAGGAGTAGA GGGAAGAGGA TTAATACATG 001280 001281 ATTTTCTTTT TCCCCTTTTT CTTTTAACTT AGGCTGAGAC TTATTTGAAT GCCTGTTTCA TATGGAGCTT TTAAGTGTAA 001360 001361 CAGTTGTGAG TGAAATTGCC CCTTTTTATT GCCAGCGCTC CGAGTTTGCT TCTGCATGGA AGGGGAAGAT GGACTAGAGC 001440 001441 TGATACCTCC TGCACCCTGG TGAAGAAATG CACCCTGAGG CCAGAAAATA GTACAAACCC ATCTGGCTGC AACAGTCCAG 001520 001521 CAGCATGAAG ATCAAAGTCA CGTAGTAGAG CCAGAGAGAA ATTTGCCCTG GGCCTAATAT TCATGAAGCC TTTCCAATTC 001600 001601 AGACTCGGTA TTATTGCCAA GTCGGTGTGT TTGGGAGAAA TCAGAAGCCA ACACACTAGA AAAGTTGCAA GAGATTCCTA 001680 001681 GGGGAACCCA CAAATTCAGT TCCTTGCCAG AAACCTGCTC CTCCAGATGA ATCTAGTGCA TCAGATGGGC TCAGAAGCAC 001760 001761 AGGTGGCGCA GGCAGACCTC TACTGAGAAG AACAACAGTG GAAGGCAGAT GAAACTCACA TTTTGGAGTC TGAGAGCCAT 001840 001841 GCGGGCCCAC CCCAGTTACG TCTACCCCTG GTCGGTGACC AGAGAATCCT TTAGCAGCAA CAGCAGTGAT GTTTATTTCA 001920 001921 CTGGTATGTA TAAAGCGACT GATTGAAAAC AAGCTGTATG CCCAACAACT TGGAACTGGT TAAATGATTT TTGGTTC

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CACTCAGAGAGAAACAATGCATTTTATCATAGGGCCGGACAGCTATATGCACAAGATGCTACCTGCAGAGATTGGTTTTTGCCCAGATGTGCAGGAGAGATGCACAGAGAGGAAGAAATGCATACATGTGTGCAGGTTTTGGCGTGTGCACAAGAAGCCTGGAAGGATTTTCTTTGGATCTACAGTCAAAATGGATTTCCGAGAGGAAGCTGTCTGAAAACACACCTCTTCCCTGTGCTACATACGGTCCCATCTCTGCCAGCCAGGTTGTCAGGAAAGTGATCAGCACTGGCTTCAACTCTGGCTAGAGCTCTTTGGCCAATGTGATGGGCAGAAAACTGGAATGAGGACAGAAAAGCACCTCAGAGGTTTGAAGAGTCTAGTCTCTCACCACCTTGCTGTAGGTTTTCTGAATACTTCTGAGTTTAGGAGCATTTTTTCTCAACAGGCAAGTCAGGAGCTGCTAAGATAAACCATGGCAGTAAGCTCGAGCCAGTGTTCGTATTTGCCATTGATCGGCCACCAAGTGCTTGCTATGTGCCATGCATTGTGCTAAGCACTATCTCATTTAATATTTACAGCAATCTTATGAGGTAGATGCTACTGTTATCTCCATTTTACAGATGGGGAAACTGAGGCACAGAGTTCCACAGCTGGTAACTTGAGGAATAGGAATTCAACCACTGGAGAGTCTGGCTGGAGTTTTTTGTGGTAGGAGAAAATATGCTGTCTAAATTTGCCTTGGGAAACCATCATGGTGGTCACAAAACCACTTCTACGGCTTGCCTTGACCTAGCAGGAATGAAGATGTAAAGAAAGAATGAGCGCGTCATGGTTATGATGGGATGATGATGTCTGTTGTGTTGTTTGGTGTCAGTTTCTGTAACGCCTTTCTATTTCAATCAAGGCTATTATCTTTTCCTCTGTTTTAGTGAAGTTTCCTTGAAGTAGAAAATGGGAGTGTATTGGGCATCTCAGAGTTTTCAGCTGAACTGAAGGGTCTGATGGTAACTTTACCCCCAAATCTCTGAGAGAAAAGCAGGGAGTCCCTGCTTCAGCTCTGCTCAGAAGAGCCTCCCTCACATGGTGGTTTCTGTGTCACTAGACTGGTTAACCAAATGGTTCTTCTAAATACCCAACTTTTAATAGAAACTCCTGCGGCTTGGATTATTAAAGTCCTAACATGCTTATTTAATCGTGTTTCAAGTCCATCTATCTTTTTTGAGTCTAAGGAAGACTCACTAGGTCAGAAGGAGTAGAGGGAAGAGGATTAATACATGATTTTCTTTTTCCCCTTTTTCTTTTAACTTAGGCTGAGACTTATTTGAATGCCTGTTTCATATGGAGCTTTTAAGTGTAACAGTTGTGAGTGAAATTGCCCCTTTTTATTGCCAGCGCTCCGAGTTTGCTTCTGCATGGAAGGGGAAGATGGACTAGAGCTGATACCTCCTGCACCCTGGTGAAGAAATGCACCCTGAGGCCAGAAAATAGTACAAACCCATCTGGCTGCAACAGTCCAGCAGCATGAAGATCAAAGTCACGTAGTAGAGCCAGAGAGAAATTTGCCCTGGGCCTAATATTCATGAAGCCTTTCCAATTCAGACTCGGTATTATTGCCAAGTCGGTGTGTTTGGGAGAAATCAGAAGCCAACACACTAGAAAAGTTGCAAGAGATTCCTAGGGGAACCCACAAATTCAGTTCCTTGCCAGAAACCTGCTCCTCCAGATGAATCTAGTGCATCAGATGGGCTCAGAAGCACAGGTGGCGCAGGCAGACCTCTACTGAGAAGAACAACAGTGGAAGGCAGATGAAACTCACATTTTGGAGTCTGAGAGCCATGCGGGCCCACCCCAGTTACGTCTACCCCTGGTCGGTGACCAGAGAATCCTTTAGCAGCAACAGCAGTGATGTTTATTTCACTGGTATGTATAAAGCGACTGATTGAAAACAAGCTGTATGCCCAACAACTTGGAACTGGTTAAATGATTTTTGGTTCAGCCGCACAGTGGAATATCATGCGGCCATTAAGAATAAATAAAAAATCCTATACTTTCCATGTTCAACTTTAGACTGCAAACAACTGAAAAAACACCTTCATAATTAGGCTTCCTCAGATTAGAACGTGAAGTCAAATCAACGTGTGTCAGAAAGTTAACAACAGCTAACTGTTTGTTGTGGTGTTCTGAGTAACTTGTATTATTTTTCAGTTTTTTTCCCATTCCTAATGTGCAAATGTACTATTTTTATTGT</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-LCP2-2]][[Category:NONHSAG042192]]
+[[Category:Intergenic]][[Category:lnc-LCP2-2]][[Category:NONHSAG042192]][[Category:Transcripts]]