Difference between revisions of "NONHSAT104505"

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sequence = <dnaseq>gggacaccagggtgaatacttacaggccctgttccccttccttcatgaaacAGCCTCCTTCGGGCTGGGTCACTGGGCACTGGGGCCTCCCTGGTCTTCCAGGATTGCAACTTCACAGAATCCCTTTTCCATAAGGCACATGAAAGTGACTGTGACCCGCAACGGGAGCCTTGACAACCAGCCAATTCagaacacagaccttgacatcggaaggccccgagttcaaatcctgccttgctccctttcagctggaaagctgtggtcaaattacttagcctctccaagccagttttcccttctgcaaaatgaggttacacaagctgccacctcacagaatgagtCTCACCCACGCCTCTCCAAGCCTCCCAACAGAAGACAGAGGTCCCCCACAGCCAGAGACATTTCCTGAAGACATGGGGAACACAGAGGCAGAAACAGCCCATCCACCCAGGAGCTGTCCCCCACACTGCCGGGAGCCGGCACCCAGAGCCGCCAGGTAAAACTGAGGCCACCTGGTTCAACATCACCTTTCACAGAAGGGGAAGCAGCCACAGAAAGAAGGGCCTCGTTAAGAAGTGGAACCTGGGACCCCCAAGCGGTGTCTCTCATCCTGACTGGGGATCCAGAGTAGGAGGGAGCCTTTGGTGGGACACAAAGGAACAGAACGAGGCACCAACAGCAAGGGGCAAGCAGATTCAAGGGCCACAGAGGAGATGGAGGCAAACACCTTCCCCTGGTCAGAGGCTGTGCCTCAGCCCTTCTCCCTGCATCAGTTTCTCCTTCAGAAGCATGGGACTACCTCCCATCTAGTTCTCGTTTCTAAACCTAGGGGAGATGCTATCTTTGCTGCAATAATCTTAGCCTACATCTTGGAATGGAAATGGCCTTGGTGGAAATGGTCTTCAACTCCTCTGGTCCAAGCTCAGGCCCTGTGACCCTGGAACAATCCCCTTCCTGGTCCTCCATGTAGGAGCAATAACATTCCCTTGCCAGCAGCACCAGCCATTCTGATGATTAAATGGTATCGGACTCtgttttccaaactcagtcattcagatgccccctattttatttcttccatgtctgcaaatgattataatatttttaaatgtaggatgagtcctttttattacacatagaaatagctactgtaaatagcaaactctaacactgtgcctaattaggaaataaaggtaaccataaatacagtaaaaatgaaacaatgttattatggtttaacctgatagtgtggcttgcaaggccctgggcctgaagcctgggcaataagtgagagttagaaaggtgtcaaagacatgatagcagcaaactgaggctttgtaccccacggtaaataggactgaaagcaaattcacagggagcaactGATCCATTCCACAACAGAATGCTCCCTGTCAATTCGCTTTCCATTCTGTTGTGTCCTGTCTCCCAGCAGAGACTACAAACTCCCCAAAACCACTTACCCACCAGCTGCACGTGAGAAGCCAAAGGTAGTTTATGTGAAAGGGCTTTGGAAATAATCACGCACCAAGTGAAGGCAGAGGACACACCTTGTCAGCTTAGTTCTCAGCAGCAAATCATCTCTTTTCCAGGATAACCCTCCCTGATTCTTATTGAAATCTCTTTGCTGACCACACTAAGCTCTTCTCTCTCAGGGGCAGTGGGAGCCGTGGAGAGTGGAATAGACCAGCTGTCTGTGACCTGCGAGGGAGTCCAATGTCGGAATCACTCCCCAGCCAAATGCACGGTTTTAAAAAATCTATTTATTTATT</dnaseq>|
 
sequence = <dnaseq>gggacaccagggtgaatacttacaggccctgttccccttccttcatgaaacAGCCTCCTTCGGGCTGGGTCACTGGGCACTGGGGCCTCCCTGGTCTTCCAGGATTGCAACTTCACAGAATCCCTTTTCCATAAGGCACATGAAAGTGACTGTGACCCGCAACGGGAGCCTTGACAACCAGCCAATTCagaacacagaccttgacatcggaaggccccgagttcaaatcctgccttgctccctttcagctggaaagctgtggtcaaattacttagcctctccaagccagttttcccttctgcaaaatgaggttacacaagctgccacctcacagaatgagtCTCACCCACGCCTCTCCAAGCCTCCCAACAGAAGACAGAGGTCCCCCACAGCCAGAGACATTTCCTGAAGACATGGGGAACACAGAGGCAGAAACAGCCCATCCACCCAGGAGCTGTCCCCCACACTGCCGGGAGCCGGCACCCAGAGCCGCCAGGTAAAACTGAGGCCACCTGGTTCAACATCACCTTTCACAGAAGGGGAAGCAGCCACAGAAAGAAGGGCCTCGTTAAGAAGTGGAACCTGGGACCCCCAAGCGGTGTCTCTCATCCTGACTGGGGATCCAGAGTAGGAGGGAGCCTTTGGTGGGACACAAAGGAACAGAACGAGGCACCAACAGCAAGGGGCAAGCAGATTCAAGGGCCACAGAGGAGATGGAGGCAAACACCTTCCCCTGGTCAGAGGCTGTGCCTCAGCCCTTCTCCCTGCATCAGTTTCTCCTTCAGAAGCATGGGACTACCTCCCATCTAGTTCTCGTTTCTAAACCTAGGGGAGATGCTATCTTTGCTGCAATAATCTTAGCCTACATCTTGGAATGGAAATGGCCTTGGTGGAAATGGTCTTCAACTCCTCTGGTCCAAGCTCAGGCCCTGTGACCCTGGAACAATCCCCTTCCTGGTCCTCCATGTAGGAGCAATAACATTCCCTTGCCAGCAGCACCAGCCATTCTGATGATTAAATGGTATCGGACTCtgttttccaaactcagtcattcagatgccccctattttatttcttccatgtctgcaaatgattataatatttttaaatgtaggatgagtcctttttattacacatagaaatagctactgtaaatagcaaactctaacactgtgcctaattaggaaataaaggtaaccataaatacagtaaaaatgaaacaatgttattatggtttaacctgatagtgtggcttgcaaggccctgggcctgaagcctgggcaataagtgagagttagaaaggtgtcaaagacatgatagcagcaaactgaggctttgtaccccacggtaaataggactgaaagcaaattcacagggagcaactGATCCATTCCACAACAGAATGCTCCCTGTCAATTCGCTTTCCATTCTGTTGTGTCCTGTCTCCCAGCAGAGACTACAAACTCCCCAAAACCACTTACCCACCAGCTGCACGTGAGAAGCCAAAGGTAGTTTATGTGAAAGGGCTTTGGAAATAATCACGCACCAAGTGAAGGCAGAGGACACACCTTGTCAGCTTAGTTCTCAGCAGCAAATCATCTCTTTTCCAGGATAACCCTCCCTGATTCTTATTGAAATCTCTTTGCTGACCACACTAAGCTCTTCTCTCTCAGGGGCAGTGGGAGCCGTGGAGAGTGGAATAGACCAGCTGTCTGTGACCTGCGAGGGAGTCCAATGTCGGAATCACTCCCCAGCCAAATGCACGGTTTTAAAAAATCTATTTATTTATT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG041903]]
+
[[Category:Intergenic]][[Category:NONHSAG041903]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 01:32, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT104505

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1790 nt

Genomic location

chr5+:148802862..148805800

Exon number

3

Exons

148802862..148803202,148803653..148803960,148804660..148805800

Genome context

Sequence
000001 gggacaccag ggtgaatact tacaggccct gttccccttc cttcatgaaa cAGCCTCCTT CGGGCTGGGT CACTGGGCAC 000080
000081 TGGGGCCTCC CTGGTCTTCC AGGATTGCAA CTTCACAGAA TCCCTTTTCC ATAAGGCACA TGAAAGTGAC TGTGACCCGC 000160
000161 AACGGGAGCC TTGACAACCA GCCAATTCag aacacagacc ttgacatcgg aaggccccga gttcaaatcc tgccttgctc 000240
000241 cctttcagct ggaaagctgt ggtcaaatta cttagcctct ccaagccagt tttcccttct gcaaaatgag gttacacaag 000320
000321 ctgccacctc acagaatgag tCTCACCCAC GCCTCTCCAA GCCTCCCAAC AGAAGACAGA GGTCCCCCAC AGCCAGAGAC 000400
000401 ATTTCCTGAA GACATGGGGA ACACAGAGGC AGAAACAGCC CATCCACCCA GGAGCTGTCC CCCACACTGC CGGGAGCCGG 000480
000481 CACCCAGAGC CGCCAGGTAA AACTGAGGCC ACCTGGTTCA ACATCACCTT TCACAGAAGG GGAAGCAGCC ACAGAAAGAA 000560
000561 GGGCCTCGTT AAGAAGTGGA ACCTGGGACC CCCAAGCGGT GTCTCTCATC CTGACTGGGG ATCCAGAGTA GGAGGGAGCC 000640
000641 TTTGGTGGGA CACAAAGGAA CAGAACGAGG CACCAACAGC AAGGGGCAAG CAGATTCAAG GGCCACAGAG GAGATGGAGG 000720
000721 CAAACACCTT CCCCTGGTCA GAGGCTGTGC CTCAGCCCTT CTCCCTGCAT CAGTTTCTCC TTCAGAAGCA TGGGACTACC 000800
000801 TCCCATCTAG TTCTCGTTTC TAAACCTAGG GGAGATGCTA TCTTTGCTGC AATAATCTTA GCCTACATCT TGGAATGGAA 000880
000881 ATGGCCTTGG TGGAAATGGT CTTCAACTCC TCTGGTCCAA GCTCAGGCCC TGTGACCCTG GAACAATCCC CTTCCTGGTC 000960
000961 CTCCATGTAG GAGCAATAAC ATTCCCTTGC CAGCAGCACC AGCCATTCTG ATGATTAAAT GGTATCGGAC TCtgttttcc 001040
001041 aaactcagtc attcagatgc cccctatttt atttcttcca tgtctgcaaa tgattataat atttttaaat gtaggatgag 001120
001121 tcctttttat tacacataga aatagctact gtaaatagca aactctaaca ctgtgcctaa ttaggaaata aaggtaacca 001200
001201 taaatacagt aaaaatgaaa caatgttatt atggtttaac ctgatagtgt ggcttgcaag gccctgggcc tgaagcctgg 001280
001281 gcaataagtg agagttagaa aggtgtcaaa gacatgatag cagcaaactg aggctttgta ccccacggta aataggactg 001360
001361 aaagcaaatt cacagggagc aactGATCCA TTCCACAACA GAATGCTCCC TGTCAATTCG CTTTCCATTC TGTTGTGTCC 001440
001441 TGTCTCCCAG CAGAGACTAC AAACTCCCCA AAACCACTTA CCCACCAGCT GCACGTGAGA AGCCAAAGGT AGTTTATGTG 001520
001521 AAAGGGCTTT GGAAATAATC ACGCACCAAG TGAAGGCAGA GGACACACCT TGTCAGCTTA GTTCTCAGCA GCAAATCATC 001600
001601 TCTTTTCCAG GATAACCCTC CCTGATTCTT ATTGAAATCT CTTTGCTGAC CACACTAAGC TCTTCTCTCT CAGGGGCAGT 001680
001681 GGGAGCCGTG GAGAGTGGAA TAGACCAGCT GTCTGTGACC TGCGAGGGAG TCCAATGTCG GAATCACTCC CCAGCCAAAT 001760
001761 GCACGGTTTT AAAAAATCTA TTTATTTATT
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