Difference between revisions of "ENST00000432384.1"
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sequence = <dnaseq>GACGGGGATCCGGAAGGCGTTGTCGGTGACATCACGGAGAGGGCGATTTCTATGTAGATGAGGCAGCGCAGGGGCTGCTGCTTTGCCACGAAAGAGTTCCCGTGCCGTGGGAGCAAGTCTGGGACCGCTGGTCGGACCGGAGAGTCGCAGCTGTGTGTTAGGGCTAGGATGGCTCCGGGATGCGCGTGACGCAAGTGACCTTGCGTGTAAAGGGATACATGATCCCTTAATTCAGGCTCAGGCTGAAGAACTGACCCACTTACGACAGAAGACACAGGAAGGGAGAGGTGTCTGCTACCTTTTTACCCAGCATGTGAAGAACACAGTCAAGTCTTTTGAGGGCCTTCTCAGGAACACTGACATTGCCTACTACCAGAGACAGAGATTCTGTGAGCAAATGGTACAAGGAAGCCAGCTGACAGAGATCCTTGTCAGAAAACTTGCCACAGAATCTTGCTCTCTTACCCAAGCTGGAGTGCAGTGACACGGTCTTGGCTGACTGCAATCTGTGCCTCCTGGGCTCAAGCAATCTTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGTGCCACCACACCTGGCTAATGTTTGTATTTTTTGTAGAGATAGGGTTTCTCCATGTTGTCCAGGCTTGTCTTGAACTACTGAGCTGAAGTAATCCACCTGCTTTGGACTCCCAAAGTGCTGGGATTACAGATATGAGCCACTGTGCCTGGCCTGAGAGTTCTTAGTTTCAATCAGTAAGAGA</dnaseq>| | sequence = <dnaseq>GACGGGGATCCGGAAGGCGTTGTCGGTGACATCACGGAGAGGGCGATTTCTATGTAGATGAGGCAGCGCAGGGGCTGCTGCTTTGCCACGAAAGAGTTCCCGTGCCGTGGGAGCAAGTCTGGGACCGCTGGTCGGACCGGAGAGTCGCAGCTGTGTGTTAGGGCTAGGATGGCTCCGGGATGCGCGTGACGCAAGTGACCTTGCGTGTAAAGGGATACATGATCCCTTAATTCAGGCTCAGGCTGAAGAACTGACCCACTTACGACAGAAGACACAGGAAGGGAGAGGTGTCTGCTACCTTTTTACCCAGCATGTGAAGAACACAGTCAAGTCTTTTGAGGGCCTTCTCAGGAACACTGACATTGCCTACTACCAGAGACAGAGATTCTGTGAGCAAATGGTACAAGGAAGCCAGCTGACAGAGATCCTTGTCAGAAAACTTGCCACAGAATCTTGCTCTCTTACCCAAGCTGGAGTGCAGTGACACGGTCTTGGCTGACTGCAATCTGTGCCTCCTGGGCTCAAGCAATCTTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGTGCCACCACACCTGGCTAATGTTTGTATTTTTTGTAGAGATAGGGTTTCTCCATGTTGTCCAGGCTTGTCTTGAACTACTGAGCTGAAGTAATCCACCTGCTTTGGACTCCCAAAGTGCTGGGATTACAGATATGAGCCACTGTGCCTGGCCTGAGAGTTCTTAGTTTCAATCAGTAAGAGA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-RP3-377D14.1.1-1]] | + | [[Category:Intergenic]][[Category:lnc-RP3-377D14.1.1-1]][[Category:NONHSAG002660]][[Category:Transcripts]] |
Latest revision as of 15:25, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000432384.1 |
Source |
Gencode19 |
Same with |
lnc-RP3-377D14.1.1-1:1,NONHSAT005740 |
Classification |
intergenic |
Length |
754 nt |
Genomic location |
chr1+:143687097..143705763 |
Exon number |
3 |
Exons |
143687097..143687309,143705011..143705246,143705459..143705763 |
Genome context |
|
Sequence |
000001 GACGGGGATC CGGAAGGCGT TGTCGGTGAC ATCACGGAGA GGGCGATTTC TATGTAGATG AGGCAGCGCA GGGGCTGCTG 000080
000081 CTTTGCCACG AAAGAGTTCC CGTGCCGTGG GAGCAAGTCT GGGACCGCTG GTCGGACCGG AGAGTCGCAG CTGTGTGTTA 000160 000161 GGGCTAGGAT GGCTCCGGGA TGCGCGTGAC GCAAGTGACC TTGCGTGTAA AGGGATACAT GATCCCTTAA TTCAGGCTCA 000240 000241 GGCTGAAGAA CTGACCCACT TACGACAGAA GACACAGGAA GGGAGAGGTG TCTGCTACCT TTTTACCCAG CATGTGAAGA 000320 000321 ACACAGTCAA GTCTTTTGAG GGCCTTCTCA GGAACACTGA CATTGCCTAC TACCAGAGAC AGAGATTCTG TGAGCAAATG 000400 000401 GTACAAGGAA GCCAGCTGAC AGAGATCCTT GTCAGAAAAC TTGCCACAGA ATCTTGCTCT CTTACCCAAG CTGGAGTGCA 000480 000481 GTGACACGGT CTTGGCTGAC TGCAATCTGT GCCTCCTGGG CTCAAGCAAT CTTCCCACCT CAGCCTCCCA AGTAGCTGGG 000560 000561 ACTACAGGTG TGTGCCACCA CACCTGGCTA ATGTTTGTAT TTTTTGTAGA GATAGGGTTT CTCCATGTTG TCCAGGCTTG 000640 000641 TCTTGAACTA CTGAGCTGAA GTAATCCACC TGCTTTGGAC TCCCAAAGTG CTGGGATTAC AGATATGAGC CACTGTGCCT 000720 000721 GGCCTGAGAG TTCTTAGTTT CAATCAGTAA GAGA |
Predicted Small Protein
Name | ENST00000432384.1_smProtein_590:658 |
Length | 23 |
Molecular weight | 2542.0644 |
Aromaticity | 0.181818181818 |
Instability index | 47.0272727273 |
Isoelectric point | 4.50567626953 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0210740151917 |
Amino acid sequence | MFVFFVEIGFLHVVQACLELLS |
Secondary structure | LEEEEEELLHHHHHHHHHHHHL |
PRMN | LHHHHHHHHHHHHHHHHHHHLL |
PiMo | i????????????????????? |