Difference between revisions of "ENST00000451774.1"

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sequence = <dnaseq>CGAAGGGGAAGAAAAGCTGTATCGATTGTTGAGATCTGGCGACTTGTTTAAATTTCATCAGCCTCACTTCTATGAACTCTCAGGCCTCACGTGTACCAGCTCTCTGCTCTCCTTTGCCTTGGGACGTTCCATCCCTGGAAGTTTCCCTGCCCACATCTTTGTAGAGAGTCCATTCTCCAAGCTTCAGTGTGTCATCTGTGAGGACCGTGACCCACCTGGTACATCGCCTCAGGGCATTCATTTCAGGCTCCTTCTAAATGGCCAAGAGACAACACCAACATTTTTGTAATGGCCTGCAAGGCCTTCCGAGATCTACCTCCTGCAACTCAGCTTCTCCTGTGCTCTCCTTCTGGACTCACTCTGCCTCAGCAACACTGGTCCCTGTTGCCCCACCAATATGCCAGGCCATGAGAGAAGCAGTACCTTATAATGGTTCCTTGTTCAAAGCACTCAATATTCCTAGGATGTGGTCTCCCAGCTGACTTCATAACTGAATCATCAGTAATTAATTTCATTGTTCTATTAGGACTTTACTGAAGACTCTAAGGAGGACCTGTATCTGTTGGGATCCTCAGGGCAAGCCACAGAAACAAGCTTTGGATACTAGAAGCAGAAAATGGAGATATTGAAGACTATTGTGGAGTTTACTGTGAGCCAGAGAACCAGGCTGGGGGGCTGTATCACTTAGAATGAGATCCAAACTCACACCATAGTTCCATCCTTGAGGTTGCCATGTTGCTGCCACCCCTCCTGCCACCCCACCACTGAAGCTTTGGATGCTGGATTCTGGGCACAGCAGGGAGAAGTGTTGCTTATTACCATTTTAGTATGTTTTCTTTCAAGACCTTTTCAAAATATACATACGTATTTTTATTTCTATTCAAAATGGGATACATTTTTGAAGGTTAGCAATATATTGTGAACATTTTCTTTCCATGCTCAGAAACATTTTTCTATAATGTAATTTATAGTGATATAAACTATCTCATAGACCTACCATAGTTTACCTAACAAATCCCAAATCATTTGTGCCATTTCTAAATTTTTATTATTTTATGTAATGCTTTAATGAACATCCTTGCATTTATATTTTATACAATTTTAGAAGTGGAATTACTGGTTCAAAATACATGGTGATTTTTAATTCTTCTGTTGAATATTGACAAATTGCAATCCTGAGAGTTATCTTGAAGGATAGAGTACATGCCCAGGGTTCTTTTTTAAGAAATAATTTGTAATGTGAAACAGAATAGGCTAAATGTTTTTTATTCTCTTAGTCCTACTCTGTCATTCTGCAGAGTTTCACTTATTTGGATTCAAATTCTAATTCCAGCCTACCTCTCTTTTTATATAATTGTTAGGAGGATTAAATTAGATGCATAAAATTGCTGCTTACTACATACATTGCACAAACTAAAAACTTTTCAAAGGTTAACTGTTTTTCTGGTTTATTTTTAAGACACAGGTTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCACGGCTCACTATAGCCTCATCCTGCTGCACTGAAGTGATCCTCTTGCCTCAGCCTCCTGAGTAGCTAGGACTACAGGCACGTGCCACCATACCCAGCTATTTTTTTAAAAATACATTTTTGTTGAGGCTGGGTCCCCTTTGTTGTCCAGGCTGGTCTTAAGCTCCTGGCCTCAAGCAATCCTTCCACTTCTACCTCCCAAAGTGTTGAGATTAGAGGTGTGAGCCACTCCACCTGACCCAAAGGTTAACTATTATTATTGTTATTATTAGTCTGTTTTTTTCCATTCATTTCCTCATTAGTCAACTTTTATTGTTTCAATGTTATTTTATTGTTTTTCAAAGACTCCTTATAGTCACAATATGTACATAATAAATTTTACCCTTTAAGGACACTGAGGTTCCAAATGAAAATGATATTTTTAAGGTGAAACAATTATAGATAGAAAAACAACTTTTTTTTCTGTGAGTACTAGATTTCATATTATCCTTAATGTCTTTCTAGGTAGTAACCAAGTGATTTCTCATAAACTGGAAAACATTATTCCCACTGATATTCTTAAAAACATTTAGGATTAAAAAATGTATTTTAAA</dnaseq>|
 
sequence = <dnaseq>CGAAGGGGAAGAAAAGCTGTATCGATTGTTGAGATCTGGCGACTTGTTTAAATTTCATCAGCCTCACTTCTATGAACTCTCAGGCCTCACGTGTACCAGCTCTCTGCTCTCCTTTGCCTTGGGACGTTCCATCCCTGGAAGTTTCCCTGCCCACATCTTTGTAGAGAGTCCATTCTCCAAGCTTCAGTGTGTCATCTGTGAGGACCGTGACCCACCTGGTACATCGCCTCAGGGCATTCATTTCAGGCTCCTTCTAAATGGCCAAGAGACAACACCAACATTTTTGTAATGGCCTGCAAGGCCTTCCGAGATCTACCTCCTGCAACTCAGCTTCTCCTGTGCTCTCCTTCTGGACTCACTCTGCCTCAGCAACACTGGTCCCTGTTGCCCCACCAATATGCCAGGCCATGAGAGAAGCAGTACCTTATAATGGTTCCTTGTTCAAAGCACTCAATATTCCTAGGATGTGGTCTCCCAGCTGACTTCATAACTGAATCATCAGTAATTAATTTCATTGTTCTATTAGGACTTTACTGAAGACTCTAAGGAGGACCTGTATCTGTTGGGATCCTCAGGGCAAGCCACAGAAACAAGCTTTGGATACTAGAAGCAGAAAATGGAGATATTGAAGACTATTGTGGAGTTTACTGTGAGCCAGAGAACCAGGCTGGGGGGCTGTATCACTTAGAATGAGATCCAAACTCACACCATAGTTCCATCCTTGAGGTTGCCATGTTGCTGCCACCCCTCCTGCCACCCCACCACTGAAGCTTTGGATGCTGGATTCTGGGCACAGCAGGGAGAAGTGTTGCTTATTACCATTTTAGTATGTTTTCTTTCAAGACCTTTTCAAAATATACATACGTATTTTTATTTCTATTCAAAATGGGATACATTTTTGAAGGTTAGCAATATATTGTGAACATTTTCTTTCCATGCTCAGAAACATTTTTCTATAATGTAATTTATAGTGATATAAACTATCTCATAGACCTACCATAGTTTACCTAACAAATCCCAAATCATTTGTGCCATTTCTAAATTTTTATTATTTTATGTAATGCTTTAATGAACATCCTTGCATTTATATTTTATACAATTTTAGAAGTGGAATTACTGGTTCAAAATACATGGTGATTTTTAATTCTTCTGTTGAATATTGACAAATTGCAATCCTGAGAGTTATCTTGAAGGATAGAGTACATGCCCAGGGTTCTTTTTTAAGAAATAATTTGTAATGTGAAACAGAATAGGCTAAATGTTTTTTATTCTCTTAGTCCTACTCTGTCATTCTGCAGAGTTTCACTTATTTGGATTCAAATTCTAATTCCAGCCTACCTCTCTTTTTATATAATTGTTAGGAGGATTAAATTAGATGCATAAAATTGCTGCTTACTACATACATTGCACAAACTAAAAACTTTTCAAAGGTTAACTGTTTTTCTGGTTTATTTTTAAGACACAGGTTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCACGGCTCACTATAGCCTCATCCTGCTGCACTGAAGTGATCCTCTTGCCTCAGCCTCCTGAGTAGCTAGGACTACAGGCACGTGCCACCATACCCAGCTATTTTTTTAAAAATACATTTTTGTTGAGGCTGGGTCCCCTTTGTTGTCCAGGCTGGTCTTAAGCTCCTGGCCTCAAGCAATCCTTCCACTTCTACCTCCCAAAGTGTTGAGATTAGAGGTGTGAGCCACTCCACCTGACCCAAAGGTTAACTATTATTATTGTTATTATTAGTCTGTTTTTTTCCATTCATTTCCTCATTAGTCAACTTTTATTGTTTCAATGTTATTTTATTGTTTTTCAAAGACTCCTTATAGTCACAATATGTACATAATAAATTTTACCCTTTAAGGACACTGAGGTTCCAAATGAAAATGATATTTTTAAGGTGAAACAATTATAGATAGAAAAACAACTTTTTTTTCTGTGAGTACTAGATTTCATATTATCCTTAATGTCTTTCTAGGTAGTAACCAAGTGATTTCTCATAAACTGGAAAACATTATTCCCACTGATATTCTTAAAAACATTTAGGATTAAAAAATGTATTTTAAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000226674.4]]
+
[[Category:Intergenic]][[Category:ENSG00000226674.4]][[Category:lnc-ARHGAP15-6]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 16:01, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000451774.1

Source

Gencode19

Same with

lnc-ARHGAP15-6:6

Classification

intergenic

Length

2098 nt

Genomic location

chr2+:145425593..145831662

Exon number

5

Exons

145425593..145425675,145525665..145525847,145661233..145661370,145828387..145828508,145830091..145831662

Genome context

Sequence
000001 CGAAGGGGAA GAAAAGCTGT ATCGATTGTT GAGATCTGGC GACTTGTTTA AATTTCATCA GCCTCACTTC TATGAACTCT 000080
000081 CAGGCCTCAC GTGTACCAGC TCTCTGCTCT CCTTTGCCTT GGGACGTTCC ATCCCTGGAA GTTTCCCTGC CCACATCTTT 000160
000161 GTAGAGAGTC CATTCTCCAA GCTTCAGTGT GTCATCTGTG AGGACCGTGA CCCACCTGGT ACATCGCCTC AGGGCATTCA 000240
000241 TTTCAGGCTC CTTCTAAATG GCCAAGAGAC AACACCAACA TTTTTGTAAT GGCCTGCAAG GCCTTCCGAG ATCTACCTCC 000320
000321 TGCAACTCAG CTTCTCCTGT GCTCTCCTTC TGGACTCACT CTGCCTCAGC AACACTGGTC CCTGTTGCCC CACCAATATG 000400
000401 CCAGGCCATG AGAGAAGCAG TACCTTATAA TGGTTCCTTG TTCAAAGCAC TCAATATTCC TAGGATGTGG TCTCCCAGCT 000480
000481 GACTTCATAA CTGAATCATC AGTAATTAAT TTCATTGTTC TATTAGGACT TTACTGAAGA CTCTAAGGAG GACCTGTATC 000560
000561 TGTTGGGATC CTCAGGGCAA GCCACAGAAA CAAGCTTTGG ATACTAGAAG CAGAAAATGG AGATATTGAA GACTATTGTG 000640
000641 GAGTTTACTG TGAGCCAGAG AACCAGGCTG GGGGGCTGTA TCACTTAGAA TGAGATCCAA ACTCACACCA TAGTTCCATC 000720
000721 CTTGAGGTTG CCATGTTGCT GCCACCCCTC CTGCCACCCC ACCACTGAAG CTTTGGATGC TGGATTCTGG GCACAGCAGG 000800
000801 GAGAAGTGTT GCTTATTACC ATTTTAGTAT GTTTTCTTTC AAGACCTTTT CAAAATATAC ATACGTATTT TTATTTCTAT 000880
000881 TCAAAATGGG ATACATTTTT GAAGGTTAGC AATATATTGT GAACATTTTC TTTCCATGCT CAGAAACATT TTTCTATAAT 000960
000961 GTAATTTATA GTGATATAAA CTATCTCATA GACCTACCAT AGTTTACCTA ACAAATCCCA AATCATTTGT GCCATTTCTA 001040
001041 AATTTTTATT ATTTTATGTA ATGCTTTAAT GAACATCCTT GCATTTATAT TTTATACAAT TTTAGAAGTG GAATTACTGG 001120
001121 TTCAAAATAC ATGGTGATTT TTAATTCTTC TGTTGAATAT TGACAAATTG CAATCCTGAG AGTTATCTTG AAGGATAGAG 001200
001201 TACATGCCCA GGGTTCTTTT TTAAGAAATA ATTTGTAATG TGAAACAGAA TAGGCTAAAT GTTTTTTATT CTCTTAGTCC 001280
001281 TACTCTGTCA TTCTGCAGAG TTTCACTTAT TTGGATTCAA ATTCTAATTC CAGCCTACCT CTCTTTTTAT ATAATTGTTA 001360
001361 GGAGGATTAA ATTAGATGCA TAAAATTGCT GCTTACTACA TACATTGCAC AAACTAAAAA CTTTTCAAAG GTTAACTGTT 001440
001441 TTTCTGGTTT ATTTTTAAGA CACAGGTTCT TGCTCTGTTG CCCAGGCTGG AGTGCAGTGG TGTGATCACG GCTCACTATA 001520
001521 GCCTCATCCT GCTGCACTGA AGTGATCCTC TTGCCTCAGC CTCCTGAGTA GCTAGGACTA CAGGCACGTG CCACCATACC 001600
001601 CAGCTATTTT TTTAAAAATA CATTTTTGTT GAGGCTGGGT CCCCTTTGTT GTCCAGGCTG GTCTTAAGCT CCTGGCCTCA 001680
001681 AGCAATCCTT CCACTTCTAC CTCCCAAAGT GTTGAGATTA GAGGTGTGAG CCACTCCACC TGACCCAAAG GTTAACTATT 001760
001761 ATTATTGTTA TTATTAGTCT GTTTTTTTCC ATTCATTTCC TCATTAGTCA ACTTTTATTG TTTCAATGTT ATTTTATTGT 001840
001841 TTTTCAAAGA CTCCTTATAG TCACAATATG TACATAATAA ATTTTACCCT TTAAGGACAC TGAGGTTCCA AATGAAAATG 001920
001921 ATATTTTTAA GGTGAAACAA TTATAGATAG AAAAACAACT TTTTTTTCTG TGAGTACTAG ATTTCATATT ATCCTTAATG 002000
002001 T