Difference between revisions of "Lnc-GPRC5A-2:10"

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sequence = <dnaseq>GAGCTGGGGACATATGAGCAAAGACAGGCGATGTGATCAGTCCTGTGCCTTAGGCAGGTGGTGATAAAAGGACACTTTAGAAGGGTCAGAAATGGGAGAGCTGGAAGCCAATACCATGGCAATCATTTGTGCAAGAGATGATGAAGACCTGTGTAGATGGAAGGGAAGGAAGGGACAGCTGGGAGCTGACCAGGATGAGCCAATAATTAGATGCAGAAGTGAAGGAGTCAGAATGACATTGGAACAGGGTGGGTAGGAGGAGGGAGGGGACCATCACTAAGACAGAGAACACAGAAAGGGATCTGATTTTGCGTGGAAATCTGCGTTGTGTTTTGGACATGCTGATTTGGGAGATACTTGAGGTGGTGATGCCTCCTGGGAGCTGGAAATATAAGGCTGGTGCTTAGGAGAGAAGGCAGCATGAGACGTGTTGACCCGGGCATCATCTACAGAGAAACAGCCTGAAGCCCTTGCCTGGTGGGAGTTTATAAAAGACTTACGGGATAACTGACAGCTATCAGGGGGAGAGAAAATGGTGATTAATTAGGCTGAGACACAGAATCTTATCATTGGCAAGGCTTTTGGACATGAGGTGGCTTAAATATTAGAGATATTTAATAAATGTTTGTCAAATCAAACCAAACTTCCCACCTAGTGCAAATGTCACATGGCATAAGTGTCACCCATCTATCCAGATGGCACTTGAATTCTTCCAGGGGCAAGGACATTACCTCATGACGTCCATTTTACTGTTAGACACCTAAAATAGTTCCTGGTACAGAGTAAGTGAACAAGAAATCCACTATCTTTTGAATGAAGGAATGAACGAGTGGGTAAATCACATTGTCTCAGGCTCCATGCTGAGTCTGATGGGATGGCAAGACATTCAGGGGAGACAGACAGAGGTTAGGCTGGAAAGTTACCAACACACTGGTGACAGCTGAAGCTATGATGGGGACCAAGATCTTTATGGGACAGAGCAGAGAGAGAGAAGCACAGGAGAGGCAAGGATGAAGCTCTTTTGTTCATGTATCCATTCACCAACTTGTTTTTGTTTTTTATTTAGAGACGGGGTCTCATTATGTTGCCCAGGCTGGTCTCGAACTCCTAAGCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTACTAGAATTACAGATGTCAGCCACTGTGATGGCCAATTCAACAGCTTCTTATTGAACACTTGTTATATTCTAGCCAAAGGCCCTGCCCTTGGGAAGCTTGCATTCTAGTGGGGAGAGGGCAATAAATAAATGAGCAGATAGAGATATATAATGCAATTGATTATAAGTGAAGCAAAGCAAAATAAAGCTGGATAAGAGGACAGAAAAGGACAGGGTGCTATTTTCAATAGAACGGCTGGACAAGGCCCCTTTTAATCAAAGTGAGGGGGCAAAGCAGGGTGCTAAGACTGAAAACCCTTGGTCCCAACTTCCTGTGGTTACAAACAGGGTTGAATTATCTAGGAACATGGGCAAACACTGGTCTGTAAATCTCCTAAGTGGTAATGTGGGAACCCCCTAAGAGTTTAGCAGTTGAGCTCTTTCTTCCAAACTTCTCTTTCTCTAGGCGGAACTTCCCAAGCTGCCAATGGCCTCCATTGGGGCCTGGTCATTTAGAGGGAAAAATGACATCAGCAACCTAGGTGCTGACAGCTGACAAAGTTCTTTCAAATGCACAATGAAACCGGCCTTTGCAATCATGCCTTAGAAATCTTATTTTATAGATGAGAAAACTGAGGCTCAGAAAGATTAAACAACTTGCTGCAAGTTACAAAATTCATAATTATTGGAGCTGAGGTTCTAACCCAAGTGTATCTGCAGTAACTTTGACTTTTTTATTGTTAATTCTAATAAAACTTGATCAAATTCTCAAAGGGAGGTGAAGTTAGGAGGAGGAGAATAGGCTAACATTTACTGAGTGTCTACCTCATGTCTAGGATTGAGTAGGTATTTACAGGTATTATCATATTTTATCCTCACAACACCATAAAAGCTAGGTACTCATGCCCATCTTACAGATGAGGAAACTGAGGTACAGTGAGGCTGGCAATATACCAAAGGTCCTATGGCCACTGAATGATGAACTGGGTTGGAGCATAGGTTACCCTGAAAATAAACTCCTGGTTTCCAACTTTTTCCTTTATATCTAGACATTTCATTTAAACCGTGAAAGTTTCATTAAGACCATCAAACTTCTCCTGCTGTTGGTCCCTATTGAGAACCTGGTGCTGAAATGAGCTGAAAAGGCCAAACTCTAACTTAAGTGCATAGAGAAAGGACAGTAGTCTGGAATGTTGCTGCTGGTCTAAGTGTGAGGATAATTCTATTGCCTCTTGTGAATACTAAACATATTCTGATAGTGCTATTTTTTTTCACAGCATTCTATTCATCTAAAAGCACCGGTAATTAACGATGCTAATAAATGTATAATCCCTTTGTAAACATCTCTTCACAAGGTCATAAAGAAGGAAGACTG</dnaseq>|
 
sequence = <dnaseq>GAGCTGGGGACATATGAGCAAAGACAGGCGATGTGATCAGTCCTGTGCCTTAGGCAGGTGGTGATAAAAGGACACTTTAGAAGGGTCAGAAATGGGAGAGCTGGAAGCCAATACCATGGCAATCATTTGTGCAAGAGATGATGAAGACCTGTGTAGATGGAAGGGAAGGAAGGGACAGCTGGGAGCTGACCAGGATGAGCCAATAATTAGATGCAGAAGTGAAGGAGTCAGAATGACATTGGAACAGGGTGGGTAGGAGGAGGGAGGGGACCATCACTAAGACAGAGAACACAGAAAGGGATCTGATTTTGCGTGGAAATCTGCGTTGTGTTTTGGACATGCTGATTTGGGAGATACTTGAGGTGGTGATGCCTCCTGGGAGCTGGAAATATAAGGCTGGTGCTTAGGAGAGAAGGCAGCATGAGACGTGTTGACCCGGGCATCATCTACAGAGAAACAGCCTGAAGCCCTTGCCTGGTGGGAGTTTATAAAAGACTTACGGGATAACTGACAGCTATCAGGGGGAGAGAAAATGGTGATTAATTAGGCTGAGACACAGAATCTTATCATTGGCAAGGCTTTTGGACATGAGGTGGCTTAAATATTAGAGATATTTAATAAATGTTTGTCAAATCAAACCAAACTTCCCACCTAGTGCAAATGTCACATGGCATAAGTGTCACCCATCTATCCAGATGGCACTTGAATTCTTCCAGGGGCAAGGACATTACCTCATGACGTCCATTTTACTGTTAGACACCTAAAATAGTTCCTGGTACAGAGTAAGTGAACAAGAAATCCACTATCTTTTGAATGAAGGAATGAACGAGTGGGTAAATCACATTGTCTCAGGCTCCATGCTGAGTCTGATGGGATGGCAAGACATTCAGGGGAGACAGACAGAGGTTAGGCTGGAAAGTTACCAACACACTGGTGACAGCTGAAGCTATGATGGGGACCAAGATCTTTATGGGACAGAGCAGAGAGAGAGAAGCACAGGAGAGGCAAGGATGAAGCTCTTTTGTTCATGTATCCATTCACCAACTTGTTTTTGTTTTTTATTTAGAGACGGGGTCTCATTATGTTGCCCAGGCTGGTCTCGAACTCCTAAGCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTACTAGAATTACAGATGTCAGCCACTGTGATGGCCAATTCAACAGCTTCTTATTGAACACTTGTTATATTCTAGCCAAAGGCCCTGCCCTTGGGAAGCTTGCATTCTAGTGGGGAGAGGGCAATAAATAAATGAGCAGATAGAGATATATAATGCAATTGATTATAAGTGAAGCAAAGCAAAATAAAGCTGGATAAGAGGACAGAAAAGGACAGGGTGCTATTTTCAATAGAACGGCTGGACAAGGCCCCTTTTAATCAAAGTGAGGGGGCAAAGCAGGGTGCTAAGACTGAAAACCCTTGGTCCCAACTTCCTGTGGTTACAAACAGGGTTGAATTATCTAGGAACATGGGCAAACACTGGTCTGTAAATCTCCTAAGTGGTAATGTGGGAACCCCCTAAGAGTTTAGCAGTTGAGCTCTTTCTTCCAAACTTCTCTTTCTCTAGGCGGAACTTCCCAAGCTGCCAATGGCCTCCATTGGGGCCTGGTCATTTAGAGGGAAAAATGACATCAGCAACCTAGGTGCTGACAGCTGACAAAGTTCTTTCAAATGCACAATGAAACCGGCCTTTGCAATCATGCCTTAGAAATCTTATTTTATAGATGAGAAAACTGAGGCTCAGAAAGATTAAACAACTTGCTGCAAGTTACAAAATTCATAATTATTGGAGCTGAGGTTCTAACCCAAGTGTATCTGCAGTAACTTTGACTTTTTTATTGTTAATTCTAATAAAACTTGATCAAATTCTCAAAGGGAGGTGAAGTTAGGAGGAGGAGAATAGGCTAACATTTACTGAGTGTCTACCTCATGTCTAGGATTGAGTAGGTATTTACAGGTATTATCATATTTTATCCTCACAACACCATAAAAGCTAGGTACTCATGCCCATCTTACAGATGAGGAAACTGAGGTACAGTGAGGCTGGCAATATACCAAAGGTCCTATGGCCACTGAATGATGAACTGGGTTGGAGCATAGGTTACCCTGAAAATAAACTCCTGGTTTCCAACTTTTTCCTTTATATCTAGACATTTCATTTAAACCGTGAAAGTTTCATTAAGACCATCAAACTTCTCCTGCTGTTGGTCCCTATTGAGAACCTGGTGCTGAAATGAGCTGAAAAGGCCAAACTCTAACTTAAGTGCATAGAGAAAGGACAGTAGTCTGGAATGTTGCTGCTGGTCTAAGTGTGAGGATAATTCTATTGCCTCTTGTGAATACTAAACATATTCTGATAGTGCTATTTTTTTTCACAGCATTCTATTCATCTAAAAGCACCGGTAATTAACGATGCTAATAAATGTATAATCCCTTTGTAAACATCTCTTCACAAGGTCATAAAGAAGGAAGACTG</dnaseq>|
 
}}
 
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[[Category:Intronic(AS)]][[Category:lnc-GPRC5A-2]]
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[[Category:Intronic(AS)]][[Category:lnc-GPRC5A-2]][[Category:Transcripts]]

Latest revision as of 04:22, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-GPRC5A-2:10

Source

LNCipedia2.1

Same with

,

Classification

intronic(AS)

Length

2500 nt

Genomic location

chr12+:13133564..13136375

Exon number

2

Exons

13133564..13133586,13133899..13136375

Genome context

Sequence
000001 GAGCTGGGGA CATATGAGCA AAGACAGGCG ATGTGATCAG TCCTGTGCCT TAGGCAGGTG GTGATAAAAG GACACTTTAG 000080
000081 AAGGGTCAGA AATGGGAGAG CTGGAAGCCA ATACCATGGC AATCATTTGT GCAAGAGATG ATGAAGACCT GTGTAGATGG 000160
000161 AAGGGAAGGA AGGGACAGCT GGGAGCTGAC CAGGATGAGC CAATAATTAG ATGCAGAAGT GAAGGAGTCA GAATGACATT 000240
000241 GGAACAGGGT GGGTAGGAGG AGGGAGGGGA CCATCACTAA GACAGAGAAC ACAGAAAGGG ATCTGATTTT GCGTGGAAAT 000320
000321 CTGCGTTGTG TTTTGGACAT GCTGATTTGG GAGATACTTG AGGTGGTGAT GCCTCCTGGG AGCTGGAAAT ATAAGGCTGG 000400
000401 TGCTTAGGAG AGAAGGCAGC ATGAGACGTG TTGACCCGGG CATCATCTAC AGAGAAACAG CCTGAAGCCC TTGCCTGGTG 000480
000481 GGAGTTTATA AAAGACTTAC GGGATAACTG ACAGCTATCA GGGGGAGAGA AAATGGTGAT TAATTAGGCT GAGACACAGA 000560
000561 ATCTTATCAT TGGCAAGGCT TTTGGACATG AGGTGGCTTA AATATTAGAG ATATTTAATA AATGTTTGTC AAATCAAACC 000640
000641 AAACTTCCCA CCTAGTGCAA ATGTCACATG GCATAAGTGT CACCCATCTA TCCAGATGGC ACTTGAATTC TTCCAGGGGC 000720
000721 AAGGACATTA CCTCATGACG TCCATTTTAC TGTTAGACAC CTAAAATAGT TCCTGGTACA GAGTAAGTGA ACAAGAAATC 000800
000801 CACTATCTTT TGAATGAAGG AATGAACGAG TGGGTAAATC ACATTGTCTC AGGCTCCATG CTGAGTCTGA TGGGATGGCA 000880
000881 AGACATTCAG GGGAGACAGA CAGAGGTTAG GCTGGAAAGT TACCAACACA CTGGTGACAG CTGAAGCTAT GATGGGGACC 000960
000961 AAGATCTTTA TGGGACAGAG CAGAGAGAGA GAAGCACAGG AGAGGCAAGG ATGAAGCTCT TTTGTTCATG TATCCATTCA 001040
001041 CCAACTTGTT TTTGTTTTTT ATTTAGAGAC GGGGTCTCAT TATGTTGCCC AGGCTGGTCT CGAACTCCTA AGCTCAGGTG 001120
001121 ATCCACCTGC CTTGGCCTCC CAAAGTACTA GAATTACAGA TGTCAGCCAC TGTGATGGCC AATTCAACAG CTTCTTATTG 001200
001201 AACACTTGTT ATATTCTAGC CAAAGGCCCT GCCCTTGGGA AGCTTGCATT CTAGTGGGGA GAGGGCAATA AATAAATGAG 001280
001281 CAGATAGAGA TATATAATGC AATTGATTAT AAGTGAAGCA AAGCAAAATA AAGCTGGATA AGAGGACAGA AAAGGACAGG 001360
001361 GTGCTATTTT CAATAGAACG GCTGGACAAG GCCCCTTTTA ATCAAAGTGA GGGGGCAAAG CAGGGTGCTA AGACTGAAAA 001440
001441 CCCTTGGTCC CAACTTCCTG TGGTTACAAA CAGGGTTGAA TTATCTAGGA ACATGGGCAA ACACTGGTCT GTAAATCTCC 001520
001521 TAAGTGGTAA TGTGGGAACC CCCTAAGAGT TTAGCAGTTG AGCTCTTTCT TCCAAACTTC TCTTTCTCTA GGCGGAACTT 001600
001601 CCCAAGCTGC CAATGGCCTC CATTGGGGCC TGGTCATTTA GAGGGAAAAA TGACATCAGC AACCTAGGTG CTGACAGCTG 001680
001681 ACAAAGTTCT TTCAAATGCA CAATGAAACC GGCCTTTGCA ATCATGCCTT AGAAATCTTA TTTTATAGAT GAGAAAACTG 001760
001761 AGGCTCAGAA AGATTAAACA ACTTGCTGCA AGTTACAAAA TTCATAATTA TTGGAGCTGA GGTTCTAACC CAAGTGTATC 001840
001841 TGCAGTAACT TTGACTTTTT TATTGTTAAT TCTAATAAAA CTTGATCAAA TTCTCAAAGG GAGGTGAAGT TAGGAGGAGG 001920
001921 AGAATAGGCT AACATTTACT GAGTGTCTAC CTCATGTCTA GGATTGAGTA GGTATTTACA GGTATTATCA TATTTTATCC 002000
002001 TCACAACACC ATAAAAGCTA GGTACTCATG CCCATCTTAC AGATGAGGAA ACTGAGGTAC AGTGAGGCTG GCAATATACC 002080
002081 AAAGGTCCTA TGGCCACTGA ATGATGAACT GGGTTGGAGC ATAGGTTACC CTGAAAATAA ACTCCTGGTT TCCAACTTTT 002160
002161 TCCTTTATAT CTAGACATTT CATTTAAACC GTGAAAGTTT CATTAAGACC ATCAAACTTC TCCTGCTGTT GGTCCCTATT 002240
002241 GAGAACCTGG TGCTGAAATG AGCTGAAAAG GCCAAACTCT AACTTAAGTG CATAGAGAAA GGACAGTAGT CTGGAATGTT 002320
002321 GCTGCTGGTC TAAGTGTGAG GATAATTCTA TTGCCTCTTG TGAATACTAA ACATATTCTG ATAGTGCTAT TTTTTTTCAC 002400
002401 AGCATTCTAT TCATCTAAAA GCACCGGTAA TTAACGATGC TAATAAATGT ATAATCCCTT TGTAAACATC TCTTCACAAG 002480
002481 GTCATAAAGA AGGAAGACTG
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