Difference between revisions of "NONHSAT083074"
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sequence = <dnaseq>cgggccctgggcggggccTTCCCGGCTGACGGCCTGCGTGCACTGCGCTTGCGCGGGTTGAGGGCGGTGGCTCAGGCTCCTGGAAAGGACCGTCCACCCCTCCGCGCTGGCGGTGTGGACGCGGAACTCAGCGGAGAAACGCGATTGAGGTTGGAGAAAAAGTCTTCCCCATCTGGAGATGACAGTTGATGCTTTATTTGGAAAGCAGTGTGCATATCTTGAGGGGTGATGAACACAAGCAAACCAAGTTGCACCTGGCTTCTGCACACTCCTGCGAAAGTCGGTGAACATTCACTCCACATTGACCCCTCCCTAGCCTGGCAGGTGACGTCAGGGTCCTTCACAGACAAACACGCTTGGGCTCGGCAGGAGCTGCCGTGGCCACCCCCGCTGCCCAGTGTCTGCCCTCTAGAAGTAGGCTGTGTTTCCAGGTGTTCACCCGTGGTGCCCACAGTGCCGACCCGTGGCTGGGTCGGAGCTCCATGTTCCTAAGCTAGGTCTAGGTCTACACTCCTAGGACGCACGCATATCAGCCCGTGTACCCTGTGACAGTGACTGTCCCCACCTCCTATGTTAGTGGTGCCCTTACTGCCGTCGCTCATCCACTCGTGTGGGACGTAGGATTGCACAGGGCTGTGCCAGTGGCGTGTAGGGAACACTGCCCTGGCTCAGCGTGCGAGCTAAGGTGGTGATGTATGCGATGGGACTCTGCATGGGATAGTACAGTTGTGTAGACGTCTTCCAAATAAATTATGTGTtggtccatcgcacatgctcaataaatatttttaaatgagtgaatGTC</dnaseq>| | sequence = <dnaseq>cgggccctgggcggggccTTCCCGGCTGACGGCCTGCGTGCACTGCGCTTGCGCGGGTTGAGGGCGGTGGCTCAGGCTCCTGGAAAGGACCGTCCACCCCTCCGCGCTGGCGGTGTGGACGCGGAACTCAGCGGAGAAACGCGATTGAGGTTGGAGAAAAAGTCTTCCCCATCTGGAGATGACAGTTGATGCTTTATTTGGAAAGCAGTGTGCATATCTTGAGGGGTGATGAACACAAGCAAACCAAGTTGCACCTGGCTTCTGCACACTCCTGCGAAAGTCGGTGAACATTCACTCCACATTGACCCCTCCCTAGCCTGGCAGGTGACGTCAGGGTCCTTCACAGACAAACACGCTTGGGCTCGGCAGGAGCTGCCGTGGCCACCCCCGCTGCCCAGTGTCTGCCCTCTAGAAGTAGGCTGTGTTTCCAGGTGTTCACCCGTGGTGCCCACAGTGCCGACCCGTGGCTGGGTCGGAGCTCCATGTTCCTAAGCTAGGTCTAGGTCTACACTCCTAGGACGCACGCATATCAGCCCGTGTACCCTGTGACAGTGACTGTCCCCACCTCCTATGTTAGTGGTGCCCTTACTGCCGTCGCTCATCCACTCGTGTGGGACGTAGGATTGCACAGGGCTGTGCCAGTGGCGTGTAGGGAACACTGCCCTGGCTCAGCGTGCGAGCTAAGGTGGTGATGTATGCGATGGGACTCTGCATGGGATAGTACAGTTGTGTAGACGTCTTCCAAATAAATTATGTGTtggtccatcgcacatgctcaataaatatttttaaatgagtgaatGTC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG033135]] | + | [[Category:Sense]][[Category:NONHSAG033135]][[Category:Transcripts]] |
Latest revision as of 00:12, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083074 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
805 nt |
Genomic location |
chr21+:48055527..48084862 |
Exon number |
2 |
Exons |
48055527..48055675,48084207..48084862 |
Genome context |
|
Sequence |
000001 cgggccctgg gcggggccTT CCCGGCTGAC GGCCTGCGTG CACTGCGCTT GCGCGGGTTG AGGGCGGTGG CTCAGGCTCC 000080
000081 TGGAAAGGAC CGTCCACCCC TCCGCGCTGG CGGTGTGGAC GCGGAACTCA GCGGAGAAAC GCGATTGAGG TTGGAGAAAA 000160 000161 AGTCTTCCCC ATCTGGAGAT GACAGTTGAT GCTTTATTTG GAAAGCAGTG TGCATATCTT GAGGGGTGAT GAACACAAGC 000240 000241 AAACCAAGTT GCACCTGGCT TCTGCACACT CCTGCGAAAG TCGGTGAACA TTCACTCCAC ATTGACCCCT CCCTAGCCTG 000320 000321 GCAGGTGACG TCAGGGTCCT TCACAGACAA ACACGCTTGG GCTCGGCAGG AGCTGCCGTG GCCACCCCCG CTGCCCAGTG 000400 000401 TCTGCCCTCT AGAAGTAGGC TGTGTTTCCA GGTGTTCACC CGTGGTGCCC ACAGTGCCGA CCCGTGGCTG GGTCGGAGCT 000480 000481 CCATGTTCCT AAGCTAGGTC TAGGTCTACA CTCCTAGGAC GCACGCATAT CAGCCCGTGT ACCCTGTGAC AGTGACTGTC 000560 000561 CCCACCTCCT ATGTTAGTGG TGCCCTTACT GCCGTCGCTC ATCCACTCGT GTGGGACGTA GGATTGCACA GGGCTGTGCC 000640 000641 AGTGGCGTGT AGGGAACACT GCCCTGGCTC AGCGTGCGAG CTAAGGTGGT GATGTATGCG ATGGGACTCT GCATGGGATA 000720 000721 GTACAGTTGT GTAGACGTCT TCCAAATAAA TTATGTGTtg gtccatcgca catgctcaat aaatattttt aaatgagtga 000800 000801 atGTC |
Predicted Small Protein
Name | NONHSAT083074_smProtein_188:286 |
Length | 33 |
Molecular weight | 3677.1333 |
Aromaticity | 0.03125 |
Instability index | 74.190625 |
Isoelectric point | 6.89251708984 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0311908547203 |
Amino acid sequence | MLYLESSVHILRGDEHKQTKLHLASAHSCESR |
Secondary structure | LEEEELLEEEELLLLHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |