Difference between revisions of "ENST00000436529.2"
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sequence = <dnaseq>AAATAAAAGGATTTGACTTTGGGCTGACAATTTAGCATTTAACCACTGTCTCCGCACCAGTTCCACAAGAGCAGGGATTTAGATTAATTGGAAAAACCTCATTGGTTTCTGATGGAGGGGGCATTCATAGAAACAACCTACTGACAACTAAGGAGCTACTGCGATGGGATGGGCAGCCTGCAGCTTCACTCGGTGGGCAGCCTCCACAGGTATCGTATCTGATTTCAGATACATATGATGGTCTCAAGTGTGTTTTTTACCACCACCACTTTGTAGGCCTGTTGATGCCACTGCTGTTGAAGTCTATGTGAATGGTGCCCCCTGGTGGAAGGAAAAAGAGAATGGGACGCCAGGAATGTCAGATGCTTTTCAGCCTCTCCCCTGCTCTCACGCCTAGAAACAAGAGCTCCACAAAGGTCTCTCATTCCTCAAGGCTGATGAAAAGCCCAGCAGCTAAATGGCCAGAAGCCTGTCTTTGTGAGAAAGCAAGAAGTCTCTCGGTTTGAACTCTTCGGTCTAGAGACAGATTCTTCTACCAGTGGTGTAAAACCCTAAAGAGGCTCTGCATAAGACCTACCACTGCTCTGTGTCTCATGACACCCTGCCCCCACCACTGGAAGGCCACACTTATTCTTTGTGTTCATGCTTCTCTATGATCTGCAAGTTTCCCAAGAACACCTGGATTCGAAGCTCAAGTCCACCGCTAAATAGCTATGTGACCTAATGTGTCAGATGGTTATAAGGATTACAGAGAAAGAGGTATAGATAGAGCTGGTAGCAGTGACAGACACATCTTTACATCATAT</dnaseq>| | sequence = <dnaseq>AAATAAAAGGATTTGACTTTGGGCTGACAATTTAGCATTTAACCACTGTCTCCGCACCAGTTCCACAAGAGCAGGGATTTAGATTAATTGGAAAAACCTCATTGGTTTCTGATGGAGGGGGCATTCATAGAAACAACCTACTGACAACTAAGGAGCTACTGCGATGGGATGGGCAGCCTGCAGCTTCACTCGGTGGGCAGCCTCCACAGGTATCGTATCTGATTTCAGATACATATGATGGTCTCAAGTGTGTTTTTTACCACCACCACTTTGTAGGCCTGTTGATGCCACTGCTGTTGAAGTCTATGTGAATGGTGCCCCCTGGTGGAAGGAAAAAGAGAATGGGACGCCAGGAATGTCAGATGCTTTTCAGCCTCTCCCCTGCTCTCACGCCTAGAAACAAGAGCTCCACAAAGGTCTCTCATTCCTCAAGGCTGATGAAAAGCCCAGCAGCTAAATGGCCAGAAGCCTGTCTTTGTGAGAAAGCAAGAAGTCTCTCGGTTTGAACTCTTCGGTCTAGAGACAGATTCTTCTACCAGTGGTGTAAAACCCTAAAGAGGCTCTGCATAAGACCTACCACTGCTCTGTGTCTCATGACACCCTGCCCCCACCACTGGAAGGCCACACTTATTCTTTGTGTTCATGCTTCTCTATGATCTGCAAGTTTCCCAAGAACACCTGGATTCGAAGCTCAAGTCCACCGCTAAATAGCTATGTGACCTAATGTGTCAGATGGTTATAAGGATTACAGAGAAAGAGGTATAGATAGAGCTGGTAGCAGTGACAGACACATCTTTACATCATAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000228817.3]] | + | [[Category:Intergenic]][[Category:ENSG00000228817.3]][[Category:NONHSAG032626]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 15:33, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000436529.2 |
| Source |
Gencode19 |
| Same with |
NONHSAT081642 |
| Classification |
intergenic |
| Length |
806 nt |
| Genomic location |
chr21+:30743268..30746029 |
| Exon number |
3 |
| Exons |
30743268..30743476,30744755..30744883,30745562..30746029 |
| Genome context |
|
| Sequence |
000001 AAATAAAAGG ATTTGACTTT GGGCTGACAA TTTAGCATTT AACCACTGTC TCCGCACCAG TTCCACAAGA GCAGGGATTT 000080
000081 AGATTAATTG GAAAAACCTC ATTGGTTTCT GATGGAGGGG GCATTCATAG AAACAACCTA CTGACAACTA AGGAGCTACT 000160 000161 GCGATGGGAT GGGCAGCCTG CAGCTTCACT CGGTGGGCAG CCTCCACAGG TATCGTATCT GATTTCAGAT ACATATGATG 000240 000241 GTCTCAAGTG TGTTTTTTAC CACCACCACT TTGTAGGCCT GTTGATGCCA CTGCTGTTGA AGTCTATGTG AATGGTGCCC 000320 000321 CCTGGTGGAA GGAAAAAGAG AATGGGACGC CAGGAATGTC AGATGCTTTT CAGCCTCTCC CCTGCTCTCA CGCCTAGAAA 000400 000401 CAAGAGCTCC ACAAAGGTCT CTCATTCCTC AAGGCTGATG AAAAGCCCAG CAGCTAAATG GCCAGAAGCC TGTCTTTGTG 000480 000481 AGAAAGCAAG AAGTCTCTCG GTTTGAACTC TTCGGTCTAG AGACAGATTC TTCTACCAGT GGTGTAAAAC CCTAAAGAGG 000560 000561 CTCTGCATAA GACCTACCAC TGCTCTGTGT CTCATGACAC CCTGCCCCCA CCACTGGAAG GCCACACTTA TTCTTTGTGT 000640 000641 TCATGCTTCT CTATGATCTG CAAGTTTCCC AAGAACACCT GGATTCGAAG CTCAAGTCCA CCGCTAAATA GCTATGTGAC 000720 000721 CTAATGTGTC AGATGGTTAT AAGGATTACA GAGAAAGAGG TATAGATAGA GCTGGTAGCA GTGACAGACA CATCTTTACA 000800 000801 TCATAT |
Predicted Small Protein
| Name | ENST00000436529.2_smProtein_311:505 |
| Length | 65 |
| Molecular weight | 7073.3283 |
| Aromaticity | 0.03125 |
| Instability index | 85.9484375 |
| Isoelectric point | 10.6791381836 |
| Runs | 7 |
| Runs residual | 0.03921875 |
| Runs probability | 0.0326671209024 |
| Amino acid sequence | MVPPGGRKKRMGRQECQMLFSLSPALTPRNKSSTKVSHSSRLMKSPAAKWPEACLCEKAR SLSV |
| Secondary structure | LLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLHHHHHHHHH HLLL |
| PRMN | - |
| PiMo | - |
