Difference between revisions of "ENST00000421976.2"

Latest revision as of 15:06, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000421976.2
Source	Gencode19
Same with	lnc-LBH-2:4,NONHSAT069908
Classification	intergenic
Length	2952 nt
Genomic location	chr2+:30569525..30575297
Exon number	2
Exons	30569525..30569981,30572803..30575297
Genome context
Sequence	000001 GCCTGAGCCA GAGGAAGGGA GGAAAACAAT AGCAAAAACC AGGACCCTTC GGACTTGCCG CTGAATGGGG ATTTTCGTCG 000080 000081 GATGTTGAGT TTACCTGGAA TGCCCCGGTG TTATTTTGGG AAGGCAGACA TCCCACGGAA ACAATGAAGT GGAAAAGAAA 000160 000161 ACAGCTAAAG CAAAATCTAG AGCCCAGTTT TTGCCAAACC AGCCCCACGT GGGCTGGGCA GGCTCTGGAA GCCCAAGTCA 000240 000241 GGCCGATGAA GAGCGGCTGA GGCCGTGGGG ATCTGGTTTA CCAGGAGGGC ACATGGAGGA TGCAAGAAAA GGAAGAGCCG 000320 000321 TATTCAAGTC CCCACTTCAG TGATGAGGCA GAAAGACCCT GCGCCTGACC ACGTGGGAAC AGCCTGCAGT GAGCGGTGAC 000400 000401 GCCGCCTGGC TTGAGCTAAG TGCTGGGCTC CACCATTCAT TGGCTGAGTG ACCTTAGATG AGAAGAGAAT GAGCCATGTG 000480 000481 TTTCCTGAAA CATCCAGTGG CCTCACCGGA GAATCTGCAA GAGCCGGTAA ACCCAGAAGC TTGGCCGTCC ATTCCTGGAA 000560 000561 GCAGACATTG TGTCTTCGTC CACCAAGCCC CTGGCTCTCA ACACTCACTG TGGTGGCAAG AACATGGCAC CTTGACCCTA 000640 000641 CACAGTTCTT CCATTTTTCA GAAGCAGGTG AGCACAGATT GCTGGGATGG AGTGAGTAAA AGATATAAAC TGGACTGGGC 000720 000721 ACGGTTGCTC GCACCTGTAA TCCCAGCACT TTGGGAGGCC GAAGCGGGCG GATCGCTTGA GCTCAGGAGT TCGAGATTAG 000800 000801 TCTAGGCAAC ATAGTGAGAA GCTATCTTAA AAAAAATTTA AATAAAAGTT ATAAACCAAG GCTTGGGGTT TCTGGGTGCT 000880 000881 TTGCCAGGAC CTGTTCTTGG GCAGAACTGA ATATATACTC AATTCTGAGG AGGGAAGAGG AAGGTCATGG CTAAAAGGTA 000960 000961 GGCTCTGAAA TCAGACTCCC GGAGCTCAAA TCCCAGCACT CTCTGCTTGC CACTTAGACT TCAGGTAGGG GAGGGGGATA 001040 001041 TAAATGTTTG AGCCTCAGTC CCCTCCTCTG TAAAATGGGG GCAGTAAATG TACTGCACAC AGCTGCAAGG TGTGAATGAG 001120 001121 GCGATGCACG TAAAACACAG TGCCTATAGT ATCACATTGG GGTTTTTTGG TGTTTTTTGT TTTTGTTTTT GTTTTTTTGA 001200 001201 CAGAGGGTCT CACTCTGTCA CCCAGGCTGG AGTGCAATGG AGTGATCTCA GCTCACTGCA GCCTTGACCT CCTGGGCTCA 001280 001281 ACCACTTTTC CCACCTCTGC CTTCAAAGTA GCTGGGACTA TAGCCATGTG CTACCACGCC CAGCTAATTT TTGCATTTTT 001360 001361 TTGTAGAGAT GGGGTTTCAC CATATTGCCC AGGCTGGTCT AGAACTCCTG AGCTCGAGTG ATCCACCCGC CTCGACCTCC 001440 001441 CAAAGTGCTG GGATTACAGA CGTGTGCCAC CATGCTCAGC CCCACACTCG TCTTTAAGAA AATTAAAATA AAATTGTTTT 001520 001521 AAACACAGTG TCTGGCACAG AATAGATGCT CAATAAACAC CAGCTGCTAC AATTAGAGGG GAAATCATCA TAATTGTTGG 001600 001601 ATTAAAACAT AATAAAAGAC CCCAGTTGCC TTGTTCAAGG CAGTATTTTC AGAAGCAAAG TTTTAAAAGT TTAAAAAGAG 001680 001681 GTCAGTATTT TAAGTCATGT CAGCTCCACA GCCACGGAAG TGCTGGAAAG GCACCAAGCC TCCTCTCGGT TTGCAGTGAA 001760 001761 ACGCTCCTCT TCCGTCTGAG GGCTATCGTT CCAGCAGAGA TCAACACAAT GGACTCTGGG ATGGACATTG TTCTCCAACA 001840 001841 GGCCTGGCCC TGGCCCAGCT GGGGTGAGCA TTTCCTTTGC AGCATTCCAA GAGGCGACAG TCCCAAAAGA TAATTAAAAA 001920 001921 TCAGCTAGCG GTGGTGACCA AGAGAAAGG

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GCCTGAGCCAGAGGAAGGGAGGAAAACAATAGCAAAAACCAGGACCCTTCGGACTTGCCGCTGAATGGGGATTTTCGTCGGATGTTGAGTTTACCTGGAATGCCCCGGTGTTATTTTGGGAAGGCAGACATCCCACGGAAACAATGAAGTGGAAAAGAAAACAGCTAAAGCAAAATCTAGAGCCCAGTTTTTGCCAAACCAGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGGCTGAGGCCGTGGGGATCTGGTTTACCAGGAGGGCACATGGAGGATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTGGGAACAGCCTGCAGTGAGCGGTGACGCCGCCTGGCTTGAGCTAAGTGCTGGGCTCCACCATTCATTGGCTGAGTGACCTTAGATGAGAAGAGAATGAGCCATGTGTTTCCTGAAACATCCAGTGGCCTCACCGGAGAATCTGCAAGAGCCGGTAAACCCAGAAGCTTGGCCGTCCATTCCTGGAAGCAGACATTGTGTCTTCGTCCACCAAGCCCCTGGCTCTCAACACTCACTGTGGTGGCAAGAACATGGCACCTTGACCCTACACAGTTCTTCCATTTTTCAGAAGCAGGTGAGCACAGATTGCTGGGATGGAGTGAGTAAAAGATATAAACTGGACTGGGCACGGTTGCTCGCACCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCGGATCGCTTGAGCTCAGGAGTTCGAGATTAGTCTAGGCAACATAGTGAGAAGCTATCTTAAAAAAAATTTAAATAAAAGTTATAAACCAAGGCTTGGGGTTTCTGGGTGCTTTGCCAGGACCTGTTCTTGGGCAGAACTGAATATATACTCAATTCTGAGGAGGGAAGAGGAAGGTCATGGCTAAAAGGTAGGCTCTGAAATCAGACTCCCGGAGCTCAAATCCCAGCACTCTCTGCTTGCCACTTAGACTTCAGGTAGGGGAGGGGGATATAAATGTTTGAGCCTCAGTCCCCTCCTCTGTAAAATGGGGGCAGTAAATGTACTGCACACAGCTGCAAGGTGTGAATGAGGCGATGCACGTAAAACACAGTGCCTATAGTATCACATTGGGGTTTTTTGGTGTTTTTTGTTTTTGTTTTTGTTTTTTTGACAGAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAATGGAGTGATCTCAGCTCACTGCAGCCTTGACCTCCTGGGCTCAACCACTTTTCCCACCTCTGCCTTCAAAGTAGCTGGGACTATAGCCATGTGCTACCACGCCCAGCTAATTTTTGCATTTTTTTGTAGAGATGGGGTTTCACCATATTGCCCAGGCTGGTCTAGAACTCCTGAGCTCGAGTGATCCACCCGCCTCGACCTCCCAAAGTGCTGGGATTACAGACGTGTGCCACCATGCTCAGCCCCACACTCGTCTTTAAGAAAATTAAAATAAAATTGTTTTAAACACAGTGTCTGGCACAGAATAGATGCTCAATAAACACCAGCTGCTACAATTAGAGGGGAAATCATCATAATTGTTGGATTAAAACATAATAAAAGACCCCAGTTGCCTTGTTCAAGGCAGTATTTTCAGAAGCAAAGTTTTAAAAGTTTAAAAAGAGGTCAGTATTTTAAGTCATGTCAGCTCCACAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTTCTCCAACAGGCCTGGCCCTGGCCCAGCTGGGGTGAGCATTTCCTTTGCAGCATTCCAAGAGGCGACAGTCCCAAAAGATAATTAAAAATCAGCTAGCGGTGGTGACCAAGAGAAAGGCACTGAGCCCTCCGAGTGTGGAGATAGGGCATCCCGGGTTATTAATTAAGTGTGCTCACATTTGCATGGTGTAGAGGACAATTATCAAGCTGGAGCTGTCAGCTTTAAATGCTGTTTGCATTTCTGGATGACTTTTTGGCGAAGAGGGTCAGGGAGGCTCTCTAAAGTCATTTTTGGGAGTCTGGAGGAATAGTTAGCAATTCGCACTTCACCTCGTTTTACCCTGCAACTCCATGGAAATTCCAGAAAGTCTTGGTTTTAATGGTCTCTTGCATAGGCCCATGACATGGGTCATCTCTCTCCTACCTCCTTCCATGCTGAACAAATGGAAAGGCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAACCAGACAGAGAGAGGAGAGGTAAGGGGTGAGGATGTGATTGATTTCCATCCTCGGCCCTCCAAGGAGGAGGCTGCCAAAGAAAACAAAGGCCACTGCAGGGGGGCAGCTCGTGGTGACAACCTGCACTGGGGCCGGAGGGCAGCCAGCATGGCACCTGGATCTGATCAAGATGAAGTTTTCATCCCCATCTGCCTGTTAATGTCTTCTTTACCAGTTGCCACCCCCTAATAAGGGGTATGCCGTAGACTGGAAGTCACTAGGGACCTGCCCAGCATCCTGTTCTAGGCATTGACTAATCCACTCTCCTACATCCTGCCTCCCATCCACATGGTCCAATCAGAGGCTGCCATGCTTGCACAATGTGACACTGTCTCTATGGACACATTAATTGGTCCTGATGTAGAACTTGACCCAAGATCAGGGTCAAGTTGAGAGAAGACTTATTTTCTTTCCAGGTGTTTCAATAACATGTAAAACTTGGAATTCGATAGCAGCCATCTTCTGCCATGAGAATTGGGAAGAGAGAAAGCCTATAGTGATAATAAAGTCAAATTATCCTAAACGCTAA</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-LBH-2]][[Category:NONHSAG027390]]
+[[Category:Intergenic]][[Category:lnc-LBH-2]][[Category:NONHSAG027390]][[Category:ENSG00000235997.2]][[Category:Transcripts]]