Difference between revisions of "Lnc-EXOC2-5:4"
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sequence = <dnaseq>CTTGATTGCTGGGCCCTGGTTGAACTCCTTATTAGTAACACCCAGGTTAGTCCTACTTAATTCTTACCTGCAGCCAAAGTGGACTTAGCATCTCCTTGCATGCCTGGTAAAGTCAAGGGTTTTCAGCCAGGGCCTGTGTATAAAGCAGAAGCAGCACAGAGTCTGGTTTGAAGCTTAGTGCTTGGGTTCAGACAGTTGTGGGTTACAATCCCTTCTACACATGTTCTCTGTGGAAACCATTTGGTTCTCTGTGCTTGGAACTCGCCTGCAACGGGACAAAGCCATCTCACCTAGACTGTTGTTATGAAGATTGAATTAGGTGATTCTGAGAGGCATTTATGCGTCCTCCCTGAGTAACAATCCATGAAAAGTGGGCGTCATTGCTGAAGCTCAAGGAAGAAATATGAAATTTGATTATATCCTTATTCACGGCATTGGGTCACCAACTCAGCACTTTTTATGAAAGTAGCATCTGACCTGGCAAAGGCTGTGTCATCTTATTACCTCAGAAAGACAAATTTACGGGGTCAGACGATGGATGGCTTGTAGATTTCTCAATGGGCTGGAAGGAAGGAGAGAAAAAGAGAGACAGGAGAGAGTACACATTTAATTCTGCTTCCCCTAGGGTGATATTTCCTTCCTCCCCTTCCAGGGTTCTCAAAAAGGCATTCTAGGAAGTCCTGTAAAATACATGCTCATAAAAATCTCATAATTTCCACAAATTGTTGAGAATTTAAAACTCGGTTGGGAGTTTGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGCATCTGGGATGAAGCTGAGGAAAGAAGATGTGGGGGCCCTGCTGGCCTGCTCCTTCTCTCGAAAGACGCTTACCGGCTGCTGGTGTGTCACAGGGCTTTAGGATTTGGAAAAACAGAGGGATTTAAAAGAAGATAGAATGGTCAGAATTTCGAGAACTGTGTGCTGAAGTGCCATCTTTAGGGTGCTCATAACACGGCCTTACAACATTAGAGGTGCTGGAATCATGGAAGAGGCATCTGGACTCTGTAATGTCCTTCCCCCTGGAAAATCTGCTCCAGAAGTGGGGGATTGGGAGCTGTCAACATATGAGCCATCTTTTGCTCCGTTCAAGATGGTAGGGGCATTCTCAACATGCCCCTCACTCTGATTCTGCCTCACTTTTATTTTAGAATTTTCCACTGCCTTTTCTGGAATGTGCTTTTTCAACCCTCAAAATCTGTAGAGAAGAAATAAGCAGAAACCGAAATGGCTTTCTGGTGTTCTCCATGCTCTCAGCTTACTGGAAAATCGAGCCGCAGGCTCGAGGCTGGACTTTAAGGCAGAGCACTGCAATTATAGTGCTATGGCCTTGGCTTCCTTTCTCATCACCCAGGTACAGTCCTGCAGTCCTCAGAGGATGCCAGTCCCACACAGGGGGATCCTTCTCCATAGGAAAACCGAGGAACAATGCAGGTTCGAGGTGCACAGTGGCTAAGCACACTCAGTCCTCAAGATCTTTCCTCTCAAATGCTAATGCTACCTTCAGATGGGCTGCTGCCTGCTACCATTTCAACATTGAGTCCTTTAAGATGCCATCAGAGAGAGGGGAAGCAAGAGGCCAAGAAAAATGAAAGGCCCTGCATGTTTTTCTTCGGGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCACAGGAATTCACGTTCAAAGGATGACGCATCTCAGAATCAGGTGGCCTTTAGTGAGCCAGTGGCTCGGATTTATGTGGTCAGATTCTGAGCCGGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGTGAATTTTAGGAAAATGACTCGATAACTGCAACGGTGATGTCATGTGTGTGTCTACTTTAGAGAGCAGATGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGGATCACTGGATCTAAAAGAAAAAATCCAATGAATGATGCATCCCACTGGCATTCCAAAGAGCAAGTAAACAAAAGAAATTATGGGTTTGGGCTCAGAAACCCCAACCCTTGAGATTTCAGAAAACAAAACGAC</dnaseq>| | sequence = <dnaseq>CTTGATTGCTGGGCCCTGGTTGAACTCCTTATTAGTAACACCCAGGTTAGTCCTACTTAATTCTTACCTGCAGCCAAAGTGGACTTAGCATCTCCTTGCATGCCTGGTAAAGTCAAGGGTTTTCAGCCAGGGCCTGTGTATAAAGCAGAAGCAGCACAGAGTCTGGTTTGAAGCTTAGTGCTTGGGTTCAGACAGTTGTGGGTTACAATCCCTTCTACACATGTTCTCTGTGGAAACCATTTGGTTCTCTGTGCTTGGAACTCGCCTGCAACGGGACAAAGCCATCTCACCTAGACTGTTGTTATGAAGATTGAATTAGGTGATTCTGAGAGGCATTTATGCGTCCTCCCTGAGTAACAATCCATGAAAAGTGGGCGTCATTGCTGAAGCTCAAGGAAGAAATATGAAATTTGATTATATCCTTATTCACGGCATTGGGTCACCAACTCAGCACTTTTTATGAAAGTAGCATCTGACCTGGCAAAGGCTGTGTCATCTTATTACCTCAGAAAGACAAATTTACGGGGTCAGACGATGGATGGCTTGTAGATTTCTCAATGGGCTGGAAGGAAGGAGAGAAAAAGAGAGACAGGAGAGAGTACACATTTAATTCTGCTTCCCCTAGGGTGATATTTCCTTCCTCCCCTTCCAGGGTTCTCAAAAAGGCATTCTAGGAAGTCCTGTAAAATACATGCTCATAAAAATCTCATAATTTCCACAAATTGTTGAGAATTTAAAACTCGGTTGGGAGTTTGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGCATCTGGGATGAAGCTGAGGAAAGAAGATGTGGGGGCCCTGCTGGCCTGCTCCTTCTCTCGAAAGACGCTTACCGGCTGCTGGTGTGTCACAGGGCTTTAGGATTTGGAAAAACAGAGGGATTTAAAAGAAGATAGAATGGTCAGAATTTCGAGAACTGTGTGCTGAAGTGCCATCTTTAGGGTGCTCATAACACGGCCTTACAACATTAGAGGTGCTGGAATCATGGAAGAGGCATCTGGACTCTGTAATGTCCTTCCCCCTGGAAAATCTGCTCCAGAAGTGGGGGATTGGGAGCTGTCAACATATGAGCCATCTTTTGCTCCGTTCAAGATGGTAGGGGCATTCTCAACATGCCCCTCACTCTGATTCTGCCTCACTTTTATTTTAGAATTTTCCACTGCCTTTTCTGGAATGTGCTTTTTCAACCCTCAAAATCTGTAGAGAAGAAATAAGCAGAAACCGAAATGGCTTTCTGGTGTTCTCCATGCTCTCAGCTTACTGGAAAATCGAGCCGCAGGCTCGAGGCTGGACTTTAAGGCAGAGCACTGCAATTATAGTGCTATGGCCTTGGCTTCCTTTCTCATCACCCAGGTACAGTCCTGCAGTCCTCAGAGGATGCCAGTCCCACACAGGGGGATCCTTCTCCATAGGAAAACCGAGGAACAATGCAGGTTCGAGGTGCACAGTGGCTAAGCACACTCAGTCCTCAAGATCTTTCCTCTCAAATGCTAATGCTACCTTCAGATGGGCTGCTGCCTGCTACCATTTCAACATTGAGTCCTTTAAGATGCCATCAGAGAGAGGGGAAGCAAGAGGCCAAGAAAAATGAAAGGCCCTGCATGTTTTTCTTCGGGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCACAGGAATTCACGTTCAAAGGATGACGCATCTCAGAATCAGGTGGCCTTTAGTGAGCCAGTGGCTCGGATTTATGTGGTCAGATTCTGAGCCGGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGTGAATTTTAGGAAAATGACTCGATAACTGCAACGGTGATGTCATGTGTGTGTCTACTTTAGAGAGCAGATGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGGATCACTGGATCTAAAAGAAAAAATCCAATGAATGATGCATCCCACTGGCATTCCAAAGAGCAAGTAAACAAAAGAAATTATGGGTTTGGGCTCAGAAACCCCAACCCTTGAGATTTCAGAAAACAAAACGAC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-EXOC2-5]] | + | [[Category:Intergenic]][[Category:lnc-EXOC2-5]][[Category:NONHSAG042552]][[Category:Transcripts]] |
Latest revision as of 04:11, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-EXOC2-5:4 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT106300 |
Classification |
intergenic |
Length |
2177 nt |
Genomic location |
chr6-:958695..1101598 |
Exon number |
5 |
Exons |
958695..958828,962375..962528,998601..998707,1005633..1005763,1099948..1101598 |
Genome context |
|
Sequence |
000001 CTTGATTGCT GGGCCCTGGT TGAACTCCTT ATTAGTAACA CCCAGGTTAG TCCTACTTAA TTCTTACCTG CAGCCAAAGT 000080 000081 GGACTTAGCA TCTCCTTGCA TGCCTGGTAA AGTCAAGGGT TTTCAGCCAG GGCCTGTGTA TAAAGCAGAA GCAGCACAGA 000160 000161 GTCTGGTTTG AAGCTTAGTG CTTGGGTTCA GACAGTTGTG GGTTACAATC CCTTCTACAC ATGTTCTCTG TGGAAACCAT 000240 000241 TTGGTTCTCT GTGCTTGGAA CTCGCCTGCA ACGGGACAAA GCCATCTCAC CTAGACTGTT GTTATGAAGA TTGAATTAGG 000320 000321 TGATTCTGAG AGGCATTTAT GCGTCCTCCC TGAGTAACAA TCCATGAAAA GTGGGCGTCA TTGCTGAAGC TCAAGGAAGA 000400 000401 AATATGAAAT TTGATTATAT CCTTATTCAC GGCATTGGGT CACCAACTCA GCACTTTTTA TGAAAGTAGC ATCTGACCTG 000480 000481 GCAAAGGCTG TGTCATCTTA TTACCTCAGA AAGACAAATT TACGGGGTCA GACGATGGAT GGCTTGTAGA TTTCTCAATG 000560 000561 GGCTGGAAGG AAGGAGAGAA AAAGAGAGAC AGGAGAGAGT ACACATTTAA TTCTGCTTCC CCTAGGGTGA TATTTCCTTC 000640 000641 CTCCCCTTCC AGGGTTCTCA AAAAGGCATT CTAGGAAGTC CTGTAAAATA CATGCTCATA AAAATCTCAT AATTTCCACA 000720 000721 AATTGTTGAG AATTTAAAAC TCGGTTGGGA GTTTGCTGTT TCAGCCTGAG ACACCGGGGT CACGTTTCAG TGCCTGCAGT 000800 000801 CTTGAGACAG TACCAGGCAT CTGGGATGAA GCTGAGGAAA GAAGATGTGG GGGCCCTGCT GGCCTGCTCC TTCTCTCGAA 000880 000881 AGACGCTTAC CGGCTGCTGG TGTGTCACAG GGCTTTAGGA TTTGGAAAAA CAGAGGGATT TAAAAGAAGA TAGAATGGTC 000960 000961 AGAATTTCGA GAACTGTGTG CTGAAGTGCC ATCTTTAGGG TGCTCATAAC ACGGCCTTAC AACATTAGAG GTGCTGGAAT 001040 001041 CATGGAAGAG GCATCTGGAC TCTGTAATGT CCTTCCCCCT GGAAAATCTG CTCCAGAAGT GGGGGATTGG GAGCTGTCAA 001120 001121 CATATGAGCC ATCTTTTGCT CCGTTCAAGA TGGTAGGGGC ATTCTCAACA TGCCCCTCAC TCTGATTCTG CCTCACTTTT 001200 001201 ATTTTAGAAT TTTCCACTGC CTTTTCTGGA ATGTGCTTTT TCAACCCTCA AAATCTGTAG AGAAGAAATA AGCAGAAACC 001280 001281 GAAATGGCTT TCTGGTGTTC TCCATGCTCT CAGCTTACTG GAAAATCGAG CCGCAGGCTC GAGGCTGGAC TTTAAGGCAG 001360 001361 AGCACTGCAA TTATAGTGCT ATGGCCTTGG CTTCCTTTCT CATCACCCAG GTACAGTCCT GCAGTCCTCA GAGGATGCCA 001440 001441 GTCCCACACA GGGGGATCCT TCTCCATAGG AAAACCGAGG AACAATGCAG GTTCGAGGTG CACAGTGGCT AAGCACACTC 001520 001521 AGTCCTCAAG ATCTTTCCTC TCAAATGCTA ATGCTACCTT CAGATGGGCT GCTGCCTGCT ACCATTTCAA CATTGAGTCC 001600 001601 TTTAAGATGC CATCAGAGAG AGGGGAAGCA AGAGGCCAAG AAAAATGAAA GGCCCTGCAT GTTTTTCTTC GGGAAGGCTG 001680 001681 TGCAGTCTGC TCTGAGGAGA CAGATCAACC TAGCCCTTCT CCAGGACGAA CTCCGAAAAC CACAGGAATT CACGTTCAAA 001760 001761 GGATGACGCA TCTCAGAATC AGGTGGCCTT TAGTGAGCCA GTGGCTCGGA TTTATGTGGT CAGATTCTGA GCCGGCAGAC 001840 001841 ACAAGGACAA GCCAGCGAGA GGTGTGGCAG GACTGGAGAT TCTGTGTAGT GAATTTTAGG AAAATGACTC GATAACTGCA 001920 001921 ACGGTGATGT CATGTGTGTG TCTACTTTAG AGAGCAGATG GTCGATCTGG TGCTAATTTG CCCAATACGG TAGCTACGCG 002000 002001 G |