Difference between revisions of "NONHSAT011510"
| (One intermediate revision by one other user not shown) | |||
| Line 42: | Line 42: | ||
sequence = <dnaseq>GGAAGCACATTCAAAGATGTAGATCCCCTCAGAGAAGTTTTCCATTTCCCTGAAGTTAAAGATCTTCAAATGACTGCAAATAACATGAGGATATATAGAAAAATGCCCTTCCCCAATTTCCAAATCGTGAAAATTTGGCTCAGCAGGTGTACACTTAAAGCGTTCTGGGAATATGAATCCCTTCTGCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTGGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCTGCCGGGTCCCGGCCAGGAACAACTGGATGTTGTAAATGTTTCTCATCTGGCCTTAAAATCCATGAAAGCTGGAAAATCACAAGGCATCTGTGCATATACTGGTGGATTTTAATGAGAGTCCTGTGTTTGGAGCACCAGAAATAAACCAGCTTCAGAAGCAAAGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCC</dnaseq>| | sequence = <dnaseq>GGAAGCACATTCAAAGATGTAGATCCCCTCAGAGAAGTTTTCCATTTCCCTGAAGTTAAAGATCTTCAAATGACTGCAAATAACATGAGGATATATAGAAAAATGCCCTTCCCCAATTTCCAAATCGTGAAAATTTGGCTCAGCAGGTGTACACTTAAAGCGTTCTGGGAATATGAATCCCTTCTGCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTGGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCTGCCGGGTCCCGGCCAGGAACAACTGGATGTTGTAAATGTTTCTCATCTGGCCTTAAAATCCATGAAAGCTGGAAAATCACAAGGCATCTGTGCATATACTGGTGGATTTTAATGAGAGTCCTGTGTTTGGAGCACCAGAAATAAACCAGCTTCAGAAGCAAAGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:NONHSAG005273]] | + | [[Category:Antisense]][[Category:NONHSAG005273]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:03, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT011510 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
712 nt |
| Genomic location |
chr10+:13674680..13697482 |
| Exon number |
6 |
| Exons |
13674680..13674825,13686917..13687074,13690085..13690230,13694408..13694489,13696353..13696427,13697378..13697482 |
| Genome context |
|
| Sequence |
000001 GGAAGCACAT TCAAAGATGT AGATCCCCTC AGAGAAGTTT TCCATTTCCC TGAAGTTAAA GATCTTCAAA TGACTGCAAA 000080
000081 TAACATGAGG ATATATAGAA AAATGCCCTT CCCCAATTTC CAAATCGTGA AAATTTGGCT CAGCAGGTGT ACACTTAAAG 000160 000161 CGTTCTGGGA ATATGAATCC CTTCTGCACC CTGGAATCAC CAGTCCAGCC ATGCATGGAG CTGGGGAAAG CAGGCCCTGA 000240 000241 ATTGTCTAGA GAGACTTGGT GGAGGAGGCC ACGGCCCGCC TTGTCCCTGC CGGGTCCCGG CCAGGAACAA CTGGATGTTG 000320 000321 TAAATGTTTC TCATCTGGCC TTAAAATCCA TGAAAGCTGG AAAATCACAA GGCATCTGTG CATATACTGG TGGATTTTAA 000400 000401 TGAGAGTCCT GTGTTTGGAG CACCAGAAAT AAACCAGCTT CAGAAGCAAA GTGAGACTGG GCATGATTCA GAAAAGTTGG 000480 000481 AAGATCTAGA GAGGGATCTT GCAATCTGAA GTTTCTTGTT TAGTCACTGG AGGATCTGAA CGTCTATGAC ACTCTTTCGA 000560 000561 GCTGACACAG TGAAGAACAT AGAAGGAGAA CTCACCCAGT CTGCCAGGGT CACAGAATGA TCATACTCAA GATCTTCCTG 000640 000641 GGGAGTCAAT GGCAAATTTC ACTGGGCTAT TTTACAGATG AAGAAGGAAC ATAAAGAAGG TTCTGGGACC CC |
Predicted Small Protein
| Name | NONHSAT011510_smProtein_545:619 |
| Length | 25 |
| Molecular weight | 2710.0248 |
| Aromaticity | 0.0416666666667 |
| Instability index | 50.5125 |
| Isoelectric point | 5.05877685547 |
| Runs | 5 |
| Runs residual | 0.0267857142857 |
| Runs probability | 0.0490902667374 |
| Amino acid sequence | MTLFRADTVKNIEGELTQSARVTE |
| Secondary structure | LEEEEELLHHHHHHHHLLLLLLLL |
| PRMN | - |
| PiMo | - |
