Difference between revisions of "NONHSAT063988"

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sequence = <dnaseq>CTCACTCTAATTTCAGTTTGTTTCCACAATACTCAGAGTAACTTGCTGTTCTTTTTCTTCTTTGTTCCATCCTTTATTCTCCTATGCTCCTTCCTGCAAACTGAGTTTGACCTTTGGATTTTTTTTTTTTTTTTGGTTACACTTCACCCTGTGTGTGACAAATAGAGAGAGAGACAGAGAGAGAGAGGAGTTTTTTTAAATTGCGACATTAATTACCTTTTATTATTGTACACTCCTACTTAATTATTTGGTCTTTAGGGTTGTTCACTATTATTTCCTTGTTATTGTTATATATTTACTGTTGGTTCATTTATTTTGAGATGGATGTCGACTGCATGCATCGCATTTAGCTGCCAGCTTGTCATGTCTAAGATGAACAGACAGCTCTCACCTTGCCATGTCTAAGGTCGACCAGATGGCTCTCGCCTTGCCATATCTAAGGTGGACCAGATGGCACTTGCCTAGCCATGTCTAAGATTGAACAGTTGGTTCTCACCTCATCATATCTAAGGTCAAGTTGGATCTCACCTTGCCATGTTTAAGATTGACCAGATGATTCTCACCTTGCCATATCTAAGGTCGACCAGATGGCTCTCACCTTGCCATGTCTAAGGTCGATCAGATGGCTCTCACCTTGCCATGTCTGAGGTTGACCAGATGGGTCTCCTCTTCGAGTGAGTTCAACAAGATGGCTCTCACCTTGCCATGTCTAAGGTTGACCAGATGGATCTTGCCTTGCCATGTCTAGTGATATTAATTACTTTTTACTTTTGTTAACTGCAACCTGTTTATGTATTGTTCTTTAATTTTTTTGTCATTGTTAAATATTTACTGTTGGATTTGTTTATTTATTTTGAGAGAGATGTCGGCTGTGAGCGTTGGACTAAGGTCGACCTGATGGACCTCACCTCTCGCCTTGCCATGTCTAAGGTCGACCAGATCTCTCTCGCCAGCAGCAGTACAATTCAGGTTGAGCAGAGGGATGGGATCGTGATTCACTGTGGCCTTGATCTTCCTGGTCTCGCCCGGGCGGTCTTCCCAACTGGCCTCCCGTGTCCCTTGGACTACTCAGACCTTCTTCCTCTCTTTTTTCCTAATTCCACTTTCTGTTTGTTTCCATAGTACTTGGAGAGACTTGCTATTCTTTTTTTTCTTTGTTCTTTTCTCTCTCTCTTTTCCTATGCTTCTTCCTGCACGAATGGCAACTCTGCCAAGGCGCCTATGAGAGCCTCTTGGCTTTTACCTGGTCTGCGAGAAATCAAACTTTGGGCACAAGTCATGAAGCCGACAAGCCCGGGAGACACAGTGTCAGAATTACAAGGTGAGATCAGCCGCCCGGCCAAGCTATCTTCTCGCTAGCAGGTAGTAGCATCTTAGCTGCTTCCGGCCGCTGGTCGCAGGGCTGCGGGACTACAATCTTCGCATGAAATGGAAGAGAGGGTGGTGCGGATAGCTTGAGGAAGGTGAACACTACAAGGCCTGTTAGAGAAGAAAGGGTAGAATCCCGAGAATGTTTTCCCCACAGTGCTGATAAGGAGAGACCACTATCCCATCTACTGCTACAGCTCTGGAGACAGAGCTCTCCCACCTGTCATATAGAACACAAGGACCAATCTGCAGAGAAAGAGCATCCAAACCTGATCCAGTGGACACTGGGGAAAAACTCACCACAGCTGAGTGTGGAAAAACAAGGCCAACACACACATCTCTGCACAGATACATCTCCCATAAAGAAACTAAAGTGTTAATTTACAGGGCACTGTTGCAGACCCACTTCAGCTGGAAGCTAGGAACATGGACAAGGAGCCTCTCTACCACCAAGGGAGAGAGAGGAATGTGCTCTTGTCCTGGCATTGCATCCACAGGAGGGGCAGGAAATTCTTTGAAGGTGTTTTCAGATCTCATGACTACTTTATTTTGGAGTTGCCAGACTCAGCAAATAAAAATTCCTCACTATGTCCCCTCAGCTCCTATCTCTGTATGGCCTTTTTTTTCCTAGGTTATGATTATAGAGTGAGGATTATTATAATACTGGAATAAAGAGTAATTGCTACAAACTAATGATTAATGATATTCATATATAATCATATCTAAGATCTATATTTGGTATAACTATTCTTGTTTTATGTTTTATTATACTGGAACAGCTTGTGTCCTTGGTCTCTTGCCTCGGCACCTGGGTGGCTTGCTGCCCACATACAACAATGTTCATATCCTAAACTCCAGAATCTGTGAATATCTTAGGTAATGTGACAAAGGAAAATTAAGATATAGATAGTGTCAAGGTTAACAAGCAGCTGACTTCATGATAAATTATCTTTATCATGAGCAGAAGCCTCACGTAATTAGAAGGGCGCTTAAATATGAAAGAGGGAGAAAAAAAGAAACTTTATCACACTGATGTGATATTAGGTCAACTCAATGCAATATTTTTTTCCTAAGAAAATTTTTGGGGATTATTTTCCCATTAGCATAAAGTTCAGTTCAGTTGTTCAAACACCTGTGATTTATTTTTACATGCATATTACTATGGATGGTGATAATTAAACAAAAAATGCAGAAAATAAAGAAATGCTTTCTGAAGAGTGAGCCCAGGTACTATATTATTATATGAGTATAGAGTCTCGCATCTGGGGCTCGATCTCGTGCAGAGGAGCATTTCCGAAGACACTGGCCGCTCCCACAATGGCTCCGAAGAACCCAGCGACCAGCGGGTTCATGAGTTTGTTGGGGCTGTCCACTCGGTACCAGCTGCGCAGGGATGTCAGGACAAAGAAACAAGTTGCCTGGTTCCAGCCCTGCTTCAGCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCCGCACAATCTCCTAACCCTGTGGAAGAATCCCCTGTACTTGGATTTGGAGAGGTCTGGCCATGGATTAACTTCACCTTGATGGTCTCCATGGGACATAGGACCACCACGGCCTCGGCCACGCTAGCTCACTGGCCGCACCGCTGCCCGCCTTGCTGTTCACCAGTCCCTGGGCATCCCGCATCTGGTTGCTGAGGAACGCCTGACGCCGCCTTGTGGATGAAGCCGCAGAGCAGGGAGCTGAGGCTGCGGCCCAGGCCCAGGCTGCCTTGGCTGCGACTGTGTGCCTGCAGGCCCCATGCCCGGTATCCGGTGGATGCGAGTGCTAGTCCAGCTGCAGCTGCATCTTCACGAACTCGGTGGGGAACGGGATGCAGATTTTTTTTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCAACTTCCTTCCTTCCTTCC</dnaseq>|
 
sequence = <dnaseq>CTCACTCTAATTTCAGTTTGTTTCCACAATACTCAGAGTAACTTGCTGTTCTTTTTCTTCTTTGTTCCATCCTTTATTCTCCTATGCTCCTTCCTGCAAACTGAGTTTGACCTTTGGATTTTTTTTTTTTTTTTGGTTACACTTCACCCTGTGTGTGACAAATAGAGAGAGAGACAGAGAGAGAGAGGAGTTTTTTTAAATTGCGACATTAATTACCTTTTATTATTGTACACTCCTACTTAATTATTTGGTCTTTAGGGTTGTTCACTATTATTTCCTTGTTATTGTTATATATTTACTGTTGGTTCATTTATTTTGAGATGGATGTCGACTGCATGCATCGCATTTAGCTGCCAGCTTGTCATGTCTAAGATGAACAGACAGCTCTCACCTTGCCATGTCTAAGGTCGACCAGATGGCTCTCGCCTTGCCATATCTAAGGTGGACCAGATGGCACTTGCCTAGCCATGTCTAAGATTGAACAGTTGGTTCTCACCTCATCATATCTAAGGTCAAGTTGGATCTCACCTTGCCATGTTTAAGATTGACCAGATGATTCTCACCTTGCCATATCTAAGGTCGACCAGATGGCTCTCACCTTGCCATGTCTAAGGTCGATCAGATGGCTCTCACCTTGCCATGTCTGAGGTTGACCAGATGGGTCTCCTCTTCGAGTGAGTTCAACAAGATGGCTCTCACCTTGCCATGTCTAAGGTTGACCAGATGGATCTTGCCTTGCCATGTCTAGTGATATTAATTACTTTTTACTTTTGTTAACTGCAACCTGTTTATGTATTGTTCTTTAATTTTTTTGTCATTGTTAAATATTTACTGTTGGATTTGTTTATTTATTTTGAGAGAGATGTCGGCTGTGAGCGTTGGACTAAGGTCGACCTGATGGACCTCACCTCTCGCCTTGCCATGTCTAAGGTCGACCAGATCTCTCTCGCCAGCAGCAGTACAATTCAGGTTGAGCAGAGGGATGGGATCGTGATTCACTGTGGCCTTGATCTTCCTGGTCTCGCCCGGGCGGTCTTCCCAACTGGCCTCCCGTGTCCCTTGGACTACTCAGACCTTCTTCCTCTCTTTTTTCCTAATTCCACTTTCTGTTTGTTTCCATAGTACTTGGAGAGACTTGCTATTCTTTTTTTTCTTTGTTCTTTTCTCTCTCTCTTTTCCTATGCTTCTTCCTGCACGAATGGCAACTCTGCCAAGGCGCCTATGAGAGCCTCTTGGCTTTTACCTGGTCTGCGAGAAATCAAACTTTGGGCACAAGTCATGAAGCCGACAAGCCCGGGAGACACAGTGTCAGAATTACAAGGTGAGATCAGCCGCCCGGCCAAGCTATCTTCTCGCTAGCAGGTAGTAGCATCTTAGCTGCTTCCGGCCGCTGGTCGCAGGGCTGCGGGACTACAATCTTCGCATGAAATGGAAGAGAGGGTGGTGCGGATAGCTTGAGGAAGGTGAACACTACAAGGCCTGTTAGAGAAGAAAGGGTAGAATCCCGAGAATGTTTTCCCCACAGTGCTGATAAGGAGAGACCACTATCCCATCTACTGCTACAGCTCTGGAGACAGAGCTCTCCCACCTGTCATATAGAACACAAGGACCAATCTGCAGAGAAAGAGCATCCAAACCTGATCCAGTGGACACTGGGGAAAAACTCACCACAGCTGAGTGTGGAAAAACAAGGCCAACACACACATCTCTGCACAGATACATCTCCCATAAAGAAACTAAAGTGTTAATTTACAGGGCACTGTTGCAGACCCACTTCAGCTGGAAGCTAGGAACATGGACAAGGAGCCTCTCTACCACCAAGGGAGAGAGAGGAATGTGCTCTTGTCCTGGCATTGCATCCACAGGAGGGGCAGGAAATTCTTTGAAGGTGTTTTCAGATCTCATGACTACTTTATTTTGGAGTTGCCAGACTCAGCAAATAAAAATTCCTCACTATGTCCCCTCAGCTCCTATCTCTGTATGGCCTTTTTTTTCCTAGGTTATGATTATAGAGTGAGGATTATTATAATACTGGAATAAAGAGTAATTGCTACAAACTAATGATTAATGATATTCATATATAATCATATCTAAGATCTATATTTGGTATAACTATTCTTGTTTTATGTTTTATTATACTGGAACAGCTTGTGTCCTTGGTCTCTTGCCTCGGCACCTGGGTGGCTTGCTGCCCACATACAACAATGTTCATATCCTAAACTCCAGAATCTGTGAATATCTTAGGTAATGTGACAAAGGAAAATTAAGATATAGATAGTGTCAAGGTTAACAAGCAGCTGACTTCATGATAAATTATCTTTATCATGAGCAGAAGCCTCACGTAATTAGAAGGGCGCTTAAATATGAAAGAGGGAGAAAAAAAGAAACTTTATCACACTGATGTGATATTAGGTCAACTCAATGCAATATTTTTTTCCTAAGAAAATTTTTGGGGATTATTTTCCCATTAGCATAAAGTTCAGTTCAGTTGTTCAAACACCTGTGATTTATTTTTACATGCATATTACTATGGATGGTGATAATTAAACAAAAAATGCAGAAAATAAAGAAATGCTTTCTGAAGAGTGAGCCCAGGTACTATATTATTATATGAGTATAGAGTCTCGCATCTGGGGCTCGATCTCGTGCAGAGGAGCATTTCCGAAGACACTGGCCGCTCCCACAATGGCTCCGAAGAACCCAGCGACCAGCGGGTTCATGAGTTTGTTGGGGCTGTCCACTCGGTACCAGCTGCGCAGGGATGTCAGGACAAAGAAACAAGTTGCCTGGTTCCAGCCCTGCTTCAGCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCCGCACAATCTCCTAACCCTGTGGAAGAATCCCCTGTACTTGGATTTGGAGAGGTCTGGCCATGGATTAACTTCACCTTGATGGTCTCCATGGGACATAGGACCACCACGGCCTCGGCCACGCTAGCTCACTGGCCGCACCGCTGCCCGCCTTGCTGTTCACCAGTCCCTGGGCATCCCGCATCTGGTTGCTGAGGAACGCCTGACGCCGCCTTGTGGATGAAGCCGCAGAGCAGGGAGCTGAGGCTGCGGCCCAGGCCCAGGCTGCCTTGGCTGCGACTGTGTGCCTGCAGGCCCCATGCCCGGTATCCGGTGGATGCGAGTGCTAGTCCAGCTGCAGCTGCATCTTCACGAACTCGGTGGGGAACGGGATGCAGATTTTTTTTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCAACTTCCTTCCTTCCTTCC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG025378]]
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[[Category:Intergenic]][[Category:NONHSAG025378]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 22:52, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT063988

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3277 nt

Genomic location

chr19+:28262750..28297168

Exon number

8

Exons

28262750..28263496,28269458..28269907,28284394..28284560,28284932..28285032,28288662..28289086,28290126..28290182,28293501..28294174,28296513..28297168

Genome context

Sequence
000001 CTCACTCTAA TTTCAGTTTG TTTCCACAAT ACTCAGAGTA ACTTGCTGTT CTTTTTCTTC TTTGTTCCAT CCTTTATTCT 000080
000081 CCTATGCTCC TTCCTGCAAA CTGAGTTTGA CCTTTGGATT TTTTTTTTTT TTTTGGTTAC ACTTCACCCT GTGTGTGACA 000160
000161 AATAGAGAGA GAGACAGAGA GAGAGAGGAG TTTTTTTAAA TTGCGACATT AATTACCTTT TATTATTGTA CACTCCTACT 000240
000241 TAATTATTTG GTCTTTAGGG TTGTTCACTA TTATTTCCTT GTTATTGTTA TATATTTACT GTTGGTTCAT TTATTTTGAG 000320
000321 ATGGATGTCG ACTGCATGCA TCGCATTTAG CTGCCAGCTT GTCATGTCTA AGATGAACAG ACAGCTCTCA CCTTGCCATG 000400
000401 TCTAAGGTCG ACCAGATGGC TCTCGCCTTG CCATATCTAA GGTGGACCAG ATGGCACTTG CCTAGCCATG TCTAAGATTG 000480
000481 AACAGTTGGT TCTCACCTCA TCATATCTAA GGTCAAGTTG GATCTCACCT TGCCATGTTT AAGATTGACC AGATGATTCT 000560
000561 CACCTTGCCA TATCTAAGGT CGACCAGATG GCTCTCACCT TGCCATGTCT AAGGTCGATC AGATGGCTCT CACCTTGCCA 000640
000641 TGTCTGAGGT TGACCAGATG GGTCTCCTCT TCGAGTGAGT TCAACAAGAT GGCTCTCACC TTGCCATGTC TAAGGTTGAC 000720
000721 CAGATGGATC TTGCCTTGCC ATGTCTAGTG ATATTAATTA CTTTTTACTT TTGTTAACTG CAACCTGTTT ATGTATTGTT 000800
000801 CTTTAATTTT TTTGTCATTG TTAAATATTT ACTGTTGGAT TTGTTTATTT ATTTTGAGAG AGATGTCGGC TGTGAGCGTT 000880
000881 GGACTAAGGT CGACCTGATG GACCTCACCT CTCGCCTTGC CATGTCTAAG GTCGACCAGA TCTCTCTCGC CAGCAGCAGT 000960
000961 ACAATTCAGG TTGAGCAGAG GGATGGGATC GTGATTCACT GTGGCCTTGA TCTTCCTGGT CTCGCCCGGG CGGTCTTCCC 001040
001041 AACTGGCCTC CCGTGTCCCT TGGACTACTC AGACCTTCTT CCTCTCTTTT TTCCTAATTC CACTTTCTGT TTGTTTCCAT 001120
001121 AGTACTTGGA GAGACTTGCT ATTCTTTTTT TTCTTTGTTC TTTTCTCTCT CTCTTTTCCT ATGCTTCTTC CTGCACGAAT 001200
001201 GGCAACTCTG CCAAGGCGCC TATGAGAGCC TCTTGGCTTT TACCTGGTCT GCGAGAAATC AAACTTTGGG CACAAGTCAT 001280
001281 GAAGCCGACA AGCCCGGGAG ACACAGTGTC AGAATTACAA GGTGAGATCA GCCGCCCGGC CAAGCTATCT TCTCGCTAGC 001360
001361 AGGTAGTAGC ATCTTAGCTG CTTCCGGCCG CTGGTCGCAG GGCTGCGGGA CTACAATCTT CGCATGAAAT GGAAGAGAGG 001440
001441 GTGGTGCGGA TAGCTTGAGG AAGGTGAACA CTACAAGGCC TGTTAGAGAA GAAAGGGTAG AATCCCGAGA ATGTTTTCCC 001520
001521 CACAGTGCTG ATAAGGAGAG ACCACTATCC CATCTACTGC TACAGCTCTG GAGACAGAGC TCTCCCACCT GTCATATAGA 001600
001601 ACACAAGGAC CAATCTGCAG AGAAAGAGCA TCCAAACCTG ATCCAGTGGA CACTGGGGAA AAACTCACCA CAGCTGAGTG 001680
001681 TGGAAAAACA AGGCCAACAC ACACATCTCT GCACAGATAC ATCTCCCATA AAGAAACTAA AGTGTTAATT TACAGGGCAC 001760
001761 TGTTGCAGAC CCACTTCAGC TGGAAGCTAG GAACATGGAC AAGGAGCCTC TCTACCACCA AGGGAGAGAG AGGAATGTGC 001840
001841 TCTTGTCCTG GCATTGCATC CACAGGAGGG GCAGGAAATT CTTTGAAGGT GTTTTCAGAT CTCATGACTA CTTTATTTTG 001920
001921 GAGTTGCCAG AC