Difference between revisions of "NONHSAT124174"
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sequence = <dnaseq>GTGAAACTGCTATTGCCGGCGGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCATTTATTTCGGGTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGTCAGaaacacatggcgtaatgggaaaactggacagttacacaAGGCAGAAGGAGAGTAAGCGTCTCTATCTTTCTAATAGAAACAAGAACACAGTGGAAAACAAGACATAAAAACCTGGCAGTTGGAATGGGGTGGGAGAAGGCCTCATGTAGGCAAAAGGCACAGGCCTTCCTGAAAGCAGGGGAAGGATGAGATGAAGACTGCAATTAGAAGGGTCTAGGGATGTGAAAGGCCATGATGGTAAAGAGAAAAGCTCACACTACTCTTTTTTTAAACCTTTCCCCATCAGTAAGCTTATCTAGATCTTCTAGATCTCACCATCCTCTCCTGGCTGGATAACTTCTGCTCCCTACAACCAGTCCTGTCTGCCTCCAGCCCATGCCCCTCTG</dnaseq>| | sequence = <dnaseq>GTGAAACTGCTATTGCCGGCGGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCATTTATTTCGGGTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGTCAGaaacacatggcgtaatgggaaaactggacagttacacaAGGCAGAAGGAGAGTAAGCGTCTCTATCTTTCTAATAGAAACAAGAACACAGTGGAAAACAAGACATAAAAACCTGGCAGTTGGAATGGGGTGGGAGAAGGCCTCATGTAGGCAAAAGGCACAGGCCTTCCTGAAAGCAGGGGAAGGATGAGATGAAGACTGCAATTAGAAGGGTCTAGGGATGTGAAAGGCCATGATGGTAAAGAGAAAAGCTCACACTACTCTTTTTTTAAACCTTTCCCCATCAGTAAGCTTATCTAGATCTTCTAGATCTCACCATCCTCTCCTGGCTGGATAACTTCTGCTCCCTACAACCAGTCCTGTCTGCCTCCAGCCCATGCCCCTCTG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG049151]] | + | [[Category:Sense]][[Category:NONHSAG049151]][[Category:Transcripts]] |
Latest revision as of 06:49, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124174 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
524 nt |
Genomic location |
chr7+:150725560..150728713 |
Exon number |
2 |
Exons |
150725560..150725697,150728328..150728713 |
Genome context |
|
Sequence |
000001 GTGAAACTGC TATTGCCGGC GGCTCCTGTT TTACCGCGTC AGCATGCTGG TGCATTTATT TCGGGTCGGG ATTCGGGGTG 000080
000081 GCCCATTCCC AGGCAGGCTG CTACCGCCCC TCCGCTTCCA GACATTCTCA GCTGTCAGaa acacatggcg taatgggaaa 000160 000161 actggacagt tacacaAGGC AGAAGGAGAG TAAGCGTCTC TATCTTTCTA ATAGAAACAA GAACACAGTG GAAAACAAGA 000240 000241 CATAAAAACC TGGCAGTTGG AATGGGGTGG GAGAAGGCCT CATGTAGGCA AAAGGCACAG GCCTTCCTGA AAGCAGGGGA 000320 000321 AGGATGAGAT GAAGACTGCA ATTAGAAGGG TCTAGGGATG TGAAAGGCCA TGATGGTAAA GAGAAAAGCT CACACTACTC 000400 000401 TTTTTTTAAA CCTTTCCCCA TCAGTAAGCT TATCTAGATC TTCTAGATCT CACCATCCTC TCCTGGCTGG ATAACTTCTG 000480 000481 CTCCCTACAA CCAGTCCTGT CTGCCTCCAG CCCATGCCCC TCTG |
Predicted Small Protein
Name | NONHSAT124174_smProtein_152:244 |
Length | 31 |
Molecular weight | 3603.03 |
Aromaticity | 0.0666666666667 |
Instability index | 48.3733333333 |
Isoelectric point | 10.1154174805 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.041423776718 |
Amino acid sequence | MGKLDSYTRQKESKRLYLSNRNKNTVENKT |
Secondary structure | LLLLLLLLLLHHHHEEEEELLLLLLEELLL |
PRMN | - |
PiMo | - |