Difference between revisions of "NONHSAT034976"
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sequence = <dnaseq>TGTGAAGGTCATGGACAGTGTAATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAAGCTCGGATCTGCCTTGCTCTGGGAGGGGTAAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGATGATCGCCGCTGTGAAGACCTCGATGGTGTGGTCTGTGGAGGTAGTAACCTTTCTCATAGCTGTATGCTACCTGCATGCAACTTGCTTTACCTGCCTTTGTTATTCTACTGACTCTTGCTTTTTCAATTGCTGTTAAAAATAAGATAAACAGAAAGCAATATACCATTGAACCTAAAAGCAATATACAATTAGGTTTGTAATGACTTTTATTTCCCTGAACTCTTTATTTAGCAGGTATGTGAAAGTACGCAGTACACTATCAATAAAAGATCATTGAATCTAA</dnaseq>| | sequence = <dnaseq>TGTGAAGGTCATGGACAGTGTAATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAAGCTCGGATCTGCCTTGCTCTGGGAGGGGTAAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGATGATCGCCGCTGTGAAGACCTCGATGGTGTGGTCTGTGGAGGTAGTAACCTTTCTCATAGCTGTATGCTACCTGCATGCAACTTGCTTTACCTGCCTTTGTTATTCTACTGACTCTTGCTTTTTCAATTGCTGTTAAAAATAAGATAAACAGAAAGCAATATACCATTGAACCTAAAAGCAATATACAATTAGGTTTGTAATGACTTTTATTTCCCTGAACTCTTTATTTAGCAGGTATGTGAAAGTACGCAGTACACTATCAATAAAAGATCATTGAATCTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG014087]] | + | [[Category:Sense]][[Category:NONHSAG014087]][[Category:Transcripts]] |
Latest revision as of 21:29, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT034976 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
514 nt |
| Genomic location |
chr13+:102250496..102345294 |
| Exon number |
2 |
| Exons |
102250496..102250649,102344935..102345294 |
| Genome context |
|
| Sequence |
000001 TGTGAAGGTC ATGGACAGTG TAATTGCGGA AGATGTGACT GCAAAGCAGG CTGGTATGGG AAGAAGTGTG AGCACCCACA 000080
000081 GTCCTGCACG CTGTCAGCTG AGGAGAGCAT CAGGAAGTGC CAGGGAAGCT CGGATCTGCC TTGCTCTGGG AGGGGTAAAT 000160 000161 GTGAATGTGG CAAATGCACC TGCTATCCTC CAGGAGATCG CCGGGTGTAT GGCAAGACTT GTGAGTGTGA TGATCGCCGC 000240 000241 TGTGAAGACC TCGATGGTGT GGTCTGTGGA GGTAGTAACC TTTCTCATAG CTGTATGCTA CCTGCATGCA ACTTGCTTTA 000320 000321 CCTGCCTTTG TTATTCTACT GACTCTTGCT TTTTCAATTG CTGTTAAAAA TAAGATAAAC AGAAAGCAAT ATACCATTGA 000400 000401 ACCTAAAAGC AATATACAAT TAGGTTTGTA ATGACTTTTA TTTCCCTGAA CTCTTTATTT AGCAGGTATG TGAAAGTACG 000480 000481 CAGTACACTA TCAATAAAAG ATCATTGAAT CTAA |
Predicted Small Protein
| Name | NONHSAT034976_smProtein_305:430 |
| Length | 42 |
| Molecular weight | 4599.5253 |
| Aromaticity | 0.0731707317073 |
| Instability index | 53.0 |
| Isoelectric point | 10.171081543 |
| Runs | 5 |
| Runs residual | 0.054017656741 |
| Runs probability | 0.0605193428723 |
| Amino acid sequence | MQLALPAFVILLTLAFSIAVKNKINRKQYTIEPKSNIQLGL |
| Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHLLLEEEEELLLLLLLLL |
| PRMN | LLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
| PiMo | i???????????????????????????????????????? |
