Difference between revisions of "Lnc-CIDEA-2:2"

Latest revision as of 03:57, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-CIDEA-2:2
Source	LNCipedia2.1
Same with	NONHSAT058356
Classification	intergenic
Length	2242 nt
Genomic location	chr18+:12218590..12224800
Exon number	2
Exons	12218590..12218829,12222799..12224800
Genome context
Sequence	000001 CAATTATGAC CTCTCCTATT TCCTCAAATC TCTGATTCGT TCTTGCTTCT AATGCAGGAT ACCCTCTGAG GTCAAATCAT 000080 000081 TGGGCTTGTG GCCATGAGAC CACAGACTTT GCCTAGCTTC CAGTGACTGT CCGAGATGAC CTGTGGAGTG CACCGCCTGT 000160 000161 ACTTGGACAT CACTGTCTTT TCCGATCCAT ACCCGTCATC CTTGGAATTT CCCCTGCATC CAAACCTGTT CCTGATACAG 000240 000241 ATAACCCTAA GGAATATCTT GGATGTCTTC ACGGGGCTTA TGACTTATTC TGAGGTTTAC AAAATAGAGG CCCCCAGCTG 000320 000321 AGCAAAGAGA GGGCTGCAGC GCCGAGGGAA CAGCTGCCGG ACTCACCGGA GAGGCCTCCT GGAGCACGCC GGGACCCCCT 000400 000401 CCACCCCCTG GCTTTGGCTG CATCCATGGC TAGTTTGCCT GAACTATATC TGAGCCACTG AGAGTATTTA TTAAGCAGAG 000480 000481 AATAATTTTG AGTTTCACTT TTATAACTTT TGTTTCAAAA GTTGTTTTGG ATAATTTAAT GAAATGACTG TAAACCAGAA 000560 000561 TTCCCCTTTT CATTATTTCT TTGTGTCGAT ATAAAAAGAG TTGATGATTT TAAAAGCCAG TGAGATGTCC CTGTCTGTGG 000640 000641 ATGTCAGCGG GAGCGTGGGG TCTGAAGCCT TTCTCTGGTG GCTGTCCAGG AAGATTGCCC CAGCTTGCAC TCCCTTTTGG 000720 000721 CGGGTTCCAG AGCCTTCCAT TTGAAAGGAG CATCTCTCCC CACTCTGCCC CACCCAGCAC CAGCTCTTCT GGAACCCACT 000800 000801 GACTTCCTAA ACACTTTCTT CCTCCTTCAC CTCATTGAAT TCAAGACTTT AGAAAACAGC CAAAAACTCT AGAGGTGGGG 000880 000881 GTGGGTGTGA TCTGGAAATC CCTGCTGTAA TCTTTTTAAG GGAATCCACT GGAAATTATT AATTTATGTT TTAAATAAAA 000960 000961 CCATTCCTTA CTTCACAGAA TATTAAGCCA CTCACTTTTT AACAGAACTT TGAGATATAA TTAAAATGCC GTAAATTTCA 001040 001041 CCCCCACACA GTGTACAGTT CCAAGGTTTC CAATATAGTC ACAGAAGTCT CTGCAACAAT TACCACAATT TTAGACATGA 001120 001121 AGACCATTTG TTGGCAGCCC TACCTGTATC TATGTGTATA TATATAATTT TAATATTGGA TTAGATGTTA TAGTATTTAA 001200 001201 TATTGTACTG TTACCTATTT GTGTCTTTAT ATTGCTGTTT TTTATTCAGG TGAATAATAA TTATCTCCAT ATAGTCATAC 001280 001281 ATTTATATAG GGTTAAAACA TACCTTTTTA CAATTCAATA AATTAAATTG GCCAGGCGTG GTGGCTCATG CCTGTAATCC 001360 001361 CAGCACTTTG GGAGGCCGAG GGGGGCGGAT CACCTGAGGT TGGGGGTTCG AGACCAGCCT GACCAACATG GAGAAACCCT 001440 001441 GTCTGTACTA AAAATACAAA AAATTAGCCG GGTGTGGTGG CTCATGCCTG TAATCCCAGC TACTTGGGAG GCTGAGGCAG 001520 001521 GAGAATCACT AGAACCCAGG AGGCGGACGT TGCGGTAAGC CGGGATCGCA CCATTGCACT CCAGCCTGGG CAACAAGACC 001600 001601 AAAACTCCAT CTCAAGAAAA AAAAAAAAAA AAAAAGAAAG TAAATTGTTT TTAATTACTC ACATAAGAAA CACATGTGTT 001680 001681 ATTGTTATAA AAATTCACAT AGTGCTTAGG TCTACAGAAT AAACGTATCC CCGCCACCTC CCAGCCCACC CCCTCGTCTG 001760 001761 CATTCACCTA CACACAGTTA AACATGCACA TATGTTTCCG TGACACGATC TTGTTTGCAT ATTGTTCACT GATTTGCTTT 001840 001841 TCCATATAAG ATTTAATTTG GTGATTATTG CTTATCAGTA CCTATAGGTC TCTCTCATTA TTATTTATAA TTACATCATT 001920 001921 ATTCCATAGG GTATTTTACC ATAATTTGGT CACTTTTTCA CTGAGGAATT TTTATGTCAG TTTCAGTTAT TTGTTATTGT 002000 002001 T

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CAATTATGACCTCTCCTATTTCCTCAAATCTCTGATTCGTTCTTGCTTCTAATGCAGGATACCCTCTGAGGTCAAATCATTGGGCTTGTGGCCATGAGACCACAGACTTTGCCTAGCTTCCAGTGACTGTCCGAGATGACCTGTGGAGTGCACCGCCTGTACTTGGACATCACTGTCTTTTCCGATCCATACCCGTCATCCTTGGAATTTCCCCTGCATCCAAACCTGTTCCTGATACAGATAACCCTAAGGAATATCTTGGATGTCTTCACGGGGCTTATGACTTATTCTGAGGTTTACAAAATAGAGGCCCCCAGCTGAGCAAAGAGAGGGCTGCAGCGCCGAGGGAACAGCTGCCGGACTCACCGGAGAGGCCTCCTGGAGCACGCCGGGACCCCCTCCACCCCCTGGCTTTGGCTGCATCCATGGCTAGTTTGCCTGAACTATATCTGAGCCACTGAGAGTATTTATTAAGCAGAGAATAATTTTGAGTTTCACTTTTATAACTTTTGTTTCAAAAGTTGTTTTGGATAATTTAATGAAATGACTGTAAACCAGAATTCCCCTTTTCATTATTTCTTTGTGTCGATATAAAAAGAGTTGATGATTTTAAAAGCCAGTGAGATGTCCCTGTCTGTGGATGTCAGCGGGAGCGTGGGGTCTGAAGCCTTTCTCTGGTGGCTGTCCAGGAAGATTGCCCCAGCTTGCACTCCCTTTTGGCGGGTTCCAGAGCCTTCCATTTGAAAGGAGCATCTCTCCCCACTCTGCCCCACCCAGCACCAGCTCTTCTGGAACCCACTGACTTCCTAAACACTTTCTTCCTCCTTCACCTCATTGAATTCAAGACTTTAGAAAACAGCCAAAAACTCTAGAGGTGGGGGTGGGTGTGATCTGGAAATCCCTGCTGTAATCTTTTTAAGGGAATCCACTGGAAATTATTAATTTATGTTTTAAATAAAACCATTCCTTACTTCACAGAATATTAAGCCACTCACTTTTTAACAGAACTTTGAGATATAATTAAAATGCCGTAAATTTCACCCCCACACAGTGTACAGTTCCAAGGTTTCCAATATAGTCACAGAAGTCTCTGCAACAATTACCACAATTTTAGACATGAAGACCATTTGTTGGCAGCCCTACCTGTATCTATGTGTATATATATAATTTTAATATTGGATTAGATGTTATAGTATTTAATATTGTACTGTTACCTATTTGTGTCTTTATATTGCTGTTTTTTATTCAGGTGAATAATAATTATCTCCATATAGTCATACATTTATATAGGGTTAAAACATACCTTTTTACAATTCAATAAATTAAATTGGCCAGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGGGGGCGGATCACCTGAGGTTGGGGGTTCGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTGTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTAGAACCCAGGAGGCGGACGTTGCGGTAAGCCGGGATCGCACCATTGCACTCCAGCCTGGGCAACAAGACCAAAACTCCATCTCAAGAAAAAAAAAAAAAAAAAAAGAAAGTAAATTGTTTTTAATTACTCACATAAGAAACACATGTGTTATTGTTATAAAAATTCACATAGTGCTTAGGTCTACAGAATAAACGTATCCCCGCCACCTCCCAGCCCACCCCCTCGTCTGCATTCACCTACACACAGTTAAACATGCACATATGTTTCCGTGACACGATCTTGTTTGCATATTGTTCACTGATTTGCTTTTCCATATAAGATTTAATTTGGTGATTATTGCTTATCAGTACCTATAGGTCTCTCTCATTATTATTTATAATTACATCATTATTCCATAGGGTATTTTACCATAATTTGGTCACTTTTTCACTGAGGAATTTTTATGTCAGTTTCAGTTATTTGTTATTGTTACCAATGCTGTACTGGGCATCCCTGTATATCCACCTTTTTGTTGCATTAGTTAAGTGGTTTTTTCCTTTTATGATTGATTTCTAAAAATAAAATACTGCAGCAAATGTTAATGTTTAATATTTTCATAAAATTAAAAATCTGTGTTCCAAAAAGAAATCAATGGTTTATACTTCTACCATCAGTGTATGAGAATTCCTATTTCCCCACACCCTTAATTACACAGGAAATTATCAATGTTTG</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-CIDEA-2]][[Category:NONHSAG023390]]
+[[Category:Intergenic]][[Category:lnc-CIDEA-2]][[Category:NONHSAG023390]][[Category:Transcripts]]