Difference between revisions of "Lnc-HIVEP2-5:2"
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sequence = <dnaseq>CAGCCCCTAGAAACCTGCCCTTCTCTGGCAGGGTTAGGGCTGAGACTGGGCCCTCAGACCATTTGGAATGACCAGTGATTTCAGCTCTCACTCCCTTCTCATCAGCACGTGTCTACAGTTGCAAAAAATTATGCAGAAGAGCAGATCAGATTGACGCAGTTTGATAAGGATTCAGCCCACCATTGCTGACTTTGAAGATGAAGGAGAGGGACCATGAGCCACAGAAAACCAGCAGCCTCTAGGAACTGGAAAAAGCAAGGAAATGGATTTTCCCCTAGAGCTTCATCCTCCCTCCCAGCACAAGGTCTTAGCACTGTTTCATCTTCCCAGAAGGCTTTTCCCTCTTCCACCCTGCTTCTAGTCCCAATATCATCACCAGATGAGAATATGTATGGATTCATGAACAAGAAAATTGCTTAACCATTTGATCAAGAGAGATTGGAAAATCAAGATGAAGCAGGTCTGGGTGAAAGAGCTGTGAATGGATTAATGGAACAGAAAGGAGGTGTGGAGATCCTTCTATTACATGTTAATGATCACCAGGGAACATCCACTACAATAGAACATCCCACTAAATCACCAGTAGACACAAGAGAATATGTGGCCAGTTGACTTTGGCCAGCCTCTGTCATTAGATGTCAATGTTCAAACAACGGTACATGAATGGCATAGCCCTGGTAGCAGGAGTGGGGGCTATGCATGGATCCAGCAATACACACTCCCACTCCACAACATTGACCCAGCCACCAAGGCTGACAAAATATTCAACCTTCCAGCAACAGAAACCAAGGATGACCCTTATCCCTGCCCAGGTATGGTATTAGCCCTTGAGACTAACCAGCCATGTGGTGGGAAGTTGAATATCTTCTACCCTGGAAAGGTCATTGATTCATTTTAGTATGAATTAATTCATGTTTCTGGGTTGGATTTGCTGTTCTTGCCTGCAGGGCCTCAGCTGGCACCAGCATCTAAAGGCTTAGAGAGTTAGTGATCCACCAACATGGCATCTCACATAACATCCCATCAAACCAAGTGACCCACTTTACTAGAAATGAGGTGCACGAGTGGACAAGCTCCAGCTTGACCCAAGTGGAACAAGCTCTACTAGTCCCATCAGATCATGCACCATCCAGAAGCTGCCACACTAACAGAGTGATGGAAAGGCCTGTTGAAGGCATAGTGGATGAGCCACACCATTGCAAGGTAATGTCATCGGAGGTTTATTTAGCATGTGTATTACACCCAGAAGAATGGTGTCCCATCCTTGCAAGGTAATGTCATCATCAGATTCTCCTGGGTGTAATATACATGCTAAACAAACAATCATTATATGATGCTGTGTCCCCAAGAGGTAAAATATGTGGGAGCTAAGGAGTGGAAGCAGCAATAGCCTCACTTACCATCAATACAATTGACTCCTTAGGGAACTTGTGCCTAGGCTCTGTGGGTTTAGAGGTCCTGGTGCCCAAAGGAGATGTGCTTCCATCAGGGAATACAACAAGCATTCAATTGAACATGAGGTTAAGGCTGCCACTTGGGAGCATCAGGCTCCTCATGCCAAGAGATCACCAAGCAAAAAGAGGAATCACCGTACCATGAGCATTAATCAATCCCATTCTTCAGAAGGAGATGGGACTGCTGACACAAGGCCACAGAGAGGCCCCCAGATAACTTGCCTGGGTGTCCCTTAGAATTCCCTTGCCCATTTTTTAATAATAGATGGATAAATGCAACAGTCTCCACCTAACAAAGGCATAATGATGGGACTTCTCAAGAGTGAGAAGCTAGGTCATTCCACCAGCCAAGTAGACCAGCAGAGGTACCAAAAAGAGACAGGAAATCTAGACTGTAAAGTAAAACAGGAAGATTCCCCAGGAACAGAAGCCAACTGTGATCCTAGAGGAGCTTCTCCTTAACATGCAGAAAGAAGTGGATCCATGAAGCACAAGAGCTGAGCTGTCATGGAAACTGCACATCTCAAATTTCCCATCAGGACTGAAGGACCTAGTCCCCCACAGGCTGAAGACAGTCACCTTACCCAACTTCATGCTCTCTTCCAGGGGCAGCCTGCATCCAACAACTTGTCAGCACAGGACTATAAAGGCCTTACCCTTTGCCTCTGTGAAGCATCCCACAGAGAGGTGCATCCACCTCTGAAGGTACATCCCAGCTTCAGGCTCCCAGTCACTTTGGGCTTACCCAGCCTCTTCGTCTGCCCTGCTTTTCTCCCTCCCCTTCCTTCCTGCAGGTTTGGATCCTGAGAGCACTCCCTAATAAACCTCATGCCCAC</dnaseq>| | sequence = <dnaseq>CAGCCCCTAGAAACCTGCCCTTCTCTGGCAGGGTTAGGGCTGAGACTGGGCCCTCAGACCATTTGGAATGACCAGTGATTTCAGCTCTCACTCCCTTCTCATCAGCACGTGTCTACAGTTGCAAAAAATTATGCAGAAGAGCAGATCAGATTGACGCAGTTTGATAAGGATTCAGCCCACCATTGCTGACTTTGAAGATGAAGGAGAGGGACCATGAGCCACAGAAAACCAGCAGCCTCTAGGAACTGGAAAAAGCAAGGAAATGGATTTTCCCCTAGAGCTTCATCCTCCCTCCCAGCACAAGGTCTTAGCACTGTTTCATCTTCCCAGAAGGCTTTTCCCTCTTCCACCCTGCTTCTAGTCCCAATATCATCACCAGATGAGAATATGTATGGATTCATGAACAAGAAAATTGCTTAACCATTTGATCAAGAGAGATTGGAAAATCAAGATGAAGCAGGTCTGGGTGAAAGAGCTGTGAATGGATTAATGGAACAGAAAGGAGGTGTGGAGATCCTTCTATTACATGTTAATGATCACCAGGGAACATCCACTACAATAGAACATCCCACTAAATCACCAGTAGACACAAGAGAATATGTGGCCAGTTGACTTTGGCCAGCCTCTGTCATTAGATGTCAATGTTCAAACAACGGTACATGAATGGCATAGCCCTGGTAGCAGGAGTGGGGGCTATGCATGGATCCAGCAATACACACTCCCACTCCACAACATTGACCCAGCCACCAAGGCTGACAAAATATTCAACCTTCCAGCAACAGAAACCAAGGATGACCCTTATCCCTGCCCAGGTATGGTATTAGCCCTTGAGACTAACCAGCCATGTGGTGGGAAGTTGAATATCTTCTACCCTGGAAAGGTCATTGATTCATTTTAGTATGAATTAATTCATGTTTCTGGGTTGGATTTGCTGTTCTTGCCTGCAGGGCCTCAGCTGGCACCAGCATCTAAAGGCTTAGAGAGTTAGTGATCCACCAACATGGCATCTCACATAACATCCCATCAAACCAAGTGACCCACTTTACTAGAAATGAGGTGCACGAGTGGACAAGCTCCAGCTTGACCCAAGTGGAACAAGCTCTACTAGTCCCATCAGATCATGCACCATCCAGAAGCTGCCACACTAACAGAGTGATGGAAAGGCCTGTTGAAGGCATAGTGGATGAGCCACACCATTGCAAGGTAATGTCATCGGAGGTTTATTTAGCATGTGTATTACACCCAGAAGAATGGTGTCCCATCCTTGCAAGGTAATGTCATCATCAGATTCTCCTGGGTGTAATATACATGCTAAACAAACAATCATTATATGATGCTGTGTCCCCAAGAGGTAAAATATGTGGGAGCTAAGGAGTGGAAGCAGCAATAGCCTCACTTACCATCAATACAATTGACTCCTTAGGGAACTTGTGCCTAGGCTCTGTGGGTTTAGAGGTCCTGGTGCCCAAAGGAGATGTGCTTCCATCAGGGAATACAACAAGCATTCAATTGAACATGAGGTTAAGGCTGCCACTTGGGAGCATCAGGCTCCTCATGCCAAGAGATCACCAAGCAAAAAGAGGAATCACCGTACCATGAGCATTAATCAATCCCATTCTTCAGAAGGAGATGGGACTGCTGACACAAGGCCACAGAGAGGCCCCCAGATAACTTGCCTGGGTGTCCCTTAGAATTCCCTTGCCCATTTTTTAATAATAGATGGATAAATGCAACAGTCTCCACCTAACAAAGGCATAATGATGGGACTTCTCAAGAGTGAGAAGCTAGGTCATTCCACCAGCCAAGTAGACCAGCAGAGGTACCAAAAAGAGACAGGAAATCTAGACTGTAAAGTAAAACAGGAAGATTCCCCAGGAACAGAAGCCAACTGTGATCCTAGAGGAGCTTCTCCTTAACATGCAGAAAGAAGTGGATCCATGAAGCACAAGAGCTGAGCTGTCATGGAAACTGCACATCTCAAATTTCCCATCAGGACTGAAGGACCTAGTCCCCCACAGGCTGAAGACAGTCACCTTACCCAACTTCATGCTCTCTTCCAGGGGCAGCCTGCATCCAACAACTTGTCAGCACAGGACTATAAAGGCCTTACCCTTTGCCTCTGTGAAGCATCCCACAGAGAGGTGCATCCACCTCTGAAGGTACATCCCAGCTTCAGGCTCCCAGTCACTTTGGGCTTACCCAGCCTCTTCGTCTGCCCTGCTTTTCTCCCTCCCCTTCCTTCCTGCAGGTTTGGATCCTGAGAGCACTCCCTAATAAACCTCATGCCCAC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-HIVEP2-5]] | + | [[Category:Intergenic]][[Category:lnc-HIVEP2-5]][[Category:NONHSAG045024]][[Category:Transcripts]] |
Latest revision as of 04:25, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-HIVEP2-5:2 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT115315 |
Classification |
intergenic |
Length |
2290 nt |
Genomic location |
chr6-:142847592..142958973 |
Exon number |
3 |
Exons |
142847592..142849520,142917437..142917673,142958850..142958973 |
Genome context |
|
Sequence |
000001 CAGCCCCTAG AAACCTGCCC TTCTCTGGCA GGGTTAGGGC TGAGACTGGG CCCTCAGACC ATTTGGAATG ACCAGTGATT 000080 000081 TCAGCTCTCA CTCCCTTCTC ATCAGCACGT GTCTACAGTT GCAAAAAATT ATGCAGAAGA GCAGATCAGA TTGACGCAGT 000160 000161 TTGATAAGGA TTCAGCCCAC CATTGCTGAC TTTGAAGATG AAGGAGAGGG ACCATGAGCC ACAGAAAACC AGCAGCCTCT 000240 000241 AGGAACTGGA AAAAGCAAGG AAATGGATTT TCCCCTAGAG CTTCATCCTC CCTCCCAGCA CAAGGTCTTA GCACTGTTTC 000320 000321 ATCTTCCCAG AAGGCTTTTC CCTCTTCCAC CCTGCTTCTA GTCCCAATAT CATCACCAGA TGAGAATATG TATGGATTCA 000400 000401 TGAACAAGAA AATTGCTTAA CCATTTGATC AAGAGAGATT GGAAAATCAA GATGAAGCAG GTCTGGGTGA AAGAGCTGTG 000480 000481 AATGGATTAA TGGAACAGAA AGGAGGTGTG GAGATCCTTC TATTACATGT TAATGATCAC CAGGGAACAT CCACTACAAT 000560 000561 AGAACATCCC ACTAAATCAC CAGTAGACAC AAGAGAATAT GTGGCCAGTT GACTTTGGCC AGCCTCTGTC ATTAGATGTC 000640 000641 AATGTTCAAA CAACGGTACA TGAATGGCAT AGCCCTGGTA GCAGGAGTGG GGGCTATGCA TGGATCCAGC AATACACACT 000720 000721 CCCACTCCAC AACATTGACC CAGCCACCAA GGCTGACAAA ATATTCAACC TTCCAGCAAC AGAAACCAAG GATGACCCTT 000800 000801 ATCCCTGCCC AGGTATGGTA TTAGCCCTTG AGACTAACCA GCCATGTGGT GGGAAGTTGA ATATCTTCTA CCCTGGAAAG 000880 000881 GTCATTGATT CATTTTAGTA TGAATTAATT CATGTTTCTG GGTTGGATTT GCTGTTCTTG CCTGCAGGGC CTCAGCTGGC 000960 000961 ACCAGCATCT AAAGGCTTAG AGAGTTAGTG ATCCACCAAC ATGGCATCTC ACATAACATC CCATCAAACC AAGTGACCCA 001040 001041 CTTTACTAGA AATGAGGTGC ACGAGTGGAC AAGCTCCAGC TTGACCCAAG TGGAACAAGC TCTACTAGTC CCATCAGATC 001120 001121 ATGCACCATC CAGAAGCTGC CACACTAACA GAGTGATGGA AAGGCCTGTT GAAGGCATAG TGGATGAGCC ACACCATTGC 001200 001201 AAGGTAATGT CATCGGAGGT TTATTTAGCA TGTGTATTAC ACCCAGAAGA ATGGTGTCCC ATCCTTGCAA GGTAATGTCA 001280 001281 TCATCAGATT CTCCTGGGTG TAATATACAT GCTAAACAAA CAATCATTAT ATGATGCTGT GTCCCCAAGA GGTAAAATAT 001360 001361 GTGGGAGCTA AGGAGTGGAA GCAGCAATAG CCTCACTTAC CATCAATACA ATTGACTCCT TAGGGAACTT GTGCCTAGGC 001440 001441 TCTGTGGGTT TAGAGGTCCT GGTGCCCAAA GGAGATGTGC TTCCATCAGG GAATACAACA AGCATTCAAT TGAACATGAG 001520 001521 GTTAAGGCTG CCACTTGGGA GCATCAGGCT CCTCATGCCA AGAGATCACC AAGCAAAAAG AGGAATCACC GTACCATGAG 001600 001601 CATTAATCAA TCCCATTCTT CAGAAGGAGA TGGGACTGCT GACACAAGGC CACAGAGAGG CCCCCAGATA ACTTGCCTGG 001680 001681 GTGTCCCTTA GAATTCCCTT GCCCATTTTT TAATAATAGA TGGATAAATG CAACAGTCTC CACCTAACAA AGGCATAATG 001760 001761 ATGGGACTTC TCAAGAGTGA GAAGCTAGGT CATTCCACCA GCCAAGTAGA CCAGCAGAGG TACCAAAAAG AGACAGGAAA 001840 001841 TCTAGACTGT AAAGTAAAAC AGGAAGATTC CCCAGGAACA GAAGCCAACT GTGATCCTAG AGGAGCTTCT CCTTAACATG 001920 001921 CAGAAAGAAG TGGATCCATG AAGCACAAGA GCTGAGCTGT CATGGAAACT GCACATCTCA AATTTCCCAT C |