Difference between revisions of "NONHSAT104295"

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sequence = <dnaseq>tggcacacgtttgtagtcccagctacttgggaagctcaggcaggagaaacttgaacccaggaggtagagttcgcagtgagtagagatcacactgctgcactccaaagtgagactccatctcaaaaaaaaaaaaaaaaaaGTAGAACTTTACAAACACTACAGTGCATTTTCTAGAAAATTTTTTCTAggccgggcgcggtggctcacgcctgactccgactcaaaaaaaaaaaaaaaagaaaaagaaaaaTTTTTCTAAATCTCCATTGTTAAGAGATCACTGTGAGGTAGGGTAGGGAGTGTGGGGAAAGATTGGGGCCCCCAGGTTTGAAGATCAGCTTGGTCTTGCCTGTGTGCATGTATCTGATAAAATGCAGGAAAAGTTTGTCTCTTCCCCACCCTCACTTCCACCCACTGTGAGGCTTGCTCATGTCCAGATTGGGCTCAGGATGGCAGTTGTGGATGCTCAGAGCACAAAAGGCTTCTTGTTTGCCCAAGGGCCTATCAGTGTTTAAATAGAACTGGCGGAAGCACAAGCACACCGTATCAGCAGCTTATCAGGGACCATGGTTTTCCACGTACATTTGCTAGGCACTTCAGTTTACCCAACTCCATCAGCACTGAGTTAAATTGCAAGGTTGGGCTGTACTACGCTGAGCCAGGGCAGGGAGAACAAGCCAGTTACTGGGGATGAGGGTGTCGGGGGGGCCCTCAAGACCTTATTTGCATTCTGCCCACATAGAGAATAAAGCTGTGATAGCCTGTGTACTAAGAGGCACCCAAAGAGAACCAGTCAGTCTTAGGAATGCACCCGGAAGGTGGGATGAGTCCAGGCCTCCCTATGGTGGAAGTAGTTGGAGATACCTCTTGTTACCCTGGTTTTCCATCTTAGTTTACCAGGTGTATAGTCAGTGCGGGTTATGGTTAAAGGAGGTGTCAATTGGGGGCCTGTTAATGTCTTAAAATTGTATGCAATTTTGGGGTTTGCAAATGCGTCTGCGTGCATATTTCTCTGGCAGCTGACCTATGAATCAAAGGACTAAATGTTCTTGTACTATTCGGGCTGCATCTTCTTTGAGGGTAATCTTCAGGGCAGATACATGGGTAGCCTACTTTAGAAATGAGGCCTTTGCAATTATAATCActcctactttctaagcacttgctatatgccaggtgctgtgctaaatgctttataaatgttatcacatttaattctcagaaaatcttatgagataggaatttttatttctaaaagagttataatttgcccatgatcacagagctaagtaaatgatagagctatgatcggaacttcaactttctgattccaTGTCTGTTAGCACTGTGGAAGGCTGTCTTTGGCATTTTAATATACTTATCAAGTGTTTCATATACATTGGTTAATTTGTCCAACTGCCACAGAGTGGGATGGGTGGCTCTTtttcctaaactgtagccatcttttccccaaagtgtagccttcatgaattttgccctatttatatatcacctatgctattaagttacctaccatttaaaatttttaattaaatgtgttatttcttaccctcattcctaaataatagccatggaaaaaccattgatgtgctaatttttttcttgaatccacactaaaataactacataaccattaaaatgaaaaatgcattagcc</dnaseq>|
 
sequence = <dnaseq>tggcacacgtttgtagtcccagctacttgggaagctcaggcaggagaaacttgaacccaggaggtagagttcgcagtgagtagagatcacactgctgcactccaaagtgagactccatctcaaaaaaaaaaaaaaaaaaGTAGAACTTTACAAACACTACAGTGCATTTTCTAGAAAATTTTTTCTAggccgggcgcggtggctcacgcctgactccgactcaaaaaaaaaaaaaaaagaaaaagaaaaaTTTTTCTAAATCTCCATTGTTAAGAGATCACTGTGAGGTAGGGTAGGGAGTGTGGGGAAAGATTGGGGCCCCCAGGTTTGAAGATCAGCTTGGTCTTGCCTGTGTGCATGTATCTGATAAAATGCAGGAAAAGTTTGTCTCTTCCCCACCCTCACTTCCACCCACTGTGAGGCTTGCTCATGTCCAGATTGGGCTCAGGATGGCAGTTGTGGATGCTCAGAGCACAAAAGGCTTCTTGTTTGCCCAAGGGCCTATCAGTGTTTAAATAGAACTGGCGGAAGCACAAGCACACCGTATCAGCAGCTTATCAGGGACCATGGTTTTCCACGTACATTTGCTAGGCACTTCAGTTTACCCAACTCCATCAGCACTGAGTTAAATTGCAAGGTTGGGCTGTACTACGCTGAGCCAGGGCAGGGAGAACAAGCCAGTTACTGGGGATGAGGGTGTCGGGGGGGCCCTCAAGACCTTATTTGCATTCTGCCCACATAGAGAATAAAGCTGTGATAGCCTGTGTACTAAGAGGCACCCAAAGAGAACCAGTCAGTCTTAGGAATGCACCCGGAAGGTGGGATGAGTCCAGGCCTCCCTATGGTGGAAGTAGTTGGAGATACCTCTTGTTACCCTGGTTTTCCATCTTAGTTTACCAGGTGTATAGTCAGTGCGGGTTATGGTTAAAGGAGGTGTCAATTGGGGGCCTGTTAATGTCTTAAAATTGTATGCAATTTTGGGGTTTGCAAATGCGTCTGCGTGCATATTTCTCTGGCAGCTGACCTATGAATCAAAGGACTAAATGTTCTTGTACTATTCGGGCTGCATCTTCTTTGAGGGTAATCTTCAGGGCAGATACATGGGTAGCCTACTTTAGAAATGAGGCCTTTGCAATTATAATCActcctactttctaagcacttgctatatgccaggtgctgtgctaaatgctttataaatgttatcacatttaattctcagaaaatcttatgagataggaatttttatttctaaaagagttataatttgcccatgatcacagagctaagtaaatgatagagctatgatcggaacttcaactttctgattccaTGTCTGTTAGCACTGTGGAAGGCTGTCTTTGGCATTTTAATATACTTATCAAGTGTTTCATATACATTGGTTAATTTGTCCAACTGCCACAGAGTGGGATGGGTGGCTCTTtttcctaaactgtagccatcttttccccaaagtgtagccttcatgaattttgccctatttatatatcacctatgctattaagttacctaccatttaaaatttttaattaaatgtgttatttcttaccctcattcctaaataatagccatggaaaaaccattgatgtgctaatttttttcttgaatccacactaaaataactacataaccattaaaatgaaaaatgcattagcc</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG041789]]
+
[[Category:Intergenic]][[Category:NONHSAG041789]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 01:31, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT104295

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1677 nt

Genomic location

chr5+:141545187..141547111

Exon number

2

Exons

141545187..141545398,141545647..141547111

Genome context

Sequence
000001 tggcacacgt ttgtagtccc agctacttgg gaagctcagg caggagaaac ttgaacccag gaggtagagt tcgcagtgag 000080
000081 tagagatcac actgctgcac tccaaagtga gactccatct caaaaaaaaa aaaaaaaaaG TAGAACTTTA CAAACACTAC 000160
000161 AGTGCATTTT CTAGAAAATT TTTTCTAggc cgggcgcggt ggctcacgcc tgactccgac tcaaaaaaaa aaaaaaaaga 000240
000241 aaaagaaaaa TTTTTCTAAA TCTCCATTGT TAAGAGATCA CTGTGAGGTA GGGTAGGGAG TGTGGGGAAA GATTGGGGCC 000320
000321 CCCAGGTTTG AAGATCAGCT TGGTCTTGCC TGTGTGCATG TATCTGATAA AATGCAGGAA AAGTTTGTCT CTTCCCCACC 000400
000401 CTCACTTCCA CCCACTGTGA GGCTTGCTCA TGTCCAGATT GGGCTCAGGA TGGCAGTTGT GGATGCTCAG AGCACAAAAG 000480
000481 GCTTCTTGTT TGCCCAAGGG CCTATCAGTG TTTAAATAGA ACTGGCGGAA GCACAAGCAC ACCGTATCAG CAGCTTATCA 000560
000561 GGGACCATGG TTTTCCACGT ACATTTGCTA GGCACTTCAG TTTACCCAAC TCCATCAGCA CTGAGTTAAA TTGCAAGGTT 000640
000641 GGGCTGTACT ACGCTGAGCC AGGGCAGGGA GAACAAGCCA GTTACTGGGG ATGAGGGTGT CGGGGGGGCC CTCAAGACCT 000720
000721 TATTTGCATT CTGCCCACAT AGAGAATAAA GCTGTGATAG CCTGTGTACT AAGAGGCACC CAAAGAGAAC CAGTCAGTCT 000800
000801 TAGGAATGCA CCCGGAAGGT GGGATGAGTC CAGGCCTCCC TATGGTGGAA GTAGTTGGAG ATACCTCTTG TTACCCTGGT 000880
000881 TTTCCATCTT AGTTTACCAG GTGTATAGTC AGTGCGGGTT ATGGTTAAAG GAGGTGTCAA TTGGGGGCCT GTTAATGTCT 000960
000961 TAAAATTGTA TGCAATTTTG GGGTTTGCAA ATGCGTCTGC GTGCATATTT CTCTGGCAGC TGACCTATGA ATCAAAGGAC 001040
001041 TAAATGTTCT TGTACTATTC GGGCTGCATC TTCTTTGAGG GTAATCTTCA GGGCAGATAC ATGGGTAGCC TACTTTAGAA 001120
001121 ATGAGGCCTT TGCAATTATA ATCActccta ctttctaagc acttgctata tgccaggtgc tgtgctaaat gctttataaa 001200
001201 tgttatcaca tttaattctc agaaaatctt atgagatagg aatttttatt tctaaaagag ttataatttg cccatgatca 001280
001281 cagagctaag taaatgatag agctatgatc ggaacttcaa ctttctgatt ccaTGTCTGT TAGCACTGTG GAAGGCTGTC 001360
001361 TTTGGCATTT TAATATACTT ATCAAGTGTT TCATATACAT TGGTTAATTT GTCCAACTGC CACAGAGTGG GATGGGTGGC 001440
001441 TCTTtttcct aaactgtagc catcttttcc ccaaagtgta gccttcatga attttgccct atttatatat cacctatgct 001520
001521 attaagttac ctaccattta aaatttttaa ttaaatgtgt tatttcttac cctcattcct aaataatagc catggaaaaa 001600
001601 ccattgatgt gctaattttt ttcttgaatc cacactaaaa taactacata accattaaaa tgaaaaatgc attagcc
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