Difference between revisions of "NONHSAT102051"
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sequence = <dnaseq>CTCCTGGCGCGGCAAGTGGTTCTTCCTCAGCTCTCTCCTGCAGGTAAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAAAAAGAACATTACTGTCTTGCTGATCTTGCATCTTTAATGGATAAAACATTTGAGAGAAAGTTGCCTGTTAGTTCTTTAACAATATCACGGCTTATAGACAACATTTCCTCTCGGGAAGAGATAGATCATGCAGAGTATTACCTTTACAAGTGGAATTTTACCCGATGTGAACTGTTATGTACCTATTTTCAGTTAACACTGTTTTAAAACCTTTTCTACATTACCACATTTACTTCACTCTTTCTCACAGCTGCTAACAATTCCATTGTGAACTACCCACAAAACTCAGCcatgtgtacaaaaagtatgttcagtgcaacatcatttatggtagcaaaagactgaaacaacctaatgcacattaaataaagaactggtcaaaca</dnaseq>| | sequence = <dnaseq>CTCCTGGCGCGGCAAGTGGTTCTTCCTCAGCTCTCTCCTGCAGGTAAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAAAAAGAACATTACTGTCTTGCTGATCTTGCATCTTTAATGGATAAAACATTTGAGAGAAAGTTGCCTGTTAGTTCTTTAACAATATCACGGCTTATAGACAACATTTCCTCTCGGGAAGAGATAGATCATGCAGAGTATTACCTTTACAAGTGGAATTTTACCCGATGTGAACTGTTATGTACCTATTTTCAGTTAACACTGTTTTAAAACCTTTTCTACATTACCACATTTACTTCACTCTTTCTCACAGCTGCTAACAATTCCATTGTGAACTACCCACAAAACTCAGCcatgtgtacaaaaagtatgttcagtgcaacatcatttatggtagcaaaagactgaaacaacctaatgcacattaaataaagaactggtcaaaca</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG040666]] | + | [[Category:Sense]][[Category:NONHSAG040666]][[Category:Transcripts]] |
Latest revision as of 01:21, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT102051 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
486 nt |
| Genomic location |
chr5-:71590381..71616018 |
| Exon number |
5 |
| Exons |
71590381..71590615,71591358..71591416,71593459..71593529,71609908..71609985,71615976..71616018 |
| Genome context |
|
| Sequence |
000001 CTCCTGGCGC GGCAAGTGGT TCTTCCTCAG CTCTCTCCTG CAGGTAAAAG ATACCTGCTT TCTTCAGCCT ATGTAGACAG 000080
000081 CCACAAATGG GAAGCAAGAG AAAAAGAACA TTACTGTCTT GCTGATCTTG CATCTTTAAT GGATAAAACA TTTGAGAGAA 000160 000161 AGTTGCCTGT TAGTTCTTTA ACAATATCAC GGCTTATAGA CAACATTTCC TCTCGGGAAG AGATAGATCA TGCAGAGTAT 000240 000241 TACCTTTACA AGTGGAATTT TACCCGATGT GAACTGTTAT GTACCTATTT TCAGTTAACA CTGTTTTAAA ACCTTTTCTA 000320 000321 CATTACCACA TTTACTTCAC TCTTTCTCAC AGCTGCTAAC AATTCCATTG TGAACTACCC ACAAAACTCA GCcatgtgta 000400 000401 caaaaagtat gttcagtgca acatcattta tggtagcaaa agactgaaac aacctaatgc acattaaata aagaactggt 000480 000481 caaaca |
Predicted Small Protein
| Name | NONHSAT102051_smProtein_278:358 |
| Length | 27 |
| Molecular weight | 3161.6929 |
| Aromaticity | 0.230769230769 |
| Instability index | 67.7846153846 |
| Isoelectric point | 7.97906494141 |
| Runs | 6 |
| Runs residual | 0.0214669051878 |
| Runs probability | 0.0467820761938 |
| Amino acid sequence | MYLFSVNTVLKPFLHYHIYFTLSHSC |
| Secondary structure | LEEEELLLLLLHHHHEEEEEEELLLL |
| PRMN | - |
| PiMo | - |
