Difference between revisions of "ENST00000436786.1"

Latest revision as of 15:34, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000436786.1
Source	Gencode19
Same with	lnc-DMRTA1-2:1,NONHSAT130442
Classification	intergenic
Length	2347 nt
Genomic location	chr9+:22646199..22824212
Exon number	6
Exons	22646199..22646295,22674442..22674642,22682609..22682712,22723308..22723429,22820737..22821597,22823251..22824212
Genome context
Sequence	000001 CTTTTATTTT CTGTTCCTCT AAGGGAAGAG AGACCAAAGA GAATTCTACT TTGACCCTGG CTTAAGAGTG GAACATAGAT 000080 000081 GTCTATAAAA CTATGTGGTA CCAGCATGTT ATGAAGAATA AGCAAGAAGA AAGAGAAGGA GAAGAAGCAG GAGGAGGAGG 000160 000161 AGAGAAGGAA AGGGAGGAGG AGGAGGAGAA AAAGATGGTG GTAGAGGAGG AGGAGAAGAA GAAGAAGGAG GAGAAGGAGA 000240 000241 AGGAGAAGAA GGAGCAGGAG GAGGAGGAAG AAGAAGAAGA GGAGAAGGGA ACTCACATGC TACCTGTGTG AGTCACATGT 000320 000321 CAGTGCAATT TCTGGAGGTC AATTGTAGCC CTGAAGTCTC AGAACAATGG CAAAAAGAAA TACGGAGGGC ATGATACATT 000400 000401 TGGCAGACTA AAATTCTCAA GATTCCTATG CAGTCGAGTT TTACCATATG ACTGAGTTCC AACAAAGAAA TATGAGTAGA 000480 000481 AGATTGTATA AGCATCATTT TTGACCCAGG GCTTTAAGAA GCAGACTATG GAAATGATGT TAGACAAAAA GCAAATTTGA 000560 000561 GCAATTTTGT TATTCGGGTT CAAAATGGGT CGTAAAGCAG CAGAGACAAC TCTCAAAACA TCAGCAACAC ATTTGGCGCG 000640 000641 GGAACTGCTA ATGAACGTAC AGTGGAGTGG TGGTTCAAGA AGTTTTGCGA AGGAAACGAG AGGCTTGAAG ACGAAGAGTG 000720 000721 TAGTGGCCAG CCATTGGAAG TAGACAACGA CAAATTGAGA GCAATCATTG AAGCTGATCC TCTTACAACT ACAGGAGAAG 000800 000801 TTGCCAAGGA ACTCACCATC AATCATTCTA TAGTAGTTTG GCATTTGAAG CAGATCGGAA AGGTGAAAAA GCTTGATAAG 000880 000881 TGAATGCCTC ATGAACAGAG CAAAAATTTT AAAACATTGT TGTTTTGAAG TGACGTCTTC TCTTATTTTA CACAACAATG 000960 000961 AACCATTTCT GGATCGAATT ATGACATGTG ATGAAAAGTG GATTTTATAT GACAAGCTGC AAAAACCAGC TCAGTGGTTG 001040 001041 GATGGAGAAG AAGCTTCAAA GCACTTCCCA AAGCTGAACT TGCACCAACA AAAGCTCATG GTCACAATTT GGTGGTCTGC 001120 001121 CGCCAGCCTG ATCTACTACA GCTTTCGGAA TCCCAGCGAA ACCATTATGT CTGAGAAATA TGCTCAGCAA ATCGATGAGA 001200 001201 TGTGCCAAAA ACTTCAAGGC CTGCAGCCGG CATTGGTCAA CCAAAAGGAT CCAATTCTTC TCTACCACAA CGCCTGACCA 001280 001281 CATGTCACAT AACCAACCCT TCAAAAGTTG AATAAATTGG TCTACAAAAT TGCCTTATCT GCCATATTCA CCTGACCTCT 001360 001361 CACCAACCAA CTACCACTTC TTCAGTTTGT CTCTTCCAGA ATCAAAGCTA TAAAACTACA AATGGTTCTC CAAATGGAGC 001440 001441 CCCAGATGCA GTCCATGACT AAGATCTACT GCGGACCTCT GGACCGGCCT GCTAGCCCAG CTCCCACATT AATGACATCA 001520 001521 AAGGCACCCC TCCCGAGGAA ATCTCAACTG CATGACACCT ACTACGCCCC AATTCAGCAG GAAGCAGTTA GAGTGGTCGT 001600 001601 TGGCCAACCT CCCCAACAGC ACTTGGGTTT TCTGTTGAGA TGGGGGACTG AGAGACAGGA CTAGCTGGAT TTCCTAGGCC 001680 001681 AACTAAGAAT CCCTAAGCCT AGCTGGGAAG GTGACTACAC CCACCTTTAA CCACTAGGCT TGCAACTTAG CTCACACCCG 001760 001761 ACCAATCAGG TAGTAAAGAG AGCTTGCTAA AATGCTAATT AGGCAAAAAC AGGAGGTAAA GAAATAGCCA GTCATCTATC 001840 001841 GCCTGACAGC ACAAGGGGCG GGACAATGAT CAGGATATAA ACTCAGGCAT TCAAGCCAGC AATGGCTACC CACTTTGGGT 001920 001921 CCCCTCCCAT TTTATGGGAG CTCTGTTTTC ACTCTATTAA ATCTTTCAAC TACCAAAAAA AA

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 sequence = <dnaseq>CTTTTATTTTCTGTTCCTCTAAGGGAAGAGAGACCAAAGAGAATTCTACTTTGACCCTGGCTTAAGAGTGGAACATAGATGTCTATAAAACTATGTGGTACCAGCATGTTATGAAGAATAAGCAAGAAGAAAGAGAAGGAGAAGAAGCAGGAGGAGGAGGAGAGAAGGAAAGGGAGGAGGAGGAGGAGAAAAAGATGGTGGTAGAGGAGGAGGAGAAGAAGAAGAAGGAGGAGAAGGAGAAGGAGAAGAAGGAGCAGGAGGAGGAGGAAGAAGAAGAAGAGGAGAAGGGAACTCACATGCTACCTGTGTGAGTCACATGTCAGTGCAATTTCTGGAGGTCAATTGTAGCCCTGAAGTCTCAGAACAATGGCAAAAAGAAATACGGAGGGCATGATACATTTGGCAGACTAAAATTCTCAAGATTCCTATGCAGTCGAGTTTTACCATATGACTGAGTTCCAACAAAGAAATATGAGTAGAAGATTGTATAAGCATCATTTTTGACCCAGGGCTTTAAGAAGCAGACTATGGAAATGATGTTAGACAAAAAGCAAATTTGAGCAATTTTGTTATTCGGGTTCAAAATGGGTCGTAAAGCAGCAGAGACAACTCTCAAAACATCAGCAACACATTTGGCGCGGGAACTGCTAATGAACGTACAGTGGAGTGGTGGTTCAAGAAGTTTTGCGAAGGAAACGAGAGGCTTGAAGACGAAGAGTGTAGTGGCCAGCCATTGGAAGTAGACAACGACAAATTGAGAGCAATCATTGAAGCTGATCCTCTTACAACTACAGGAGAAGTTGCCAAGGAACTCACCATCAATCATTCTATAGTAGTTTGGCATTTGAAGCAGATCGGAAAGGTGAAAAAGCTTGATAAGTGAATGCCTCATGAACAGAGCAAAAATTTTAAAACATTGTTGTTTTGAAGTGACGTCTTCTCTTATTTTACACAACAATGAACCATTTCTGGATCGAATTATGACATGTGATGAAAAGTGGATTTTATATGACAAGCTGCAAAAACCAGCTCAGTGGTTGGATGGAGAAGAAGCTTCAAAGCACTTCCCAAAGCTGAACTTGCACCAACAAAAGCTCATGGTCACAATTTGGTGGTCTGCCGCCAGCCTGATCTACTACAGCTTTCGGAATCCCAGCGAAACCATTATGTCTGAGAAATATGCTCAGCAAATCGATGAGATGTGCCAAAAACTTCAAGGCCTGCAGCCGGCATTGGTCAACCAAAAGGATCCAATTCTTCTCTACCACAACGCCTGACCACATGTCACATAACCAACCCTTCAAAAGTTGAATAAATTGGTCTACAAAATTGCCTTATCTGCCATATTCACCTGACCTCTCACCAACCAACTACCACTTCTTCAGTTTGTCTCTTCCAGAATCAAAGCTATAAAACTACAAATGGTTCTCCAAATGGAGCCCCAGATGCAGTCCATGACTAAGATCTACTGCGGACCTCTGGACCGGCCTGCTAGCCCAGCTCCCACATTAATGACATCAAAGGCACCCCTCCCGAGGAAATCTCAACTGCATGACACCTACTACGCCCCAATTCAGCAGGAAGCAGTTAGAGTGGTCGTTGGCCAACCTCCCCAACAGCACTTGGGTTTTCTGTTGAGATGGGGGACTGAGAGACAGGACTAGCTGGATTTCCTAGGCCAACTAAGAATCCCTAAGCCTAGCTGGGAAGGTGACTACACCCACCTTTAACCACTAGGCTTGCAACTTAGCTCACACCCGACCAATCAGGTAGTAAAGAGAGCTTGCTAAAATGCTAATTAGGCAAAAACAGGAGGTAAAGAAATAGCCAGTCATCTATCGCCTGACAGCACAAGGGGCGGGACAATGATCAGGATATAAACTCAGGCATTCAAGCCAGCAATGGCTACCCACTTTGGGTCCCCTCCCATTTTATGGGAGCTCTGTTTTCACTCTATTAAATCTTTCAACTACCAAAAAAAAAAAAAAAGAAAAGAAAAACAATTAACTTTTTTATATATCAGTTAAATTCATCCATGATGTTTTTTATGTTTTCTGTATTCTTACTGGTCATTTTTCTATTTGTTCTATCAAGTATCCAGGAATATGTGTTAAAGATGTCCACTTCAATTGTGAATTTCTTGAGTTGTTCTTTCAGTTTTGTTCTTTTTTTACCTTATGCATTTTGAAGTTGTATTATTTCCTGCATACAAATGTAGAATTGTGGTGTCATTCTTTTGGAGTAAACCATGATCATTACTGGCATGACTTACTTACTTACTATCTATCTAGACATGTTGATTGCTTCAATTTCTACTTTAATCTTAATAAAAATACACCAACTTTTT</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-DMRTA1-2]][[Category:NONHSAG051908]]
+[[Category:Intergenic]][[Category:lnc-DMRTA1-2]][[Category:NONHSAG051908]][[Category:ENSG00000234840.1]][[Category:Transcripts]][[Category:Transcripts]]